RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 LPCAT4Q643R3 524 aa12.38□□□□□ -0.43
RABGGTA-211ENST00000559850 WDR82Q6UXN9 313 aa12.38□□□□□ -0.43
RABGGTA-211ENST00000559850 DCDC5Q6ZRR9 648 aa12.38□□□□□ -0.43
RABGGTA-211ENST00000559850 MOB3CQ70IA8 216 aa12.38□□□□□ -0.43
RABGGTA-211ENST00000559850 ZDHHC23Q8IYP9 409 aa12.38□□□□□ -0.43
RABGGTA-211ENST00000559850 GALNT4Q8N4A0 578 aa12.38□□□□□ -0.43
RABGGTA-211ENST00000559850 PLPP7Q8NBV4 271 aa12.38□□□□□ -0.43
RABGGTA-211ENST00000559850 SEMA6DQ8NFY4 1073 aa12.38□□□□□ -0.43
RABGGTA-211ENST00000559850 OR8B3Q8NGG8 313 aa12.38□□□□□ -0.43
RABGGTA-211ENST00000559850 OR2T27Q8NH04 317 aa12.38□□□□□ -0.43
RABGGTA-211ENST00000559850 TRUB1Q8WWH5 349 aaKnown RBP12.38□□□□□ -0.43
RABGGTA-211ENST00000559850 RFKQ969G6 155 aa12.38□□□□□ -0.43
RABGGTA-211ENST00000559850 OR8B2Q96RD0 313 aa12.38□□□□□ -0.43
RABGGTA-211ENST00000559850 RTL8AQ9BWD3 113 aa12.38□□□□□ -0.43
RABGGTA-211ENST00000559850 OR5V1Q9UGF6 321 aa12.38□□□□□ -0.43
RABGGTA-211ENST00000559850 METRNQ9UJH8 293 aa12.38□□□□□ -0.43
RABGGTA-211ENST00000559850 PIGLQ9Y2B2 252 aa12.38□□□□□ -0.43
RABGGTA-211ENST00000559850 MPC1Q9Y5U8 109 aa12.38□□□□□ -0.43
RABGGTA-211ENST00000559850 ZNF816-ZNF321PA0A0X1KG74 233 aa12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 A0A1B0GTI1 187 aa12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 A0A1B0GW55 424 aa12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 OOEPA6NGQ2 149 aa12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 METTL15A6NJ78 407 aa12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 RNF212BA8MTL3 300 aa12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 A8MXK9 166 aa12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 ADAM20O43506 726 aa12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 LHBP01229 141 aa12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 DUX4L2P0CJ85 424 aa12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 DUX4L3P0CJ86 424 aa12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 DUX4L4P0CJ87 422 aa12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 DUX4L5P0CJ88 424 aa12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 DUX4L6P0CJ89 424 aa12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 DUX4L7P0CJ90 424 aa12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 ZNF12P17014 697 aa12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 GABRB1P18505 474 aa12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 MTNR1AP48039 350 aa12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 GPM6AP51674 278 aa12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 SNRPGP62308 76 aaKnown RBP12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 IL5RAQ01344 420 aa12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 RCN1Q15293 331 aa12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 OCLNQ16625 522 aa12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 ZNF684Q5T5D7 378 aa12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 DUX4L9Q6RFH8 374 aaPredicted RBP12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 THAP5Q7Z6K1 395 aa12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 FAM90A1Q86YD7 464 aa12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 ENTHD1Q8IYW4 607 aa12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 ELMOD2Q8IZ81 293 aa12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 FGFRL1Q8N441 504 aa12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 FTMTQ8N4E7 242 aa12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 RORBQ92753 470 aa12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 OCEL1Q9H607 264 aa12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 SMURF1Q9HCE7 757 aa12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 AMBNQ9NP70 447 aa12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 ACOXLQ9NUZ1 547 aa12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 FAM118AQ9NWS6 357 aa12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 DUX4Q9UBX2 424 aa12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 ZNF391Q9UJN7 358 aa12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 GNG8Q9UK08 70 aa12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 LRCH1Q9Y2L9 728 aa12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 INSIG2Q9Y5U4 225 aa12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 SNX5Q9Y5X3 404 aa12.37□□□□□ -0.43
RABGGTA-211ENST00000559850 LOC100130705A0A1B0GUX0 176 aa12.36□□□□□ -0.43
RABGGTA-211ENST00000559850 ZNF732B4DXR9 585 aa12.36□□□□□ -0.43
RABGGTA-211ENST00000559850 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.36□□□□□ -0.43
RABGGTA-211ENST00000559850 J3QLI3 93 aa12.36□□□□□ -0.43
RABGGTA-211ENST00000559850 DLGAP1O14490 977 aa12.36□□□□□ -0.43
RABGGTA-211ENST00000559850 FCN3O75636 299 aa12.36□□□□□ -0.43
RABGGTA-211ENST00000559850 DHRS3O75911 302 aa12.36□□□□□ -0.43
RABGGTA-211ENST00000559850 PAX2Q02962 417 aa12.36□□□□□ -0.43
RABGGTA-211ENST00000559850 RIPPLY1Q0D2K3 151 aa12.36□□□□□ -0.43
RABGGTA-211ENST00000559850 TMED1Q13445 227 aa12.36□□□□□ -0.43
RABGGTA-211ENST00000559850 SNCBQ16143 134 aa12.36□□□□□ -0.43
RABGGTA-211ENST00000559850 ZSCAN26Q16670 478 aa12.36□□□□□ -0.43
RABGGTA-211ENST00000559850 KRTAP24-1Q3LI83 254 aa12.36□□□□□ -0.43
RABGGTA-211ENST00000559850 PLCXD3Q63HM9 321 aa12.36□□□□□ -0.43
RABGGTA-211ENST00000559850 WDR25Q64LD2 544 aaPredicted RBP12.36□□□□□ -0.43
RABGGTA-211ENST00000559850 ZNF841Q6ZN19 808 aa12.36□□□□□ -0.43
RABGGTA-211ENST00000559850 NLRC3Q7RTR2 1065 aa12.36□□□□□ -0.43
RABGGTA-211ENST00000559850 C1QL2Q7Z5L3 287 aa12.36□□□□□ -0.43
RABGGTA-211ENST00000559850 CATSPERDQ86XM0 798 aa12.36□□□□□ -0.43
RABGGTA-211ENST00000559850 PRSS35Q8N3Z0 413 aa12.36□□□□□ -0.43
RABGGTA-211ENST00000559850 SCCPDHQ8NBX0 429 aa12.36□□□□□ -0.43
RABGGTA-211ENST00000559850 OR5T2Q8NGG2 359 aa12.36□□□□□ -0.43
RABGGTA-211ENST00000559850 OR14K1Q8NGZ2 314 aa12.36□□□□□ -0.43
RABGGTA-211ENST00000559850 C22orf15Q8WYQ4 148 aa12.36□□□□□ -0.43
RABGGTA-211ENST00000559850 LGALS12Q96DT0 336 aa12.36□□□□□ -0.43
RABGGTA-211ENST00000559850 TECTBQ96PL2 329 aa12.36□□□□□ -0.43
RABGGTA-211ENST00000559850 HIST1H2AAQ96QV6 131 aa12.36□□□□□ -0.43
RABGGTA-211ENST00000559850 TLNRD1Q9H1K6 362 aa12.36□□□□□ -0.43
RABGGTA-211ENST00000559850 WDR13Q9H1Z4 485 aa12.36□□□□□ -0.43
RABGGTA-211ENST00000559850 MOB1AQ9H8S9 216 aa12.36□□□□□ -0.43
RABGGTA-211ENST00000559850 GPR173Q9NS66 373 aa12.36□□□□□ -0.43
RABGGTA-211ENST00000559850 SNTG1Q9NSN8 517 aa12.36□□□□□ -0.43
RABGGTA-211ENST00000559850 CLN8Q9UBY8 286 aa12.36□□□□□ -0.43
RABGGTA-211ENST00000559850 IGHV3OR16-10A0A075B7F0 116 aa12.35□□□□□ -0.43
RABGGTA-211ENST00000559850 TRAV38-1A0A0B4J264 116 aa12.35□□□□□ -0.43
RABGGTA-211ENST00000559850 J3QRE1 110 aa12.35□□□□□ -0.43
RABGGTA-211ENST00000559850 TNFRSF13BO14836 293 aaPredicted RBP12.35□□□□□ -0.43
RABGGTA-211ENST00000559850 AKR7A2O43488 359 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms