RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 CTDSP2O14595 271 aa9.67□□□□□ -0.86
USP3-218ENST00000560202 NOS1APO75052 506 aaPredicted RBP9.67□□□□□ -0.86
USP3-218ENST00000560202 FAM157BP0CG42 384 aa9.67□□□□□ -0.86
USP3-218ENST00000560202 SLC2A2P11168 524 aaPredicted RBP9.67□□□□□ -0.86
USP3-218ENST00000560202 ATF1P18846 271 aa9.67□□□□□ -0.86
USP3-218ENST00000560202 UCP2P55851 309 aa9.67□□□□□ -0.86
USP3-218ENST00000560202 SPOCK1Q08629 439 aa9.67□□□□□ -0.86
USP3-218ENST00000560202 HLXQ14774 488 aaPredicted RBP9.67□□□□□ -0.86
USP3-218ENST00000560202 OR8B8Q15620 311 aa9.67□□□□□ -0.86
USP3-218ENST00000560202 FBXL19-AS1Q494R0 122 aa9.67□□□□□ -0.86
USP3-218ENST00000560202 C4orf17Q53FE4 359 aa9.67□□□□□ -0.86
USP3-218ENST00000560202 MTFR2Q6P444 385 aa9.67□□□□□ -0.86
USP3-218ENST00000560202 MRPL21Q7Z2W9 205 aaKnown RBP9.67□□□□□ -0.86
USP3-218ENST00000560202 OR13C9Q8NGT0 318 aa9.67□□□□□ -0.86
USP3-218ENST00000560202 ACOT12Q8WYK0 555 aa9.67□□□□□ -0.86
USP3-218ENST00000560202 PP6455Q8WZ26 134 aa9.67□□□□□ -0.86
USP3-218ENST00000560202 KCTD12Q96CX2 325 aaKnown RBP9.67□□□□□ -0.86
USP3-218ENST00000560202 OPA3Q9H6K4 179 aa9.67□□□□□ -0.86
USP3-218ENST00000560202 TMEM138Q9NPI0 162 aa9.67□□□□□ -0.86
USP3-218ENST00000560202 TBC1D24Q9ULP9 559 aa9.67□□□□□ -0.86
USP3-218ENST00000560202 CACNA1BQ00975 2339 aa9.67□□□□□ -0.86
USP3-218ENST00000560202 IGHV2OR16-5A0A0B4J2B6 119 aa9.67□□□□□ -0.86
USP3-218ENST00000560202 AIPO00170 330 aa9.67□□□□□ -0.86
USP3-218ENST00000560202 SULT1B1O43704 296 aa9.67□□□□□ -0.86
USP3-218ENST00000560202 ZNF780AO75290 641 aaPredicted RBP9.67□□□□□ -0.86
USP3-218ENST00000560202 C1QBP02746 253 aa9.67□□□□□ -0.86
USP3-218ENST00000560202 PPP3CBP16298 524 aa9.67□□□□□ -0.86
USP3-218ENST00000560202 BDKRB2P30411 391 aa9.67□□□□□ -0.86
USP3-218ENST00000560202 THBS2P35442 1172 aa9.67□□□□□ -0.86
USP3-218ENST00000560202 PPP1CBP62140 327 aa9.67□□□□□ -0.86
USP3-218ENST00000560202 NAAAQ02083 359 aa9.67□□□□□ -0.86
USP3-218ENST00000560202 HES5Q5TA89 166 aa9.67□□□□□ -0.86
USP3-218ENST00000560202 GLT8D1Q68CQ7 371 aa9.67□□□□□ -0.86
USP3-218ENST00000560202 MZT2AQ6P582 158 aa9.67□□□□□ -0.86
USP3-218ENST00000560202 SEZ6L2Q6UXD5 910 aa9.67□□□□□ -0.86
USP3-218ENST00000560202 UNQ6126/PRO20091Q6UXV3 157 aa9.67□□□□□ -0.86
USP3-218ENST00000560202 UTS2BQ765I0 119 aa9.67□□□□□ -0.86
USP3-218ENST00000560202 SSX8Q7RTT4 187 aa9.67□□□□□ -0.86
USP3-218ENST00000560202 NKAIN3Q8N8D7 197 aa9.67□□□□□ -0.86
USP3-218ENST00000560202 GDPD1Q8N9F7 314 aa9.67□□□□□ -0.86
USP3-218ENST00000560202 CA5BP1Q8WTZ4 195 aa9.67□□□□□ -0.86
USP3-218ENST00000560202 RNASE6Q93091 150 aaKnown RBP9.67□□□□□ -0.86
USP3-218ENST00000560202 CHST5Q9GZS9 411 aa9.67□□□□□ -0.86
USP3-218ENST00000560202 COMMD3Q9UBI1 195 aa9.67□□□□□ -0.86
USP3-218ENST00000560202 NKX2-6A6NCS4 301 aa9.66□□□□□ -0.86
USP3-218ENST00000560202 GGT3PA6NGU5 568 aa9.66□□□□□ -0.86
USP3-218ENST00000560202 RGS5O15539 181 aa9.66□□□□□ -0.86
USP3-218ENST00000560202 TMEM127O75204 238 aa9.66□□□□□ -0.86
USP3-218ENST00000560202 PRB1P04280 392 aa9.66□□□□□ -0.86
USP3-218ENST00000560202 THBDP07204 575 aa9.66□□□□□ -0.86
USP3-218ENST00000560202 ERCC1P07992 297 aaPredicted RBP9.66□□□□□ -0.86
USP3-218ENST00000560202 CD37P11049 281 aa9.66□□□□□ -0.86
USP3-218ENST00000560202 CTRB1P17538 263 aa9.66□□□□□ -0.86
USP3-218ENST00000560202 CALCRP30988 508 aa9.66□□□□□ -0.86
USP3-218ENST00000560202 HTR2BP41595 481 aa9.66□□□□□ -0.86
USP3-218ENST00000560202 RAD52P43351 418 aa9.66□□□□□ -0.86
USP3-218ENST00000560202 CDSNQ15517 529 aa9.66□□□□□ -0.86
USP3-218ENST00000560202 UBE2V2Q15819 145 aa9.66□□□□□ -0.86
USP3-218ENST00000560202 SPATA46Q5T0L3 261 aa9.66□□□□□ -0.86
USP3-218ENST00000560202 ZBTB37Q5TC79 503 aa9.66□□□□□ -0.86
USP3-218ENST00000560202 CTRB2Q6GPI1 263 aa9.66□□□□□ -0.86
USP3-218ENST00000560202 FBXW12Q6X9E4 464 aa9.66□□□□□ -0.86
USP3-218ENST00000560202 ZNF782Q6ZMW2 699 aaPredicted RBP9.66□□□□□ -0.86
USP3-218ENST00000560202 NRARPQ7Z6K4 114 aa9.66□□□□□ -0.86
USP3-218ENST00000560202 OR5AS1Q8N127 324 aa9.66□□□□□ -0.86
USP3-218ENST00000560202 OR8H2Q8N162 312 aa9.66□□□□□ -0.86
USP3-218ENST00000560202 OR56B2PQ8NGI1 322 aa9.66□□□□□ -0.86
USP3-218ENST00000560202 OR52N4Q8NGI2 321 aa9.66□□□□□ -0.86
USP3-218ENST00000560202 OR1J1Q8NGS3 322 aa9.66□□□□□ -0.86
USP3-218ENST00000560202 SDHCQ99643 169 aaPredicted RBP9.66□□□□□ -0.86
USP3-218ENST00000560202 ING3Q9NXR8 418 aa9.66□□□□□ -0.86
USP3-218ENST00000560202 ABRACLQ9P1F3 81 aa9.66□□□□□ -0.86
USP3-218ENST00000560202 CMAHPQ9Y471 501 aa9.66□□□□□ -0.86
USP3-218ENST00000560202 SMG1Q96Q15 3661 aaKnown RBP9.65□□□□□ -0.86
USP3-218ENST00000560202 IGKV1-9A0A0C4DH69 117 aa9.65□□□□□ -0.86
USP3-218ENST00000560202 ZNF816-ZNF321PA0A0X1KG74 233 aa9.65□□□□□ -0.86
USP3-218ENST00000560202 GMDSO60547 372 aa9.65□□□□□ -0.86
USP3-218ENST00000560202 PAHP00439 452 aa9.65□□□□□ -0.86
USP3-218ENST00000560202 CRYAAP02489 173 aa9.65□□□□□ -0.86
USP3-218ENST00000560202 PTBP1P26599 531 aaKnown RBP eCLIP9.65□□□□□ -0.86
USP3-218ENST00000560202 CFPP27918 469 aa9.65□□□□□ -0.86
USP3-218ENST00000560202 GZMKP49863 264 aa9.65□□□□□ -0.86
USP3-218ENST00000560202 ERVS71-1P61550 626 aa9.65□□□□□ -0.86
USP3-218ENST00000560202 BAMBIQ13145 260 aa9.65□□□□□ -0.86
USP3-218ENST00000560202 CLVS2Q5SYC1 327 aa9.65□□□□□ -0.86
USP3-218ENST00000560202 DDI2Q5TDH0 399 aa9.65□□□□□ -0.86
USP3-218ENST00000560202 TMEM42Q69YG0 159 aa9.65□□□□□ -0.86
USP3-218ENST00000560202 LYPD6Q86Y78 171 aa9.65□□□□□ -0.86
USP3-218ENST00000560202 WFDC8Q8IUA0 241 aa9.65□□□□□ -0.86
USP3-218ENST00000560202 JAGN1Q8N5M9 183 aa9.65□□□□□ -0.86
USP3-218ENST00000560202 ZNF671Q8TAW3 534 aa9.65□□□□□ -0.86
USP3-218ENST00000560202 SLC25A40Q8TBP6 338 aa9.65□□□□□ -0.86
USP3-218ENST00000560202 FOXRED1Q96CU9 486 aaPredicted RBP9.65□□□□□ -0.86
USP3-218ENST00000560202 LRRC46Q96FV0 321 aa9.65□□□□□ -0.86
USP3-218ENST00000560202 ZC3HAV1LQ96H79 300 aaKnown RBP9.65□□□□□ -0.86
USP3-218ENST00000560202 WFIKKN1Q96NZ8 548 aa9.65□□□□□ -0.86
USP3-218ENST00000560202 BCL2L14Q9BZR8 327 aa9.65□□□□□ -0.86
USP3-218ENST00000560202 OR2J1Q9GZK6 312 aa9.65□□□□□ -0.86
USP3-218ENST00000560202 MIXL1Q9H2W2 232 aa9.65□□□□□ -0.86
USP3-218ENST00000560202 ABCB9Q9NP78 766 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms