RNA–Protein interactions for RNA: ENST00000560754.1

RNF31-223, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-223	ENST00000560754	INTS14	Q96SY0	518 aa		11.19	□□□□□ -0.62
RNF31-223	ENST00000560754	FAM107B	Q9H098	131 aa		11.19	□□□□□ -0.62
RNF31-223	ENST00000560754	WDR13	Q9H1Z4	485 aa		11.19	□□□□□ -0.62
RNF31-223	ENST00000560754	OR10A2	Q9H208	303 aa		11.19	□□□□□ -0.62
RNF31-223	ENST00000560754	ZNRD1	Q9P1U0	126 aa		11.19	□□□□□ -0.62
RNF31-223	ENST00000560754		A0A0G2JK05	382 aa		11.18	□□□□□ -0.62
RNF31-223	ENST00000560754	FAM183A	A6NL82	134 aa		11.18	□□□□□ -0.62
RNF31-223	ENST00000560754	TMEM210	A6NLX4	147 aa		11.18	□□□□□ -0.62
RNF31-223	ENST00000560754	RIIAD1	A6NNX1	92 aa		11.18	□□□□□ -0.62
RNF31-223	ENST00000560754	SOX14	O95416	240 aa		11.18	□□□□□ -0.62
RNF31-223	ENST00000560754	ACAA1	P09110	424 aa	Predicted RBP	11.18	□□□□□ -0.62
RNF31-223	ENST00000560754	ZNF3	P17036	446 aa		11.18	□□□□□ -0.62
RNF31-223	ENST00000560754	ATP6V1B2	P21281	511 aa		11.18	□□□□□ -0.62
RNF31-223	ENST00000560754	ACKR3	P25106	362 aa		11.18	□□□□□ -0.62
RNF31-223	ENST00000560754	GSTT1	P30711	240 aa		11.18	□□□□□ -0.62
RNF31-223	ENST00000560754	DCTD	P32321	178 aa		11.18	□□□□□ -0.62
RNF31-223	ENST00000560754	GNAL	P38405	381 aa		11.18	□□□□□ -0.62
RNF31-223	ENST00000560754	MNAT1	P51948	309 aa		11.18	□□□□□ -0.62
RNF31-223	ENST00000560754	UBE2E1	P51965	193 aa		11.18	□□□□□ -0.62
RNF31-223	ENST00000560754	CAV3	P56539	151 aa		11.18	□□□□□ -0.62
RNF31-223	ENST00000560754	MXRA7	P84157	204 aa		11.18	□□□□□ -0.62
RNF31-223	ENST00000560754	TRIM25	Q14258	630 aa	Known RBP	11.18	□□□□□ -0.62
RNF31-223	ENST00000560754	LRRC10	Q5BKY1	277 aa		11.18	□□□□□ -0.62
RNF31-223	ENST00000560754	ERI1	Q8IV48	349 aa	Known RBP	11.18	□□□□□ -0.62
RNF31-223	ENST00000560754	ARHGAP24	Q8N264	748 aa		11.18	□□□□□ -0.62
RNF31-223	ENST00000560754	FTMT	Q8N4E7	242 aa		11.18	□□□□□ -0.62
RNF31-223	ENST00000560754	ITFG2	Q969R8	447 aa		11.18	□□□□□ -0.62
RNF31-223	ENST00000560754	NIPSNAP1	Q9BPW8	284 aa		11.18	□□□□□ -0.62
RNF31-223	ENST00000560754	MICU1	Q9BPX6	476 aa		11.18	□□□□□ -0.62
RNF31-223	ENST00000560754	MED20	Q9H944	212 aa		11.18	□□□□□ -0.62
RNF31-223	ENST00000560754	TCF7L1	Q9HCS4	588 aa		11.18	□□□□□ -0.62
RNF31-223	ENST00000560754	ARMC1	Q9NVT9	282 aa		11.18	□□□□□ -0.62
RNF31-223	ENST00000560754	ONECUT1	Q9UBC0	465 aa		11.18	□□□□□ -0.62
RNF31-223	ENST00000560754	VPREB3	Q9UKI3	123 aa		11.18	□□□□□ -0.62
RNF31-223	ENST00000560754	ARL2BP	Q9Y2Y0	163 aa		11.18	□□□□□ -0.62
RNF31-223	ENST00000560754		U3KQV3	271 aa		11.18	□□□□□ -0.62
RNF31-223	ENST00000560754	ZNF816-ZNF321P	A0A0X1KG74	233 aa		11.17	□□□□□ -0.62
RNF31-223	ENST00000560754	SLC22A31	A6NKX4	558 aa		11.17	□□□□□ -0.62
RNF31-223	ENST00000560754	ANXA2P2	A6NMY6	339 aa		11.17	□□□□□ -0.62
RNF31-223	ENST00000560754	NPFF	O15130	113 aa		11.17	□□□□□ -0.62
RNF31-223	ENST00000560754	H2BFM	P0C1H6	154 aa		11.17	□□□□□ -0.62
RNF31-223	ENST00000560754	EEF1B2	P24534	225 aa	Known RBP	11.17	□□□□□ -0.62
RNF31-223	ENST00000560754	MS4A2	Q01362	244 aa		11.17	□□□□□ -0.62
RNF31-223	ENST00000560754	ACSM1	Q08AH1	577 aa		11.17	□□□□□ -0.62
RNF31-223	ENST00000560754	PRDX4	Q13162	271 aa		11.17	□□□□□ -0.62
RNF31-223	ENST00000560754	GK3P	Q14409	553 aa		11.17	□□□□□ -0.62
RNF31-223	ENST00000560754	LCN8	Q6JVE9	175 aa		11.17	□□□□□ -0.62
RNF31-223	ENST00000560754	OR6N2	Q8NGY6	317 aa		11.17	□□□□□ -0.62
RNF31-223	ENST00000560754	OTOS	Q8NHW6	89 aa		11.17	□□□□□ -0.62
RNF31-223	ENST00000560754	RPL3L	Q92901	407 aa	Known RBP	11.17	□□□□□ -0.62
RNF31-223	ENST00000560754	PGAM5	Q96HS1	289 aa		11.17	□□□□□ -0.62
RNF31-223	ENST00000560754	LYZL4	Q96KX0	146 aa		11.17	□□□□□ -0.62
RNF31-223	ENST00000560754	FEV	Q99581	238 aa		11.17	□□□□□ -0.62
RNF31-223	ENST00000560754	RTL8A	Q9BWD3	113 aa		11.17	□□□□□ -0.62
RNF31-223	ENST00000560754	PAPOLG	Q9BWT3	736 aa	Known RBP	11.17	□□□□□ -0.62
RNF31-223	ENST00000560754	FGF23	Q9GZV9	251 aa	Predicted RBP	11.17	□□□□□ -0.62
RNF31-223	ENST00000560754	SEMA6A	Q9H2E6	1030 aa		11.17	□□□□□ -0.62
RNF31-223	ENST00000560754	MUC13	Q9H3R2	512 aa		11.17	□□□□□ -0.62
RNF31-223	ENST00000560754	REEP1	Q9H902	201 aa		11.17	□□□□□ -0.62
RNF31-223	ENST00000560754	ABCB9	Q9NP78	766 aa		11.17	□□□□□ -0.62
RNF31-223	ENST00000560754	BRD7	Q9NPI1	651 aa		11.17	□□□□□ -0.62
RNF31-223	ENST00000560754	SIRT7	Q9NRC8	400 aa		11.17	□□□□□ -0.62
RNF31-223	ENST00000560754	DNAJC27	Q9NZQ0	273 aa		11.17	□□□□□ -0.62
RNF31-223	ENST00000560754	FBLN5	Q9UBX5	448 aa		11.17	□□□□□ -0.62
RNF31-223	ENST00000560754	ZNF391	Q9UJN7	358 aa		11.17	□□□□□ -0.62
RNF31-223	ENST00000560754	SAMHD1	Q9Y3Z3	626 aa	Known RBP	11.17	□□□□□ -0.62
RNF31-223	ENST00000560754	TET2	Q6N021	2002 aa	Predicted RBP	11.17	□□□□□ -0.62
RNF31-223	ENST00000560754	PLXNB1	O43157	2135 aa		11.17	□□□□□ -0.62
RNF31-223	ENST00000560754	ZNF850	A8MQ14	1090 aa		11.16	□□□□□ -0.62
RNF31-223	ENST00000560754		B2RBV5	119 aa		11.16	□□□□□ -0.62
RNF31-223	ENST00000560754		M0R1W7	72 aa		11.16	□□□□□ -0.62
RNF31-223	ENST00000560754	SIGLEC5	O15389	551 aa		11.16	□□□□□ -0.62
RNF31-223	ENST00000560754	SELL	P14151	372 aa		11.16	□□□□□ -0.62
RNF31-223	ENST00000560754	IKZF1	Q13422	519 aa		11.16	□□□□□ -0.62
RNF31-223	ENST00000560754	DGUOK	Q16854	277 aa		11.16	□□□□□ -0.62
RNF31-223	ENST00000560754	SLC35E4	Q6ICL7	350 aa		11.16	□□□□□ -0.62
RNF31-223	ENST00000560754	DHFR2	Q86XF0	187 aa		11.16	□□□□□ -0.62
RNF31-223	ENST00000560754	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	11.16	□□□□□ -0.62
RNF31-223	ENST00000560754	ZNF454	Q8N9F8	522 aa		11.16	□□□□□ -0.62
RNF31-223	ENST00000560754	OR5R1	Q8NH85	324 aa		11.16	□□□□□ -0.62
RNF31-223	ENST00000560754	THEM6	Q8WUY1	208 aa		11.16	□□□□□ -0.62
RNF31-223	ENST00000560754	AJUBA	Q96IF1	538 aa		11.16	□□□□□ -0.62
RNF31-223	ENST00000560754	RNF170	Q96K19	258 aa		11.16	□□□□□ -0.62
RNF31-223	ENST00000560754	GAFA1	Q96PS6	74 aa		11.16	□□□□□ -0.62
RNF31-223	ENST00000560754	PKP2	Q99959	881 aa		11.16	□□□□□ -0.62
RNF31-223	ENST00000560754	METTL8	Q9H825	291 aa	Known RBP	11.16	□□□□□ -0.62
RNF31-223	ENST00000560754	SNTG1	Q9NSN8	517 aa		11.16	□□□□□ -0.62
RNF31-223	ENST00000560754	PRKDC	P78527	4128 aa	Known RBP	11.16	□□□□□ -0.62
RNF31-223	ENST00000560754	ARRDC5	A6NEK1	342 aa		11.15	□□□□□ -0.62
RNF31-223	ENST00000560754	OR2AT4	A6NND4	320 aa		11.15	□□□□□ -0.62
RNF31-223	ENST00000560754	AKR7A2	O43488	359 aa		11.15	□□□□□ -0.62
RNF31-223	ENST00000560754	DCTN3	O75935	186 aa		11.15	□□□□□ -0.62
RNF31-223	ENST00000560754	LYN	P07948	512 aa		11.15	□□□□□ -0.62
RNF31-223	ENST00000560754	SAA4	P35542	130 aa		11.15	□□□□□ -0.62
RNF31-223	ENST00000560754	DLX1	P56177	255 aa		11.15	□□□□□ -0.62
RNF31-223	ENST00000560754	PRB3	Q04118	309 aa	Predicted RBP	11.15	□□□□□ -0.62
RNF31-223	ENST00000560754	FAM98B	Q52LJ0	330 aa	Known RBP	11.15	□□□□□ -0.62
RNF31-223	ENST00000560754	HCP5	Q6MZN7	132 aa		11.15	□□□□□ -0.62
RNF31-223	ENST00000560754	BEND2	Q8NDZ0	799 aa		11.15	□□□□□ -0.62
RNF31-223	ENST00000560754	GIPC3	Q8TF64	312 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms