RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 PNLIPP16233 465 aa13.71□□□□□ -0.21
AP4E1-202ENST00000558439 SHBQ15464 509 aa13.71□□□□□ -0.21
AP4E1-202ENST00000558439 MPPED2Q15777 294 aa13.71□□□□□ -0.21
AP4E1-202ENST00000558439 UCN2Q96RP3 112 aa13.71□□□□□ -0.21
AP4E1-202ENST00000558439 LOC102725191A0A1B0GVB3 256 aa13.71□□□□□ -0.22
AP4E1-202ENST00000558439 CDC14BO60729 498 aa13.71□□□□□ -0.22
AP4E1-202ENST00000558439 AQP8O94778 261 aa13.71□□□□□ -0.22
AP4E1-202ENST00000558439 RPA2P15927 270 aa13.71□□□□□ -0.22
AP4E1-202ENST00000558439 ROM1Q03395 351 aa13.71□□□□□ -0.22
AP4E1-202ENST00000558439 STPG1Q5TH74 334 aa13.71□□□□□ -0.22
AP4E1-202ENST00000558439 ZFP82Q8N141 532 aa13.71□□□□□ -0.22
AP4E1-202ENST00000558439 SLC38A9Q8NBW4 561 aa13.71□□□□□ -0.22
AP4E1-202ENST00000558439 STRADBQ9C0K7 418 aa13.71□□□□□ -0.22
AP4E1-202ENST00000558439 RBP2P50120 134 aa13.7□□□□□ -0.22
AP4E1-202ENST00000558439 TMEM65Q6PI78 240 aa13.7□□□□□ -0.22
AP4E1-202ENST00000558439 BEND4Q6ZU67 534 aa13.7□□□□□ -0.22
AP4E1-202ENST00000558439 CCDC71LQ8N9Z2 235 aa13.7□□□□□ -0.22
AP4E1-202ENST00000558439 OR51F2Q8NH61 342 aa13.7□□□□□ -0.22
AP4E1-202ENST00000558439 C20orf24Q9BUV8 137 aa13.7□□□□□ -0.22
AP4E1-202ENST00000558439 CRLF2Q9HC73 371 aa13.7□□□□□ -0.22
AP4E1-202ENST00000558439 PIPOXQ9P0Z9 390 aa13.7□□□□□ -0.22
AP4E1-202ENST00000558439 FLVCR1Q9Y5Y0 555 aa13.7□□□□□ -0.22
AP4E1-202ENST00000558439 DNAJC13O75165 2243 aa13.7□□□□□ -0.22
AP4E1-202ENST00000558439 ZNF44P15621 663 aa13.7□□□□□ -0.22
AP4E1-202ENST00000558439 RAB32Q13637 225 aa13.7□□□□□ -0.22
AP4E1-202ENST00000558439 ZNF519Q8TB69 540 aa13.7□□□□□ -0.22
AP4E1-202ENST00000558439 FAAP24Q9BTP7 215 aa13.7□□□□□ -0.22
AP4E1-202ENST00000558439 NOSIPQ9Y314 301 aaKnown RBP13.7□□□□□ -0.22
AP4E1-202ENST00000558439 MASP2O00187 686 aa13.7□□□□□ -0.22
AP4E1-202ENST00000558439 MICBQ29980 383 aa13.7□□□□□ -0.22
AP4E1-202ENST00000558439 ZNF684Q5T5D7 378 aa13.7□□□□□ -0.22
AP4E1-202ENST00000558439 SLC22A25Q6T423 547 aa13.7□□□□□ -0.22
AP4E1-202ENST00000558439 CACNA1GO43497 2377 aa13.69□□□□□ -0.22
AP4E1-202ENST00000558439 H3BUI4 141 aa13.69□□□□□ -0.22
AP4E1-202ENST00000558439 VAMP5O95183 116 aa13.69□□□□□ -0.22
AP4E1-202ENST00000558439 FHL1Q13642 323 aa13.69□□□□□ -0.22
AP4E1-202ENST00000558439 ZNF660Q6AZW8 331 aaPredicted RBP13.69□□□□□ -0.22
AP4E1-202ENST00000558439 NAA40Q86UY6 237 aa13.69□□□□□ -0.22
AP4E1-202ENST00000558439 TMEM217Q8N7C4 229 aa13.69□□□□□ -0.22
AP4E1-202ENST00000558439 ZDHHC22Q8N966 263 aa13.69□□□□□ -0.22
AP4E1-202ENST00000558439 OR13C8Q8NGS7 320 aa13.69□□□□□ -0.22
AP4E1-202ENST00000558439 OR6K3Q8NGY3 331 aa13.69□□□□□ -0.22
AP4E1-202ENST00000558439 MFRPQ9BY79 579 aa13.69□□□□□ -0.22
AP4E1-202ENST00000558439 DNTTIP1Q9H147 329 aa13.69□□□□□ -0.22
AP4E1-202ENST00000558439 C5orf42Q9H799 3197 aa13.69□□□□□ -0.22
AP4E1-202ENST00000558439 CACNA1DQ01668 2161 aa13.69□□□□□ -0.22
AP4E1-202ENST00000558439 SPTA1P02549 2419 aa13.69□□□□□ -0.22
AP4E1-202ENST00000558439 TIAF1O95411 115 aa13.69□□□□□ -0.22
AP4E1-202ENST00000558439 IFI6P09912 130 aa13.69□□□□□ -0.22
AP4E1-202ENST00000558439 CCL4P13236 92 aa13.69□□□□□ -0.22
AP4E1-202ENST00000558439 HOXC12P31275 282 aa13.69□□□□□ -0.22
AP4E1-202ENST00000558439 FCGR2CP31995 323 aa13.69□□□□□ -0.22
AP4E1-202ENST00000558439 RRADP55042 308 aa13.69□□□□□ -0.22
AP4E1-202ENST00000558439 ECH1Q13011 328 aa13.69□□□□□ -0.22
AP4E1-202ENST00000558439 CLEC9AQ6UXN8 241 aa13.69□□□□□ -0.22
AP4E1-202ENST00000558439 BPHLQ86WA6 291 aaPredicted RBP13.69□□□□□ -0.22
AP4E1-202ENST00000558439 ARRDC1Q8N5I2 433 aa13.69□□□□□ -0.22
AP4E1-202ENST00000558439 BVESQ8NE79 360 aa13.69□□□□□ -0.22
AP4E1-202ENST00000558439 NUBPLQ8TB37 319 aa13.69□□□□□ -0.22
AP4E1-202ENST00000558439 C2CD4CQ8TF44 421 aa13.69□□□□□ -0.22
AP4E1-202ENST00000558439 REEP6Q96HR9 211 aa13.69□□□□□ -0.22
AP4E1-202ENST00000558439 UCK1Q9HA47 277 aa13.69□□□□□ -0.22
AP4E1-202ENST00000558439 KCNJ16Q9NPI9 418 aa13.69□□□□□ -0.22
AP4E1-202ENST00000558439 A6NLC8 198 aa13.69□□□□□ -0.22
AP4E1-202ENST00000558439 FAM166BA8MTA8 275 aa13.69□□□□□ -0.22
AP4E1-202ENST00000558439 RAB27BO00194 218 aa13.69□□□□□ -0.22
AP4E1-202ENST00000558439 DUS4LO95620 317 aaKnown RBP13.69□□□□□ -0.22
AP4E1-202ENST00000558439 IKZF1Q13422 519 aa13.69□□□□□ -0.22
AP4E1-202ENST00000558439 FAM213BQ8TBF2 198 aa13.69□□□□□ -0.22
AP4E1-202ENST00000558439 EMG1Q92979 244 aaKnown RBP13.69□□□□□ -0.22
AP4E1-202ENST00000558439 SOX7Q9BT81 388 aa13.69□□□□□ -0.22
AP4E1-202ENST00000558439 LRRK1Q38SD2 2015 aa13.69□□□□□ -0.22
AP4E1-202ENST00000558439 A0A1W2PR77 199 aa13.68□□□□□ -0.22
AP4E1-202ENST00000558439 TK1P04183 234 aa13.68□□□□□ -0.22
AP4E1-202ENST00000558439 TBPP20226 339 aa13.68□□□□□ -0.22
AP4E1-202ENST00000558439 AKR1C3P42330 323 aa13.68□□□□□ -0.22
AP4E1-202ENST00000558439 PIGPP57054 158 aa13.68□□□□□ -0.22
AP4E1-202ENST00000558439 PEA15Q15121 130 aa13.68□□□□□ -0.22
AP4E1-202ENST00000558439 EXT1Q16394 746 aa13.68□□□□□ -0.22
AP4E1-202ENST00000558439 MKXQ8IYA7 352 aa13.68□□□□□ -0.22
AP4E1-202ENST00000558439 ZNF768Q9H5H4 540 aaKnown RBP13.68□□□□□ -0.22
AP4E1-202ENST00000558439 FAM86C1Q9NVL1 165 aa13.68□□□□□ -0.22
AP4E1-202ENST00000558439 FAM96BQ9Y3D0 163 aa13.68□□□□□ -0.22
AP4E1-202ENST00000558439 MED19A0JLT2 244 aaPredicted RBP13.68□□□□□ -0.22
AP4E1-202ENST00000558439 NME2P1O60361 137 aa13.68□□□□□ -0.22
AP4E1-202ENST00000558439 LRP3O75074 770 aa13.68□□□□□ -0.22
AP4E1-202ENST00000558439 B3GALNT1O75752 331 aa13.68□□□□□ -0.22
AP4E1-202ENST00000558439 NRASP01111 189 aa13.68□□□□□ -0.22
AP4E1-202ENST00000558439 DUSP1P28562 367 aa13.68□□□□□ -0.22
AP4E1-202ENST00000558439 RPL12P30050 165 aaKnown RBP13.68□□□□□ -0.22
AP4E1-202ENST00000558439 CEACAM16Q2WEN9 425 aa13.68□□□□□ -0.22
AP4E1-202ENST00000558439 WIPI1Q5MNZ9 446 aaPredicted RBP13.68□□□□□ -0.22
AP4E1-202ENST00000558439 STX12Q86Y82 276 aa13.68□□□□□ -0.22
AP4E1-202ENST00000558439 ARHGEF39Q8N4T4 335 aa13.68□□□□□ -0.22
AP4E1-202ENST00000558439 C2orf50Q96LR7 162 aa13.68□□□□□ -0.22
AP4E1-202ENST00000558439 AKIRIN1Q9H9L7 192 aaPredicted RBP13.68□□□□□ -0.22
AP4E1-202ENST00000558439 ZNHIT1O43257 154 aa13.68□□□□□ -0.22
AP4E1-202ENST00000558439 RAB5BP61020 215 aa13.68□□□□□ -0.22
AP4E1-202ENST00000558439 ZNF774Q6NX45 483 aa13.68□□□□□ -0.22
AP4E1-202ENST00000558439 FBXL14Q8N1E6 418 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms