RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 ZNF680Q8NEM1 530 aa9.22□□□□□ -0.93
TPM1-210ENST00000558264 ADAMTS17Q8TE56 1095 aa9.22□□□□□ -0.93
TPM1-210ENST00000558264 CPNE4Q96A23 557 aaPredicted RBP9.22□□□□□ -0.93
TPM1-210ENST00000558264 INTS12Q96CB8 462 aaKnown RBP9.22□□□□□ -0.93
TPM1-210ENST00000558264 LOXL4Q96JB6 756 aa9.22□□□□□ -0.93
TPM1-210ENST00000558264 ST6GALNAC5Q9BVH7 336 aa9.22□□□□□ -0.93
TPM1-210ENST00000558264 GPR87Q9BY21 358 aa9.22□□□□□ -0.93
TPM1-210ENST00000558264 ZNF224Q9NZL3 707 aa9.22□□□□□ -0.93
TPM1-210ENST00000558264 V9GYS6 101 aa9.22□□□□□ -0.93
TPM1-210ENST00000558264 DOCK7Q96N67 2140 aa9.22□□□□□ -0.93
TPM1-210ENST00000558264 A0A0U1RQV5 110 aa9.21□□□□□ -0.93
TPM1-210ENST00000558264 C21orf140B9A014 251 aa9.21□□□□□ -0.93
TPM1-210ENST00000558264 HLA-AP01891 365 aaKnown RBP9.21□□□□□ -0.93
TPM1-210ENST00000558264 HIST1H1DP16402 221 aaKnown RBP9.21□□□□□ -0.93
TPM1-210ENST00000558264 MGMTP16455 207 aa9.21□□□□□ -0.93
TPM1-210ENST00000558264 AKR1C4P17516 323 aa9.21□□□□□ -0.93
TPM1-210ENST00000558264 PI3P19957 117 aa9.21□□□□□ -0.93
TPM1-210ENST00000558264 LHX2P50458 406 aa9.21□□□□□ -0.93
TPM1-210ENST00000558264 AP2S1P53680 142 aaPredicted RBP9.21□□□□□ -0.93
TPM1-210ENST00000558264 ECH1Q13011 328 aa9.21□□□□□ -0.93
TPM1-210ENST00000558264 DHRS2Q13268 280 aa9.21□□□□□ -0.93
TPM1-210ENST00000558264 RAB35Q15286 201 aa9.21□□□□□ -0.93
TPM1-210ENST00000558264 LRRC37A5PQ49AS3 106 aa9.21□□□□□ -0.93
TPM1-210ENST00000558264 TMPRSS7Q7RTY8 843 aa9.21□□□□□ -0.93
TPM1-210ENST00000558264 VASH2Q86V25 355 aa9.21□□□□□ -0.93
TPM1-210ENST00000558264 CASTOR1Q8WTX7 329 aa9.21□□□□□ -0.93
TPM1-210ENST00000558264 FAM117AQ9C073 453 aa9.21□□□□□ -0.93
TPM1-210ENST00000558264 CHST5Q9GZS9 411 aa9.21□□□□□ -0.93
TPM1-210ENST00000558264 CST11Q9H112 138 aa9.21□□□□□ -0.93
TPM1-210ENST00000558264 WNT5BQ9H1J7 359 aa9.21□□□□□ -0.93
TPM1-210ENST00000558264 OR10A2Q9H208 303 aa9.21□□□□□ -0.93
TPM1-210ENST00000558264 SLCO5A1Q9H2Y9 848 aa9.21□□□□□ -0.93
TPM1-210ENST00000558264 SLC7A10Q9NS82 523 aa9.21□□□□□ -0.93
TPM1-210ENST00000558264 OPN4Q9UHM6 478 aa9.21□□□□□ -0.93
TPM1-210ENST00000558264 CSAG2Q9Y5P2 127 aa9.21□□□□□ -0.93
TPM1-210ENST00000558264 LIPGQ9Y5X9 500 aa9.21□□□□□ -0.93
TPM1-210ENST00000558264 SPAARA0A1B0GVQ0 90 aa9.21□□□□□ -0.94
TPM1-210ENST00000558264 DISC1C4P0D8 188 aa9.21□□□□□ -0.94
TPM1-210ENST00000558264 F5H5P2 479 aa9.21□□□□□ -0.94
TPM1-210ENST00000558264 SDCBPO00560 298 aaPredicted RBP9.21□□□□□ -0.94
TPM1-210ENST00000558264 DNPH1O43598 174 aa9.21□□□□□ -0.94
TPM1-210ENST00000558264 CYTIPO60759 359 aa9.21□□□□□ -0.94
TPM1-210ENST00000558264 MRPL33O75394 65 aaKnown RBP9.21□□□□□ -0.94
TPM1-210ENST00000558264 RGS11O94810 467 aa9.21□□□□□ -0.94
TPM1-210ENST00000558264 ZNF806P0C7X5 589 aa9.21□□□□□ -0.94
TPM1-210ENST00000558264 TMEM225BP0DP42 221 aa9.21□□□□□ -0.94
TPM1-210ENST00000558264 VAMP1P23763 118 aa9.21□□□□□ -0.94
TPM1-210ENST00000558264 BLVRBP30043 206 aaPredicted RBP9.21□□□□□ -0.94
TPM1-210ENST00000558264 THBS4P35443 961 aa9.21□□□□□ -0.94
TPM1-210ENST00000558264 SORDQ00796 357 aa9.21□□□□□ -0.94
TPM1-210ENST00000558264 BAMBIQ13145 260 aa9.21□□□□□ -0.94
TPM1-210ENST00000558264 EXOSC2Q13868 293 aaKnown RBP9.21□□□□□ -0.94
TPM1-210ENST00000558264 TRIP6Q15654 476 aaKnown RBP9.21□□□□□ -0.94
TPM1-210ENST00000558264 MICBQ29980 383 aa9.21□□□□□ -0.94
TPM1-210ENST00000558264 NKAPLQ5M9Q1 402 aa9.21□□□□□ -0.94
TPM1-210ENST00000558264 SEMA6DQ8NFY4 1073 aa9.21□□□□□ -0.94
TPM1-210ENST00000558264 OR4K15Q8NH41 348 aa9.21□□□□□ -0.94
TPM1-210ENST00000558264 CPT1CQ8TCG5 803 aa9.21□□□□□ -0.94
TPM1-210ENST00000558264 SSC4DQ8WTU2 575 aa9.21□□□□□ -0.94
TPM1-210ENST00000558264 SEC22AQ96IW7 307 aa9.21□□□□□ -0.94
TPM1-210ENST00000558264 S100A13Q99584 98 aa9.21□□□□□ -0.94
TPM1-210ENST00000558264 IRF2BPLQ9H1B7 796 aa9.21□□□□□ -0.94
TPM1-210ENST00000558264 FN3KRPQ9HA64 309 aa9.21□□□□□ -0.94
TPM1-210ENST00000558264 PRR13Q9NZ81 148 aa9.21□□□□□ -0.94
TPM1-210ENST00000558264 NOP16Q9Y3C1 178 aaKnown RBP9.21□□□□□ -0.94
TPM1-210ENST00000558264 LAMA5O15230 3695 aa9.2□□□□□ -0.94
TPM1-210ENST00000558264 CNOT1A5YKK6 2376 aaKnown RBP9.2□□□□□ -0.94
TPM1-210ENST00000558264 OR2A4O95047 310 aa9.2□□□□□ -0.94
TPM1-210ENST00000558264 HTR3BO95264 441 aa9.2□□□□□ -0.94
TPM1-210ENST00000558264 IFNA6P05013 189 aa9.2□□□□□ -0.94
TPM1-210ENST00000558264 MTCP1P56278 107 aa9.2□□□□□ -0.94
TPM1-210ENST00000558264 CLDN18P56856 261 aa9.2□□□□□ -0.94
TPM1-210ENST00000558264 RAP2BP61225 183 aa9.2□□□□□ -0.94
TPM1-210ENST00000558264 PPP1R1AQ13522 171 aa9.2□□□□□ -0.94
TPM1-210ENST00000558264 PDCD1Q15116 288 aa9.2□□□□□ -0.94
TPM1-210ENST00000558264 BRICD5Q6PL45 260 aa9.2□□□□□ -0.94
TPM1-210ENST00000558264 ZNF767PQ75MW2 155 aa9.2□□□□□ -0.94
TPM1-210ENST00000558264 C6orf201Q7Z4U5 140 aa9.2□□□□□ -0.94
TPM1-210ENST00000558264 C12orf45Q8N5I9 185 aaPredicted RBP9.2□□□□□ -0.94
TPM1-210ENST00000558264 DEFB124Q8NES8 71 aa9.2□□□□□ -0.94
TPM1-210ENST00000558264 STEAP2Q8NFT2 490 aa9.2□□□□□ -0.94
TPM1-210ENST00000558264 MARCH1Q8TCQ1 289 aa9.2□□□□□ -0.94
TPM1-210ENST00000558264 OR2A7Q96R45 310 aa9.2□□□□□ -0.94
TPM1-210ENST00000558264 HDHD3Q9BSH5 251 aaPredicted RBP9.2□□□□□ -0.94
TPM1-210ENST00000558264 PRRG4Q9BZD6 226 aa9.2□□□□□ -0.94
TPM1-210ENST00000558264 OR2H1Q9GZK4 316 aa9.2□□□□□ -0.94
TPM1-210ENST00000558264 DEFB127Q9H1M4 99 aa9.2□□□□□ -0.94
TPM1-210ENST00000558264 UPB1Q9UBR1 384 aa9.2□□□□□ -0.94
TPM1-210ENST00000558264 B4GALT7Q9UBV7 327 aa9.2□□□□□ -0.94
TPM1-210ENST00000558264 PCDHGA1Q9Y5H4 931 aa9.2□□□□□ -0.94
TPM1-210ENST00000558264 IGKV1-27A0A075B6S5 117 aa9.2□□□□□ -0.94
TPM1-210ENST00000558264 FAM25EA8MYX2 175 aa9.2□□□□□ -0.94
TPM1-210ENST00000558264 ZNF587BE7ETH6 402 aa9.2□□□□□ -0.94
TPM1-210ENST00000558264 L7N2F9 121 aa9.2□□□□□ -0.94
TPM1-210ENST00000558264 M0R233 179 aa9.2□□□□□ -0.94
TPM1-210ENST00000558264 HLA-HP01893 362 aa9.2□□□□□ -0.94
TPM1-210ENST00000558264 MELTFP08582 738 aa9.2□□□□□ -0.94
TPM1-210ENST00000558264 CST2P09228 141 aa9.2□□□□□ -0.94
TPM1-210ENST00000558264 PRF1P14222 555 aa9.2□□□□□ -0.94
TPM1-210ENST00000558264 MEOX1P50221 254 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms