RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, human

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNB4-204	ENST00000559849	RORB	Q92753	470 aa		11.5	□□□□□ -0.57
CHRNB4-204	ENST00000559849	ABCB9	Q9NP78	766 aa		11.5	□□□□□ -0.57
CHRNB4-204	ENST00000559849	GNG8	Q9UK08	70 aa		11.5	□□□□□ -0.57
CHRNB4-204	ENST00000559849	ZNF816-ZNF321P	A0A0X1KG74	233 aa		11.5	□□□□□ -0.57
CHRNB4-204	ENST00000559849		H0YAE9	185 aa		11.5	□□□□□ -0.57
CHRNB4-204	ENST00000559849	WBP4	O75554	376 aa	Known RBP	11.5	□□□□□ -0.57
CHRNB4-204	ENST00000559849	DHRS3	O75911	302 aa		11.5	□□□□□ -0.57
CHRNB4-204	ENST00000559849	FSTL3	O95633	263 aa		11.5	□□□□□ -0.57
CHRNB4-204	ENST00000559849	CYB5R3	P00387	301 aa	Predicted RBP	11.5	□□□□□ -0.57
CHRNB4-204	ENST00000559849	GRP	P07492	148 aa		11.5	□□□□□ -0.57
CHRNB4-204	ENST00000559849	MDH2	P40926	338 aa	Known RBP	11.5	□□□□□ -0.57
CHRNB4-204	ENST00000559849	ISL1	P61371	349 aa		11.5	□□□□□ -0.57
CHRNB4-204	ENST00000559849	RIPPLY1	Q0D2K3	151 aa		11.5	□□□□□ -0.57
CHRNB4-204	ENST00000559849	CDON	Q4KMG0	1287 aa		11.5	□□□□□ -0.57
CHRNB4-204	ENST00000559849	TP53I3	Q53FA7	332 aa		11.5	□□□□□ -0.57
CHRNB4-204	ENST00000559849	KLHL36	Q8N4N3	616 aa		11.5	□□□□□ -0.57
CHRNB4-204	ENST00000559849	SPIC	Q8N5J4	248 aa		11.5	□□□□□ -0.57
CHRNB4-204	ENST00000559849	PIGC	Q92535	297 aa		11.5	□□□□□ -0.57
CHRNB4-204	ENST00000559849	ITPKC	Q96DU7	683 aa		11.5	□□□□□ -0.57
CHRNB4-204	ENST00000559849	MRPL48	Q96GC5	212 aa	Known RBP	11.5	□□□□□ -0.57
CHRNB4-204	ENST00000559849	FAM71F1	Q96KD3	344 aa	Predicted RBP	11.5	□□□□□ -0.57
CHRNB4-204	ENST00000559849	HIST1H2AA	Q96QV6	131 aa		11.5	□□□□□ -0.57
CHRNB4-204	ENST00000559849	MICU1	Q9BPX6	476 aa		11.5	□□□□□ -0.57
CHRNB4-204	ENST00000559849	KCNS2	Q9ULS6	477 aa		11.5	□□□□□ -0.57
CHRNB4-204	ENST00000559849	PCDHB10	Q9UN67	800 aa		11.5	□□□□□ -0.57
CHRNB4-204	ENST00000559849	MYRF	Q9Y2G1	1151 aa		11.5	□□□□□ -0.57
CHRNB4-204	ENST00000559849	PCDHGB5	Q9Y5G0	923 aa		11.5	□□□□□ -0.57
CHRNB4-204	ENST00000559849	HSPE1-MOB4	S4R3N1	261 aa		11.5	□□□□□ -0.57
CHRNB4-204	ENST00000559849	DOCK11	Q5JSL3	2073 aa		11.49	□□□□□ -0.57
CHRNB4-204	ENST00000559849	PPIAL4E	A0A075B759	164 aa		11.49	□□□□□ -0.57
CHRNB4-204	ENST00000559849	ZNF850	A8MQ14	1090 aa		11.49	□□□□□ -0.57
CHRNB4-204	ENST00000559849	FAM157A	C9JC47	383 aa		11.49	□□□□□ -0.57
CHRNB4-204	ENST00000559849	PPIAL4D	F5H284	164 aa		11.49	□□□□□ -0.57
CHRNB4-204	ENST00000559849	FAM20B	O75063	409 aa		11.49	□□□□□ -0.57
CHRNB4-204	ENST00000559849	IGHV2-5	P01817	119 aa		11.49	□□□□□ -0.57
CHRNB4-204	ENST00000559849	PPIAL4F	P0DN26	164 aa		11.49	□□□□□ -0.57
CHRNB4-204	ENST00000559849	CAPG	P40121	348 aa		11.49	□□□□□ -0.57
CHRNB4-204	ENST00000559849	PSMD7	P51665	324 aa		11.49	□□□□□ -0.57
CHRNB4-204	ENST00000559849	PRDX4	Q13162	271 aa		11.49	□□□□□ -0.57
CHRNB4-204	ENST00000559849	CBX3	Q13185	183 aa		11.49	□□□□□ -0.57
CHRNB4-204	ENST00000559849	ZMYND11	Q15326	602 aa		11.49	□□□□□ -0.57
CHRNB4-204	ENST00000559849	SMN1	Q16637	294 aa	Known RBP	11.49	□□□□□ -0.57
CHRNB4-204	ENST00000559849	ZBTB37	Q5TC79	503 aa		11.49	□□□□□ -0.57
CHRNB4-204	ENST00000559849	THAP5	Q7Z6K1	395 aa		11.49	□□□□□ -0.57
CHRNB4-204	ENST00000559849	CATSPERD	Q86XM0	798 aa		11.49	□□□□□ -0.57
CHRNB4-204	ENST00000559849	MUC20	Q8N307	709 aa	Predicted RBP	11.49	□□□□□ -0.57
CHRNB4-204	ENST00000559849	PPP1R3E	Q9H7J1	279 aa		11.49	□□□□□ -0.57
CHRNB4-204	ENST00000559849	INPP5E	Q9NRR6	644 aa		11.49	□□□□□ -0.57
CHRNB4-204	ENST00000559849	ACOXL	Q9NUZ1	547 aa		11.49	□□□□□ -0.57
CHRNB4-204	ENST00000559849	TMEM160	Q9NX00	188 aa		11.49	□□□□□ -0.57
CHRNB4-204	ENST00000559849	RNF7	Q9UBF6	113 aa		11.49	□□□□□ -0.57
CHRNB4-204	ENST00000559849	SLC22A13	Q9Y226	551 aa		11.49	□□□□□ -0.57
CHRNB4-204	ENST00000559849	PPIAL4A	Q9Y536	164 aa		11.49	□□□□□ -0.57
CHRNB4-204	ENST00000559849	GNAO1	P09471	354 aa		11.48	□□□□□ -0.57
CHRNB4-204	ENST00000559849	OR12D2	P58182	307 aa		11.48	□□□□□ -0.57
CHRNB4-204	ENST00000559849	ACTA2	P62736	377 aa		11.48	□□□□□ -0.57
CHRNB4-204	ENST00000559849	ACTG2	P63267	376 aa		11.48	□□□□□ -0.57
CHRNB4-204	ENST00000559849	GALE	Q14376	348 aa		11.48	□□□□□ -0.57
CHRNB4-204	ENST00000559849	LHFPL3	Q86UP9	236 aa		11.48	□□□□□ -0.57
CHRNB4-204	ENST00000559849	OR5P3	Q8WZ94	311 aa		11.48	□□□□□ -0.57
CHRNB4-204	ENST00000559849	RTL8A	Q9BWD3	113 aa		11.48	□□□□□ -0.57
CHRNB4-204	ENST00000559849	PIGL	Q9Y2B2	252 aa		11.48	□□□□□ -0.57
CHRNB4-204	ENST00000559849		A0A1B0GTI1	187 aa		11.48	□□□□□ -0.57
CHRNB4-204	ENST00000559849		A6NLC8	198 aa		11.48	□□□□□ -0.57
CHRNB4-204	ENST00000559849	P2RY10	O00398	339 aa		11.48	□□□□□ -0.57
CHRNB4-204	ENST00000559849	CRLF1	O75462	422 aa		11.48	□□□□□ -0.57
CHRNB4-204	ENST00000559849	ZNF205	O95201	554 aa		11.48	□□□□□ -0.57
CHRNB4-204	ENST00000559849	IGHA1	P01876	353 aa		11.48	□□□□□ -0.57
CHRNB4-204	ENST00000559849	DOK3	Q7L591	496 aa		11.48	□□□□□ -0.57
CHRNB4-204	ENST00000559849	ZDHHC23	Q8IYP9	409 aa		11.48	□□□□□ -0.57
CHRNB4-204	ENST00000559849	C8orf59	Q8N0T1	100 aa	Predicted RBP	11.48	□□□□□ -0.57
CHRNB4-204	ENST00000559849	OR1M1	Q8NGA1	313 aa		11.48	□□□□□ -0.57
CHRNB4-204	ENST00000559849	CNIH3	Q8TBE1	160 aa		11.48	□□□□□ -0.57
CHRNB4-204	ENST00000559849	PATZ1	Q9HBE1	687 aa	Known RBP	11.48	□□□□□ -0.57
CHRNB4-204	ENST00000559849	C1orf123	Q9NWV4	160 aa		11.48	□□□□□ -0.57
CHRNB4-204	ENST00000559849	ENPP5	Q9UJA9	477 aa		11.48	□□□□□ -0.57
CHRNB4-204	ENST00000559849	DHRS7C	A6NNS2	312 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849		J3QLW9	94 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	MSMB	P08118	114 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	ZNF19	P17023	458 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	HOXB4	P17483	251 aa	Predicted RBP	11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	MYF6	P23409	242 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	DVL1P1	P54792	670 aa	Predicted RBP	11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	ZNF154	Q13106	437 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	ODF4	Q2M2E3	257 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	FAM76B	Q5HYJ3	339 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849		Q6ZSR3	168 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	PRSS35	Q8N3Z0	413 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	OR52I1	Q8NGK6	324 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	OR51F2	Q8NH61	342 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	RNF170	Q96K19	258 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	ALG8	Q9BVK2	526 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	LPAR2	Q9HBW0	351 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	FGF20	Q9NP95	211 aa	Predicted RBP	11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	RHBDL2	Q9NX52	303 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	ERVK13-1	Q9NX77	482 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849		V9GYS6	101 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	ARHGAP32	A7KAX9	2087 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	MXRA5	Q9NR99	2828 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849		A0A1B0GVI7	797 aa		11.47	□□□□□ -0.57

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