RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 TBC1D28Q2M2D7 210 aa12.31□□□□□ -0.44
RABGGTA-209ENST00000559551 TIMM23BQ5SRD1 257 aa12.31□□□□□ -0.44
RABGGTA-209ENST00000559551 SIGIRRQ6IA17 410 aa12.31□□□□□ -0.44
RABGGTA-209ENST00000559551 SUN5Q8TC36 379 aa12.31□□□□□ -0.44
RABGGTA-209ENST00000559551 TRAF4Q9BUZ4 470 aaPredicted RBP12.31□□□□□ -0.44
RABGGTA-209ENST00000559551 ACTR6Q9GZN1 396 aa12.31□□□□□ -0.44
RABGGTA-209ENST00000559551 CHST5Q9GZS9 411 aa12.31□□□□□ -0.44
RABGGTA-209ENST00000559551 RGCCQ9H4X1 137 aa12.31□□□□□ -0.44
RABGGTA-209ENST00000559551 LIN7BQ9HAP6 207 aa12.31□□□□□ -0.44
RABGGTA-209ENST00000559551 OBP2BQ9NPH6 170 aa12.31□□□□□ -0.44
RABGGTA-209ENST00000559551 AMDHD2Q9Y303 409 aa12.31□□□□□ -0.44
RABGGTA-209ENST00000559551 BOLA1Q9Y3E2 137 aa12.31□□□□□ -0.44
RABGGTA-209ENST00000559551 SPTBN1Q01082 2364 aaKnown RBP12.31□□□□□ -0.44
RABGGTA-209ENST00000559551 SULT1B1O43704 296 aa12.31□□□□□ -0.44
RABGGTA-209ENST00000559551 BDKRB2P30411 391 aa12.31□□□□□ -0.44
RABGGTA-209ENST00000559551 P2RX3P56373 397 aa12.31□□□□□ -0.44
RABGGTA-209ENST00000559551 BAK1Q16611 211 aa12.31□□□□□ -0.44
RABGGTA-209ENST00000559551 DDI2Q5TDH0 399 aa12.31□□□□□ -0.44
RABGGTA-209ENST00000559551 TMEM42Q69YG0 159 aa12.31□□□□□ -0.44
RABGGTA-209ENST00000559551 TMEM211Q6ICI0 200 aa12.31□□□□□ -0.44
RABGGTA-209ENST00000559551 UTS2BQ765I0 119 aa12.31□□□□□ -0.44
RABGGTA-209ENST00000559551 BIVMQ86UB2 503 aa12.31□□□□□ -0.44
RABGGTA-209ENST00000559551 SEMA6DQ8NFY4 1073 aa12.31□□□□□ -0.44
RABGGTA-209ENST00000559551 OR4D6Q8NGJ1 314 aa12.31□□□□□ -0.44
RABGGTA-209ENST00000559551 OR5D14Q8NGL3 314 aa12.31□□□□□ -0.44
RABGGTA-209ENST00000559551 ZFAND1Q8TCF1 268 aa12.31□□□□□ -0.44
RABGGTA-209ENST00000559551 ACOT12Q8WYK0 555 aa12.31□□□□□ -0.44
RABGGTA-209ENST00000559551 SLC25A38Q96DW6 304 aa12.31□□□□□ -0.44
RABGGTA-209ENST00000559551 BBC3Q96PG8 261 aaPredicted RBP12.31□□□□□ -0.44
RABGGTA-209ENST00000559551 SOSTQ9BQB4 213 aa12.31□□□□□ -0.44
RABGGTA-209ENST00000559551 RANGRFQ9HD47 186 aaPredicted RBP12.31□□□□□ -0.44
RABGGTA-209ENST00000559551 PLSCR3Q9NRY6 295 aa12.31□□□□□ -0.44
RABGGTA-209ENST00000559551 CKLFQ9UBR5 152 aa12.31□□□□□ -0.44
RABGGTA-209ENST00000559551 DHRS7CA6NNS2 312 aa12.3□□□□□ -0.44
RABGGTA-209ENST00000559551 SLC17A2O00624 439 aa12.3□□□□□ -0.44
RABGGTA-209ENST00000559551 LILRA1O75019 489 aa12.3□□□□□ -0.44
RABGGTA-209ENST00000559551 FAM157BP0CG42 384 aa12.3□□□□□ -0.44
RABGGTA-209ENST00000559551 RAB3AP20336 220 aa12.3□□□□□ -0.44
RABGGTA-209ENST00000559551 HOXC12P31275 282 aa12.3□□□□□ -0.44
RABGGTA-209ENST00000559551 P2RY14Q15391 338 aa12.3□□□□□ -0.44
RABGGTA-209ENST00000559551 C1orf100Q5SVJ3 147 aa12.3□□□□□ -0.44
RABGGTA-209ENST00000559551 SPATA46Q5T0L3 261 aa12.3□□□□□ -0.44
RABGGTA-209ENST00000559551 CNIH2Q6PI25 160 aa12.3□□□□□ -0.44
RABGGTA-209ENST00000559551 FJX1Q86VR8 437 aa12.3□□□□□ -0.44
RABGGTA-209ENST00000559551 SAMD12Q8N8I0 201 aa12.3□□□□□ -0.44
RABGGTA-209ENST00000559551 DTX3Q8N9I9 347 aa12.3□□□□□ -0.44
RABGGTA-209ENST00000559551 UBASH3BQ8TF42 649 aa12.3□□□□□ -0.44
RABGGTA-209ENST00000559551 CCDC120Q96HB5 630 aa12.3□□□□□ -0.44
RABGGTA-209ENST00000559551 PLEKHA1Q9HB21 404 aa12.3□□□□□ -0.44
RABGGTA-209ENST00000559551 TMEM138Q9NPI0 162 aa12.3□□□□□ -0.44
RABGGTA-209ENST00000559551 ABRACLQ9P1F3 81 aa12.3□□□□□ -0.44
RABGGTA-209ENST00000559551 ZNF391Q9UJN7 358 aa12.3□□□□□ -0.44
RABGGTA-209ENST00000559551 SPATA2Q9UM82 520 aa12.3□□□□□ -0.44
RABGGTA-209ENST00000559551 ATXN7O15265 892 aaPredicted RBP12.3□□□□□ -0.44
RABGGTA-209ENST00000559551 MTRF1O75570 445 aaKnown RBP12.3□□□□□ -0.44
RABGGTA-209ENST00000559551 MAP2K3P46734 347 aa12.3□□□□□ -0.44
RABGGTA-209ENST00000559551 UQCRFS1P47985 274 aa12.3□□□□□ -0.44
RABGGTA-209ENST00000559551 EVX1P49640 407 aa12.3□□□□□ -0.44
RABGGTA-209ENST00000559551 PPP3R1P63098 170 aa12.3□□□□□ -0.44
RABGGTA-209ENST00000559551 FAM131AQ6UXB0 335 aa12.3□□□□□ -0.44
RABGGTA-209ENST00000559551 PGAP1Q75T13 922 aa12.3□□□□□ -0.44
RABGGTA-209ENST00000559551 FAM169BQ8N8A8 192 aa12.3□□□□□ -0.44
RABGGTA-209ENST00000559551 OR56B2PQ8NGI1 322 aa12.3□□□□□ -0.44
RABGGTA-209ENST00000559551 NPRL2Q8WTW4 380 aa12.3□□□□□ -0.44
RABGGTA-209ENST00000559551 AKAP1Q92667 903 aaKnown RBP eCLIP12.3□□□□□ -0.44
RABGGTA-209ENST00000559551 FGF23Q9GZV9 251 aaPredicted RBP12.3□□□□□ -0.44
RABGGTA-209ENST00000559551 MMP28Q9H239 520 aa12.3□□□□□ -0.44
RABGGTA-209ENST00000559551 CNTD2Q9H8S5 307 aa12.3□□□□□ -0.44
RABGGTA-209ENST00000559551 GPR173Q9NS66 373 aa12.3□□□□□ -0.44
RABGGTA-209ENST00000559551 ELOVL5Q9NYP7 299 aa12.3□□□□□ -0.44
RABGGTA-209ENST00000559551 STEAP1Q9UHE8 339 aa12.3□□□□□ -0.44
RABGGTA-209ENST00000559551 IGHV2OR16-5A0A0B4J2B6 119 aa12.29□□□□□ -0.44
RABGGTA-209ENST00000559551 THBDP07204 575 aa12.29□□□□□ -0.44
RABGGTA-209ENST00000559551 PRF1P14222 555 aa12.29□□□□□ -0.44
RABGGTA-209ENST00000559551 AZGP1P25311 298 aaKnown RBP12.29□□□□□ -0.44
RABGGTA-209ENST00000559551 ZNF83P51522 516 aa12.29□□□□□ -0.44
RABGGTA-209ENST00000559551 CASP6P55212 293 aa12.29□□□□□ -0.44
RABGGTA-209ENST00000559551 RIPPLY1Q0D2K3 151 aa12.29□□□□□ -0.44
RABGGTA-209ENST00000559551 SMUG1Q53HV7 270 aa12.29□□□□□ -0.44
RABGGTA-209ENST00000559551 MZT2AQ6P582 158 aa12.29□□□□□ -0.44
RABGGTA-209ENST00000559551 ZNF767PQ75MW2 155 aa12.29□□□□□ -0.44
RABGGTA-209ENST00000559551 CCDC54Q8NEL0 328 aa12.29□□□□□ -0.44
RABGGTA-209ENST00000559551 OR51D1Q8NGF3 324 aa12.29□□□□□ -0.44
RABGGTA-209ENST00000559551 C10orf35Q96D05 121 aa12.29□□□□□ -0.44
RABGGTA-209ENST00000559551 DIRAS2Q96HU8 199 aa12.29□□□□□ -0.44
RABGGTA-209ENST00000559551 CDH20Q9HBT6 801 aa12.29□□□□□ -0.44
RABGGTA-209ENST00000559551 ROS1P08922 2347 aa12.29□□□□□ -0.44
RABGGTA-209ENST00000559551 IGKV1-27A0A075B6S5 117 aa12.28□□□□□ -0.44
RABGGTA-209ENST00000559551 MEGF11A6BM72 1044 aa12.28□□□□□ -0.44
RABGGTA-209ENST00000559551 GMDSO60547 372 aa12.28□□□□□ -0.44
RABGGTA-209ENST00000559551 EFNB2P52799 333 aa12.28□□□□□ -0.44
RABGGTA-209ENST00000559551 PPA1Q15181 289 aa12.28□□□□□ -0.44
RABGGTA-209ENST00000559551 IGFBP7Q16270 282 aa12.28□□□□□ -0.44
RABGGTA-209ENST00000559551 GLT8D1Q68CQ7 371 aa12.28□□□□□ -0.44
RABGGTA-209ENST00000559551 ALKBH2Q6NS38 261 aa12.28□□□□□ -0.44
RABGGTA-209ENST00000559551 KRT74Q7RTS7 529 aa12.28□□□□□ -0.44
RABGGTA-209ENST00000559551 JAGN1Q8N5M9 183 aa12.28□□□□□ -0.44
RABGGTA-209ENST00000559551 OR4M1Q8NGD0 313 aa12.28□□□□□ -0.44
RABGGTA-209ENST00000559551 ENKURQ8TC29 256 aa12.28□□□□□ -0.44
RABGGTA-209ENST00000559551 PP6455Q8WZ26 134 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms