RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 ERI1Q8IV48 349 aaKnown RBP6.69□□□□□ -1.34
TRAF3-205ENST00000558700 GCSAMQ8N6F7 178 aa6.69□□□□□ -1.34
TRAF3-205ENST00000558700 CSNK2A3Q8NEV1 391 aa6.69□□□□□ -1.34
TRAF3-205ENST00000558700 OR52H1Q8NGJ2 320 aa6.69□□□□□ -1.34
TRAF3-205ENST00000558700 PPP1R35Q8TAP8 253 aa6.69□□□□□ -1.34
TRAF3-205ENST00000558700 GIPC3Q8TF64 312 aa6.69□□□□□ -1.34
TRAF3-205ENST00000558700 RNF133Q8WVZ7 376 aa6.69□□□□□ -1.34
TRAF3-205ENST00000558700 ZNRF4Q8WWF5 429 aa6.69□□□□□ -1.34
TRAF3-205ENST00000558700 CCDC124Q96CT7 223 aaKnown RBP6.69□□□□□ -1.34
TRAF3-205ENST00000558700 REEP6Q96HR9 211 aa6.69□□□□□ -1.34
TRAF3-205ENST00000558700 NSL1Q96IY1 281 aa6.69□□□□□ -1.34
TRAF3-205ENST00000558700 PCGF1Q9BSM1 259 aa6.69□□□□□ -1.34
TRAF3-205ENST00000558700 PAPOLGQ9BWT3 736 aaKnown RBP6.69□□□□□ -1.34
TRAF3-205ENST00000558700 OR10A2Q9H208 303 aa6.69□□□□□ -1.34
TRAF3-205ENST00000558700 RGCCQ9H4X1 137 aa6.69□□□□□ -1.34
TRAF3-205ENST00000558700 MARCH7Q9H992 704 aa6.69□□□□□ -1.34
TRAF3-205ENST00000558700 UNKLQ9H9P5 680 aaKnown RBP6.69□□□□□ -1.34
TRAF3-205ENST00000558700 RNPEPL1Q9HAU8 725 aa6.69□□□□□ -1.34
TRAF3-205ENST00000558700 NOX4Q9NPH5 578 aa6.69□□□□□ -1.34
TRAF3-205ENST00000558700 DNAJC27Q9NZQ0 273 aa6.69□□□□□ -1.34
TRAF3-205ENST00000558700 N6AMT1Q9Y5N5 214 aa6.69□□□□□ -1.34
TRAF3-205ENST00000558700 MDFIC2A0A1B0GVS7 189 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 C5orf63A6NC05 138 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 SRRM5B3KS81 715 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 PRR23D1E9PI22 279 aaPredicted RBP6.68□□□□□ -1.34
TRAF3-205ENST00000558700 HOXA3O43365 443 aaPredicted RBP6.68□□□□□ -1.34
TRAF3-205ENST00000558700 TOX4O94842 621 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 GLCEO94923 617 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 ECDO95905 644 aaPredicted RBP6.68□□□□□ -1.34
TRAF3-205ENST00000558700 CST1P01037 141 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 GYPAP02724 150 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 GRPP07492 148 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 H2BFMP0C1H6 154 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 PRR23D2P0DMB1 279 aaPredicted RBP6.68□□□□□ -1.34
TRAF3-205ENST00000558700 MUC1P15941 1255 aaPredicted RBP6.68□□□□□ -1.34
TRAF3-205ENST00000558700 FSTP19883 344 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 ZNF121P58317 390 aaPredicted RBP6.68□□□□□ -1.34
TRAF3-205ENST00000558700 FAM3AP98173 230 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 IL5RAQ01344 420 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 MICBQ29980 383 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 DEFB112Q30KQ8 113 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 TMEM95Q3KNT9 176 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 LCE2AQ5TA79 106 aaPredicted RBP6.68□□□□□ -1.34
TRAF3-205ENST00000558700 LINC01590Q5TEZ4 76 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 TEX36Q5VZQ5 186 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 RUSC1-AS1Q66K80 236 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 SFRP4Q6FHJ7 346 aaPredicted RBP6.68□□□□□ -1.34
TRAF3-205ENST00000558700 C16orf87Q6PH81 154 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 BRD3OSQ6XYD6 125 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 ZNF826PQ6ZT77 177 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 FAM57BQ71RH2 274 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 RHOUQ7L0Q8 258 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 SLC16A9Q7RTY1 509 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 DPY19L4Q7Z388 723 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 PRR18Q8N4B5 295 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 TMEM86BQ8N661 226 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 IQCF1Q8N6M8 205 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 CCDC197Q8NCU1 140 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 LRRC29Q8WV35 223 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 OTULINQ96BN8 352 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 PGAM5Q96HS1 289 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 NIPSNAP1Q9BPW8 284 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 ABHD6Q9BV23 337 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 RTL8AQ9BWD3 113 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 PRDM13Q9H4Q3 707 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 ZNF696Q9H7X3 374 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 ZNF556Q9HAH1 456 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 ABCB9Q9NP78 766 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 KAAG1Q9UBP8 84 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 FBLN5Q9UBX5 448 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 POMT1Q9Y6A1 747 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 MGAM2Q2M2H8 2515 aa6.68□□□□□ -1.34
TRAF3-205ENST00000558700 A0A1B0GUS0 222 aa6.67□□□□□ -1.34
TRAF3-205ENST00000558700 NKX6-3A6NJ46 265 aa6.67□□□□□ -1.34
TRAF3-205ENST00000558700 FAM183AA6NL82 134 aa6.67□□□□□ -1.34
TRAF3-205ENST00000558700 AQP12BA6NM10 295 aa6.67□□□□□ -1.34
TRAF3-205ENST00000558700 GNGT2O14610 69 aa6.67□□□□□ -1.34
TRAF3-205ENST00000558700 DVL1O14640 695 aa6.67□□□□□ -1.34
TRAF3-205ENST00000558700 E2F6O75461 281 aa6.67□□□□□ -1.34
TRAF3-205ENST00000558700 FAM107AO95990 144 aa6.67□□□□□ -1.34
TRAF3-205ENST00000558700 CRYBA1P05813 215 aa6.67□□□□□ -1.34
TRAF3-205ENST00000558700 LYNP07948 512 aa6.67□□□□□ -1.34
TRAF3-205ENST00000558700 SFTPBP07988 381 aa6.67□□□□□ -1.34
TRAF3-205ENST00000558700 MMP9P14780 707 aa6.67□□□□□ -1.34
TRAF3-205ENST00000558700 OPRL1P41146 370 aa6.67□□□□□ -1.34
TRAF3-205ENST00000558700 NAA10P41227 235 aaPredicted RBP6.67□□□□□ -1.34
TRAF3-205ENST00000558700 GSK3AP49840 483 aa6.67□□□□□ -1.34
TRAF3-205ENST00000558700 RPL15P61313 204 aaKnown RBP6.67□□□□□ -1.34
TRAF3-205ENST00000558700 HOXA4Q00056 320 aaPredicted RBP6.67□□□□□ -1.34
TRAF3-205ENST00000558700 SLC36A1Q7Z2H8 476 aa6.67□□□□□ -1.34
TRAF3-205ENST00000558700 WDR86Q86TI4 376 aa6.67□□□□□ -1.34
TRAF3-205ENST00000558700 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.67□□□□□ -1.34
TRAF3-205ENST00000558700 AQP12AQ8IXF9 295 aa6.67□□□□□ -1.34
TRAF3-205ENST00000558700 TIGD4Q8IY51 512 aa6.67□□□□□ -1.34
TRAF3-205ENST00000558700 ADGRG5Q8IZF4 528 aa6.67□□□□□ -1.34
TRAF3-205ENST00000558700 CMTM4Q8IZR5 234 aa6.67□□□□□ -1.34
TRAF3-205ENST00000558700 KIR3DL3Q8N743 410 aa6.67□□□□□ -1.34
TRAF3-205ENST00000558700 SCCPDHQ8NBX0 429 aa6.67□□□□□ -1.34
TRAF3-205ENST00000558700 OR1M1Q8NGA1 313 aa6.67□□□□□ -1.34
TRAF3-205ENST00000558700 OR4F5Q8NH21 305 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms