RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 SRSF7Q16629 238 aaKnown RBP eCLIP7.65□□□□□ -1.182e-9■■■□□ 16.9
SMAD3-211ENST00000559460 MEP1BQ16820 701 aa7.65□□□□□ -1.18
SMAD3-211ENST00000559460 RFX4Q33E94 735 aa7.65□□□□□ -1.18
SMAD3-211ENST00000559460 SNAI3Q3KNW1 292 aa7.65□□□□□ -1.18
SMAD3-211ENST00000559460 SLC36A3Q495N2 470 aa7.65□□□□□ -1.18
SMAD3-211ENST00000559460 GLYATL3Q5SZD4 288 aa7.65□□□□□ -1.18
SMAD3-211ENST00000559460 HIST2H3PS2Q5TEC6 136 aa7.65□□□□□ -1.18
SMAD3-211ENST00000559460 TMEM200BQ69YZ2 307 aa7.65□□□□□ -1.18
SMAD3-211ENST00000559460 HIST2H3AQ71DI3 136 aa7.65□□□□□ -1.18
SMAD3-211ENST00000559460 CCDC80Q76M96 950 aa7.65□□□□□ -1.18
SMAD3-211ENST00000559460 PATL1Q86TB9 770 aaKnown RBP7.65□□□□□ -1.18
SMAD3-211ENST00000559460 WDR86Q86TI4 376 aa7.65□□□□□ -1.18
SMAD3-211ENST00000559460 LINC00346Q8IVM7 164 aa7.65□□□□□ -1.18
SMAD3-211ENST00000559460 C11orf53Q8IXP5 236 aa7.65□□□□□ -1.18
SMAD3-211ENST00000559460 IFT20Q8IY31 132 aa7.65□□□□□ -1.18
SMAD3-211ENST00000559460 OR6V1Q8N148 313 aa7.65□□□□□ -1.18
SMAD3-211ENST00000559460 FTMTQ8N4E7 242 aa7.65□□□□□ -1.18
SMAD3-211ENST00000559460 OR4D11Q8NGI4 311 aa7.65□□□□□ -1.18
SMAD3-211ENST00000559460 OR10Z1Q8NGY1 313 aa7.65□□□□□ -1.18
SMAD3-211ENST00000559460 OR2T27Q8NH04 317 aa7.65□□□□□ -1.18
SMAD3-211ENST00000559460 PKNOX2Q96KN3 472 aa7.65□□□□□ -1.18
SMAD3-211ENST00000559460 Q96M85 177 aa7.65□□□□□ -1.18
SMAD3-211ENST00000559460 C16orf45Q96MC5 204 aaPredicted RBP7.65□□□□□ -1.18
SMAD3-211ENST00000559460 RTL8AQ9BWD3 113 aa7.65□□□□□ -1.18
SMAD3-211ENST00000559460 PAPOLGQ9BWT3 736 aaKnown RBP7.65□□□□□ -1.18
SMAD3-211ENST00000559460 NSRP1Q9H0G5 558 aaKnown RBP7.65□□□□□ -1.18
SMAD3-211ENST00000559460 KCNG2Q9UJ96 466 aa7.65□□□□□ -1.18
SMAD3-211ENST00000559460 RIMS3Q9UJD0 308 aa7.65□□□□□ -1.18
SMAD3-211ENST00000559460 ADAM18Q9Y3Q7 739 aa7.65□□□□□ -1.18
SMAD3-211ENST00000559460 N6AMT1Q9Y5N5 214 aa7.65□□□□□ -1.18
SMAD3-211ENST00000559460 SERPINE3A8MV23 424 aa7.64□□□□□ -1.19
SMAD3-211ENST00000559460 FAM90A22PA8MWA6 464 aa7.64□□□□□ -1.19
SMAD3-211ENST00000559460 EFCAB9A8MZ26 197 aa7.64□□□□□ -1.19
SMAD3-211ENST00000559460 XRCC2O43543 280 aa7.64□□□□□ -1.19
SMAD3-211ENST00000559460 PTP4A3O75365 173 aa7.64□□□□□ -1.19
SMAD3-211ENST00000559460 DNAJC8O75937 253 aaPredicted RBP7.64□□□□□ -1.19
SMAD3-211ENST00000559460 CD14P08571 375 aa7.64□□□□□ -1.19
SMAD3-211ENST00000559460 JUNBP17275 347 aaPredicted RBP7.64□□□□□ -1.19
SMAD3-211ENST00000559460 CRABP1P29762 137 aa7.64□□□□□ -1.19
SMAD3-211ENST00000559460 POU3F4P49335 361 aa7.64□□□□□ -1.19
SMAD3-211ENST00000559460 MXRA7P84157 204 aa7.64□□□□□ -1.19
SMAD3-211ENST00000559460 SNCBQ16143 134 aa7.64□□□□□ -1.19
SMAD3-211ENST00000559460 DEFB136Q30KP8 78 aa7.64□□□□□ -1.19
SMAD3-211ENST00000559460 AGBL2Q5U5Z8 902 aa7.64□□□□□ -1.19
SMAD3-211ENST00000559460 C16orf89Q6UX73 402 aa7.64□□□□□ -1.19
SMAD3-211ENST00000559460 ZNF429Q86V71 674 aa7.64□□□□□ -1.19
SMAD3-211ENST00000559460 TSPYL5Q86VY4 417 aaPredicted RBP7.64□□□□□ -1.19
SMAD3-211ENST00000559460 CALHM1Q8IU99 346 aa7.64□□□□□ -1.19
SMAD3-211ENST00000559460 DPP10Q8N608 796 aa7.64□□□□□ -1.19
SMAD3-211ENST00000559460 LRRC75AQ8NAA5 344 aa7.64□□□□□ -1.19
SMAD3-211ENST00000559460 MNS1Q8NEH6 495 aa7.64□□□□□ -1.19
SMAD3-211ENST00000559460 OR11H6Q8NGC7 330 aa7.64□□□□□ -1.19
SMAD3-211ENST00000559460 OR4M1Q8NGD0 313 aa7.64□□□□□ -1.19
SMAD3-211ENST00000559460 OR4C15Q8NGM1 316 aa7.64□□□□□ -1.19
SMAD3-211ENST00000559460 ST6GALNAC6Q969X2 333 aa7.64□□□□□ -1.19
SMAD3-211ENST00000559460 RBM14Q96PK6 669 aaKnown RBP7.64□□□□□ -1.19
SMAD3-211ENST00000559460 PAPOLBQ9NRJ5 636 aaKnown RBP7.64□□□□□ -1.19
SMAD3-211ENST00000559460 SH3GLB1Q9Y371 365 aa7.64□□□□□ -1.19
SMAD3-211ENST00000559460 TMEM210A6NLX4 147 aa7.63□□□□□ -1.19
SMAD3-211ENST00000559460 PRR23D1E9PI22 279 aaPredicted RBP7.63□□□□□ -1.19
SMAD3-211ENST00000559460 TBX1O43435 398 aa7.63□□□□□ -1.19
SMAD3-211ENST00000559460 HLA-DQA2P01906 255 aa7.63□□□□□ -1.19
SMAD3-211ENST00000559460 PRR23D2P0DMB1 279 aaPredicted RBP7.63□□□□□ -1.19
SMAD3-211ENST00000559460 IGHV1-8P0DP01 117 aa7.63□□□□□ -1.19
SMAD3-211ENST00000559460 TROVE2P10155 538 aaKnown RBP eCLIP7.63□□□□□ -1.196e-7■■■□□ 17.7
SMAD3-211ENST00000559460 GP9P14770 177 aa7.63□□□□□ -1.19
SMAD3-211ENST00000559460 CD24P25063 80 aa7.63□□□□□ -1.19
SMAD3-211ENST00000559460 STX1BP61266 288 aa7.63□□□□□ -1.19
SMAD3-211ENST00000559460 PIN1Q13526 163 aaPredicted RBP7.63□□□□□ -1.19
SMAD3-211ENST00000559460 WHAMMP3Q1A5X7 153 aa7.63□□□□□ -1.19
SMAD3-211ENST00000559460 RSPO1Q2MKA7 263 aaPredicted RBP7.63□□□□□ -1.19
SMAD3-211ENST00000559460 KRTAP27-1Q3LI81 207 aa7.63□□□□□ -1.19
SMAD3-211ENST00000559460 NANOGP8Q6NSW7 305 aa7.63□□□□□ -1.19
SMAD3-211ENST00000559460 SLC18B1Q6NT16 456 aa7.63□□□□□ -1.19
SMAD3-211ENST00000559460 TEX38Q6PEX7 206 aa7.63□□□□□ -1.19
SMAD3-211ENST00000559460 DRAM2Q6UX65 266 aa7.63□□□□□ -1.19
SMAD3-211ENST00000559460 MAVSQ7Z434 540 aa7.63□□□□□ -1.19
SMAD3-211ENST00000559460 ADCK1Q86TW2 530 aa7.63□□□□□ -1.19
SMAD3-211ENST00000559460 FOXRED2Q8IWF2 684 aa7.63□□□□□ -1.19
SMAD3-211ENST00000559460 SGPP2Q8IWX5 399 aa7.63□□□□□ -1.19
SMAD3-211ENST00000559460 OR9I1Q8NGQ6 314 aa7.63□□□□□ -1.19
SMAD3-211ENST00000559460 OR13C2Q8NGS9 318 aa7.63□□□□□ -1.19
SMAD3-211ENST00000559460 RPL3LQ92901 407 aaKnown RBP7.63□□□□□ -1.19
SMAD3-211ENST00000559460 NUAK2Q9H093 628 aa7.63□□□□□ -1.19
SMAD3-211ENST00000559460 TLNRD1Q9H1K6 362 aa7.63□□□□□ -1.19
SMAD3-211ENST00000559460 NMNAT1Q9HAN9 279 aaPredicted RBP7.63□□□□□ -1.19
SMAD3-211ENST00000559460 ISYNA1Q9NPH2 558 aa7.63□□□□□ -1.19
SMAD3-211ENST00000559460 SDR39U1Q9NRG7 319 aaPredicted RBP7.63□□□□□ -1.19
SMAD3-211ENST00000559460 PNPOQ9NVS9 261 aa7.63□□□□□ -1.19
SMAD3-211ENST00000559460 SLC25A37Q9NYZ2 338 aa7.63□□□□□ -1.19
SMAD3-211ENST00000559460 STARD9Q9P2P6 4700 aa7.63□□□□□ -1.19
SMAD3-211ENST00000559460 SOCS2O14508 198 aa7.62□□□□□ -1.19
SMAD3-211ENST00000559460 UBDO15205 165 aa7.62□□□□□ -1.19
SMAD3-211ENST00000559460 SLC22A2O15244 555 aa7.62□□□□□ -1.19
SMAD3-211ENST00000559460 SAP30O75446 220 aa7.62□□□□□ -1.19
SMAD3-211ENST00000559460 PSG2P11465 335 aa7.62□□□□□ -1.19
SMAD3-211ENST00000559460 PIPP12273 146 aaPredicted RBP7.62□□□□□ -1.19
SMAD3-211ENST00000559460 GPX2P18283 190 aa7.62□□□□□ -1.19
SMAD3-211ENST00000559460 HTR1DP28221 377 aa7.62□□□□□ -1.19
SMAD3-211ENST00000559460 ACTA2P62736 377 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms