RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 A0A0U1RQV5 110 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 ACOD1A6NK06 481 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 TMEM210A6NLX4 147 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 H3BNX3 289 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 CDIPTO14735 213 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 TMPRSS2O15393 492 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 NDUFA2O43678 99 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 ENSAO43768 121 aaKnown RBP6.83□□□□□ -1.32
SNX1-207ENST00000559401 MTRF1O75570 445 aaKnown RBP6.83□□□□□ -1.32
SNX1-207ENST00000559401 VENTXO95231 258 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 FSTL3O95633 263 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 CST4P01036 141 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 ALPLP05186 524 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 FAHP16930 419 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 HTR1FP30939 366 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 DCTDP32321 178 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 NPY4RP50391 375 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 GPM6AP51674 278 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 ACTG1P63261 375 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 RIPPLY1Q0D2K3 151 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 MICBQ29980 383 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 ODF4Q2M2E3 257 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 DMRTC1Q5HYR2 192 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 CEP78Q5JTW2 689 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 PLCXD3Q63HM9 321 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 WDR82Q6UXN9 313 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 RBMS3Q6XE24 437 aaKnown RBP6.83□□□□□ -1.32
SNX1-207ENST00000559401 MOB3CQ70IA8 216 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 FAM220AQ7Z4H9 259 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 FAM90A1Q86YD7 464 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 GALNT4Q8N4A0 578 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 CBR4Q8N4T8 237 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 RAB40AQ8WXH6 277 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 OR5P3Q8WZ94 311 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 ST8SIA4Q92187 359 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 RPL3LQ92901 407 aaKnown RBP6.83□□□□□ -1.32
SNX1-207ENST00000559401 STMN2Q93045 179 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 PPP1R14AQ96A00 147 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 EME1Q96AY2 570 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 JMJD8Q96S16 334 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 C9orf16Q9BUW7 83 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 MS4A7Q9GZW8 240 aaPredicted RBP6.83□□□□□ -1.32
SNX1-207ENST00000559401 RASSF4Q9H2L5 321 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 MOB1AQ9H8S9 216 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 RNPEPL1Q9HAU8 725 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 PLEKHA1Q9HB21 404 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 CTSZQ9UBR2 303 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 NUFIP1Q9UHK0 495 aaKnown RBP6.83□□□□□ -1.32
SNX1-207ENST00000559401 ENPP5Q9UJA9 477 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 OR52A1Q9UKL2 312 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 NUP50Q9UKX7 468 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 PIGLQ9Y2B2 252 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 POLR3KQ9Y2Y1 108 aaPredicted RBP6.83□□□□□ -1.32
SNX1-207ENST00000559401 R4GMQ9 66 aa6.83□□□□□ -1.32
SNX1-207ENST00000559401 A0A1B0GVI7 797 aa6.82□□□□□ -1.32
SNX1-207ENST00000559401 A0A1W2PQL4 384 aaPredicted RBP6.82□□□□□ -1.32
SNX1-207ENST00000559401 NKX6-3A6NJ46 265 aa6.82□□□□□ -1.32
SNX1-207ENST00000559401 ZNF732B4DXR9 585 aa6.82□□□□□ -1.32
SNX1-207ENST00000559401 H3BSH0 61 aa6.82□□□□□ -1.32
SNX1-207ENST00000559401 TRIM77I1YAP6 450 aa6.82□□□□□ -1.32
SNX1-207ENST00000559401 P2RY10O00398 339 aa6.82□□□□□ -1.32
SNX1-207ENST00000559401 AKR7A2O43488 359 aa6.82□□□□□ -1.32
SNX1-207ENST00000559401 DHRS3O75911 302 aa6.82□□□□□ -1.32
SNX1-207ENST00000559401 BAG2O95816 211 aa6.82□□□□□ -1.32
SNX1-207ENST00000559401 TTRP02766 147 aa6.82□□□□□ -1.32
SNX1-207ENST00000559401 OR2T7P0C7T2 308 aa6.82□□□□□ -1.32
SNX1-207ENST00000559401 ATP6V1B1P15313 513 aa6.82□□□□□ -1.32
SNX1-207ENST00000559401 PSMB10P40306 273 aa6.82□□□□□ -1.32
SNX1-207ENST00000559401 ALDH3A2P51648 485 aa6.82□□□□□ -1.32
SNX1-207ENST00000559401 HILS1P60008 231 aa6.82□□□□□ -1.32
SNX1-207ENST00000559401 FGF12P61328 243 aa6.82□□□□□ -1.32
SNX1-207ENST00000559401 EFNB1P98172 346 aa6.82□□□□□ -1.32
SNX1-207ENST00000559401 EGR3Q06889 387 aa6.82□□□□□ -1.32
SNX1-207ENST00000559401 WDR38Q5JTN6 314 aa6.82□□□□□ -1.32
SNX1-207ENST00000559401 ZNF684Q5T5D7 378 aa6.82□□□□□ -1.32
SNX1-207ENST00000559401 CD276Q5ZPR3 534 aa6.82□□□□□ -1.32
SNX1-207ENST00000559401 SSX6Q7RTT6 188 aa6.82□□□□□ -1.32
SNX1-207ENST00000559401 C11orf53Q8IXP5 236 aa6.82□□□□□ -1.32
SNX1-207ENST00000559401 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.82□□□□□ -1.32
SNX1-207ENST00000559401 SCCPDHQ8NBX0 429 aa6.82□□□□□ -1.32
SNX1-207ENST00000559401 OR2T27Q8NH04 317 aa6.82□□□□□ -1.32
SNX1-207ENST00000559401 HPSE2Q8WWQ2 592 aa6.82□□□□□ -1.32
SNX1-207ENST00000559401 SEH1LQ96EE3 360 aa6.82□□□□□ -1.32
SNX1-207ENST00000559401 CCL13Q99616 98 aa6.82□□□□□ -1.32
SNX1-207ENST00000559401 PCGF1Q9BSM1 259 aa6.82□□□□□ -1.32
SNX1-207ENST00000559401 ADI1Q9BV57 179 aa6.82□□□□□ -1.32
SNX1-207ENST00000559401 SMURF1Q9HCE7 757 aa6.82□□□□□ -1.32
SNX1-207ENST00000559401 S100A14Q9HCY8 104 aa6.82□□□□□ -1.32
SNX1-207ENST00000559401 SNTG1Q9NSN8 517 aa6.82□□□□□ -1.32
SNX1-207ENST00000559401 HAO2Q9NYQ3 351 aa6.82□□□□□ -1.32
SNX1-207ENST00000559401 USE1Q9NZ43 259 aa6.82□□□□□ -1.32
SNX1-207ENST00000559401 ZNF69Q9UC07 566 aa6.82□□□□□ -1.32
SNX1-207ENST00000559401 MRM2Q9UI43 246 aaKnown RBP6.82□□□□□ -1.32
SNX1-207ENST00000559401 GNG8Q9UK08 70 aa6.82□□□□□ -1.32
SNX1-207ENST00000559401 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.82□□□□□ -1.32
SNX1-207ENST00000559401 SLC22A13Q9Y226 551 aa6.82□□□□□ -1.32
SNX1-207ENST00000559401 GMPPBQ9Y5P6 360 aa6.82□□□□□ -1.32
SNX1-207ENST00000559401 SNX5Q9Y5X3 404 aa6.82□□□□□ -1.32
SNX1-207ENST00000559401 FBN1P35555 2871 aaKnown RBP6.81□□□□□ -1.32
SNX1-207ENST00000559401 KIR2DS1A0A191URI9 304 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms