RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 TPTEP56180 551 aa7.16□□□□□ -1.26
SNRPA1-208ENST00000559686 HIST1H3AP68431 136 aa7.16□□□□□ -1.26
SNRPA1-208ENST00000559686 FHL1Q13642 323 aa7.16□□□□□ -1.26
SNRPA1-208ENST00000559686 HIST2H3PS2Q5TEC6 136 aa7.16□□□□□ -1.26
SNRPA1-208ENST00000559686 ZNF788Q6ZQV5 615 aa7.16□□□□□ -1.26
SNRPA1-208ENST00000559686 C8orf86Q6ZUL3 223 aa7.16□□□□□ -1.26
SNRPA1-208ENST00000559686 HIST2H3AQ71DI3 136 aa7.16□□□□□ -1.26
SNRPA1-208ENST00000559686 PATL1Q86TB9 770 aaKnown RBP7.16□□□□□ -1.26
SNRPA1-208ENST00000559686 FUNDC1Q8IVP5 155 aa7.16□□□□□ -1.26
SNRPA1-208ENST00000559686 NRMQ8IXM6 262 aa7.16□□□□□ -1.26
SNRPA1-208ENST00000559686 TMEM185AQ8NFB2 350 aa7.16□□□□□ -1.26
SNRPA1-208ENST00000559686 BCAS4Q8TDM0 211 aa7.16□□□□□ -1.26
SNRPA1-208ENST00000559686 ATF6BQ99941 703 aa7.16□□□□□ -1.26
SNRPA1-208ENST00000559686 MCRIP2Q9BUT9 160 aaKnown RBP7.16□□□□□ -1.26
SNRPA1-208ENST00000559686 NSRP1Q9H0G5 558 aaKnown RBP7.16□□□□□ -1.26
SNRPA1-208ENST00000559686 MYLK2Q9H1R3 596 aa7.16□□□□□ -1.26
SNRPA1-208ENST00000559686 RNPEPL1Q9HAU8 725 aa7.16□□□□□ -1.26
SNRPA1-208ENST00000559686 HAO2Q9NYQ3 351 aa7.16□□□□□ -1.26
SNRPA1-208ENST00000559686 PITPNC1Q9UKF7 332 aa7.16□□□□□ -1.26
SNRPA1-208ENST00000559686 ELOA3CA0A087WX78 387 aaPredicted RBP7.15□□□□□ -1.26
SNRPA1-208ENST00000559686 MEX3AA1L020 520 aaKnown RBP7.15□□□□□ -1.26
SNRPA1-208ENST00000559686 ERICH4A6NGS2 130 aa7.15□□□□□ -1.26
SNRPA1-208ENST00000559686 ANKRD30BLA7E2S9 258 aa7.15□□□□□ -1.26
SNRPA1-208ENST00000559686 M0R135 149 aa7.15□□□□□ -1.26
SNRPA1-208ENST00000559686 TIPRLO75663 272 aa7.15□□□□□ -1.26
SNRPA1-208ENST00000559686 SASH3O75995 380 aa7.15□□□□□ -1.26
SNRPA1-208ENST00000559686 LY86O95711 162 aa7.15□□□□□ -1.26
SNRPA1-208ENST00000559686 ARG1P05089 322 aa7.15□□□□□ -1.26
SNRPA1-208ENST00000559686 CD14P08571 375 aa7.15□□□□□ -1.26
SNRPA1-208ENST00000559686 SLC2A1P11166 492 aa7.15□□□□□ -1.26
SNRPA1-208ENST00000559686 CCL3L1P16619 93 aa7.15□□□□□ -1.26
SNRPA1-208ENST00000559686 CD24P25063 80 aa7.15□□□□□ -1.26
SNRPA1-208ENST00000559686 MDH1P40925 334 aaKnown RBP7.15□□□□□ -1.26
SNRPA1-208ENST00000559686 NAA10P41227 235 aaPredicted RBP7.15□□□□□ -1.26
SNRPA1-208ENST00000559686 YAP1P46937 504 aaKnown RBP7.15□□□□□ -1.26
SNRPA1-208ENST00000559686 CEBPDP49716 269 aaPredicted RBP7.15□□□□□ -1.26
SNRPA1-208ENST00000559686 THBS3P49746 956 aa7.15□□□□□ -1.26
SNRPA1-208ENST00000559686 CRYBA2P53672 197 aa7.15□□□□□ -1.26
SNRPA1-208ENST00000559686 SLC18A1P54219 525 aa7.15□□□□□ -1.26
SNRPA1-208ENST00000559686 MZT1Q08AG7 82 aa7.15□□□□□ -1.26
SNRPA1-208ENST00000559686 C9orf152Q5JTZ5 239 aa7.15□□□□□ -1.26
SNRPA1-208ENST00000559686 SLC18B1Q6NT16 456 aa7.15□□□□□ -1.26
SNRPA1-208ENST00000559686 OVCH2Q7RTZ1 564 aa7.15□□□□□ -1.26
SNRPA1-208ENST00000559686 SBSPONQ8IVN8 264 aa7.15□□□□□ -1.26
SNRPA1-208ENST00000559686 DRAXINQ8NBI3 349 aaPredicted RBP7.15□□□□□ -1.26
SNRPA1-208ENST00000559686 ZNRF1Q8ND25 227 aa7.15□□□□□ -1.26
SNRPA1-208ENST00000559686 OR1M1Q8NGA1 313 aa7.15□□□□□ -1.26
SNRPA1-208ENST00000559686 OR51D1Q8NGF3 324 aa7.15□□□□□ -1.26
SNRPA1-208ENST00000559686 OR2AJ1Q8NGZ0 328 aa7.15□□□□□ -1.26
SNRPA1-208ENST00000559686 GIMAP1Q8WWP7 306 aa7.15□□□□□ -1.26
SNRPA1-208ENST00000559686 RPL3LQ92901 407 aaKnown RBP7.15□□□□□ -1.26
SNRPA1-208ENST00000559686 ZNF799Q96GE5 643 aa7.15□□□□□ -1.26
SNRPA1-208ENST00000559686 MED30Q96HR3 178 aa7.15□□□□□ -1.26
SNRPA1-208ENST00000559686 HEXA-AS1Q9H8Q6 139 aa7.15□□□□□ -1.26
SNRPA1-208ENST00000559686 C19orf12Q9NSK7 152 aa7.15□□□□□ -1.26
SNRPA1-208ENST00000559686 MRPL15Q9P015 296 aaKnown RBP7.15□□□□□ -1.26
SNRPA1-208ENST00000559686 NKX1-2Q9UD57 310 aaPredicted RBP7.15□□□□□ -1.26
SNRPA1-208ENST00000559686 HILPDAQ9Y5L2 63 aa7.15□□□□□ -1.26
SNRPA1-208ENST00000559686 SNX5Q9Y5X3 404 aa7.15□□□□□ -1.26
SNRPA1-208ENST00000559686 FRAS1Q86XX4 4008 aa7.15□□□□□ -1.27
SNRPA1-208ENST00000559686 DCTN6O00399 190 aa7.14□□□□□ -1.27
SNRPA1-208ENST00000559686 POLR3GO15318 223 aaPredicted RBP7.14□□□□□ -1.27
SNRPA1-208ENST00000559686 AKR7A2O43488 359 aa7.14□□□□□ -1.27
SNRPA1-208ENST00000559686 RAMP3O60896 148 aa7.14□□□□□ -1.27
SNRPA1-208ENST00000559686 RPS27P42677 84 aaKnown RBP7.14□□□□□ -1.27
SNRPA1-208ENST00000559686 SUMO1P63165 101 aaKnown RBP7.14□□□□□ -1.27
SNRPA1-208ENST00000559686 SLC34A1Q06495 639 aa7.14□□□□□ -1.27
SNRPA1-208ENST00000559686 DYNC1I2Q13409 638 aaKnown RBP7.14□□□□□ -1.27
SNRPA1-208ENST00000559686 KCNMB1Q16558 191 aa7.14□□□□□ -1.27
SNRPA1-208ENST00000559686 RFX4Q33E94 735 aa7.14□□□□□ -1.27
SNRPA1-208ENST00000559686 KRTAP27-1Q3LI81 207 aa7.14□□□□□ -1.27
SNRPA1-208ENST00000559686 ABCA11PQ4W5N1 156 aa7.14□□□□□ -1.27
SNRPA1-208ENST00000559686 AGKQ53H12 422 aa7.14□□□□□ -1.27
SNRPA1-208ENST00000559686 LDLRAD2Q5SZI1 272 aa7.14□□□□□ -1.27
SNRPA1-208ENST00000559686 TBPL2Q6SJ96 375 aa7.14□□□□□ -1.27
SNRPA1-208ENST00000559686 PTCHD4Q6ZW05 846 aa7.14□□□□□ -1.27
SNRPA1-208ENST00000559686 FAM122BQ7Z309 247 aa7.14□□□□□ -1.27
SNRPA1-208ENST00000559686 TSEN54Q7Z6J9 526 aaKnown RBP7.14□□□□□ -1.27
SNRPA1-208ENST00000559686 CPLX4Q7Z7G2 160 aa7.14□□□□□ -1.27
SNRPA1-208ENST00000559686 DHDDSQ86SQ9 333 aa7.14□□□□□ -1.27
SNRPA1-208ENST00000559686 ZNF329Q86UD4 541 aa7.14□□□□□ -1.27
SNRPA1-208ENST00000559686 OR6V1Q8N148 313 aa7.14□□□□□ -1.27
SNRPA1-208ENST00000559686 NKAIN3Q8N8D7 197 aa7.14□□□□□ -1.27
SNRPA1-208ENST00000559686 OR4M1Q8NGD0 313 aa7.14□□□□□ -1.27
SNRPA1-208ENST00000559686 C12orf43Q96C57 262 aaKnown RBP7.14□□□□□ -1.27
SNRPA1-208ENST00000559686 LIN7BQ9HAP6 207 aa7.14□□□□□ -1.27
SNRPA1-208ENST00000559686 ZMAT5Q9UDW3 170 aaKnown RBP7.14□□□□□ -1.27
SNRPA1-208ENST00000559686 HERC2O95714 4834 aa7.14□□□□□ -1.27
SNRPA1-208ENST00000559686 TRIM64CA6NLI5 447 aa7.13□□□□□ -1.27
SNRPA1-208ENST00000559686 CDC42EP2O14613 210 aa7.13□□□□□ -1.27
SNRPA1-208ENST00000559686 SIGLEC5O15389 551 aa7.13□□□□□ -1.27
SNRPA1-208ENST00000559686 RHBDL1O75783 438 aa7.13□□□□□ -1.27
SNRPA1-208ENST00000559686 HLA-DQA2P01906 255 aa7.13□□□□□ -1.27
SNRPA1-208ENST00000559686 SNRNP70P08621 437 aaKnown RBP7.13□□□□□ -1.27
SNRPA1-208ENST00000559686 ACAA1P09110 424 aaPredicted RBP7.13□□□□□ -1.27
SNRPA1-208ENST00000559686 CHATP28329 748 aa7.13□□□□□ -1.27
SNRPA1-208ENST00000559686 CDKN2AP42771 156 aaKnown RBP7.13□□□□□ -1.27
SNRPA1-208ENST00000559686 PRKXP51817 358 aa7.13□□□□□ -1.27
SNRPA1-208ENST00000559686 CAV3P56539 151 aa7.13□□□□□ -1.27
SNRPA1-208ENST00000559686 PRKCDQ05655 676 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms