RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 CRYBB2P43320 205 aa8.89□□□□□ -0.99
LRRC28-204ENST00000558172 DSCR9P59020 149 aa8.89□□□□□ -0.99
LRRC28-204ENST00000558172 CCL8P80075 99 aa8.89□□□□□ -0.99
LRRC28-204ENST00000558172 TRAM1Q15629 374 aa8.89□□□□□ -0.99
LRRC28-204ENST00000558172 UBE2UQ5VVX9 321 aa8.89□□□□□ -0.99
LRRC28-204ENST00000558172 SHEQ5VZ18 495 aa8.89□□□□□ -0.99
LRRC28-204ENST00000558172 TMEM42Q69YG0 159 aa8.89□□□□□ -0.99
LRRC28-204ENST00000558172 SERPINA12Q8IW75 414 aa8.89□□□□□ -0.99
LRRC28-204ENST00000558172 ZFP41Q8N8Y5 198 aa8.89□□□□□ -0.99
LRRC28-204ENST00000558172 TSPAN14Q8NG11 270 aa8.89□□□□□ -0.99
LRRC28-204ENST00000558172 OR5A2Q8NGI9 324 aa8.89□□□□□ -0.99
LRRC28-204ENST00000558172 OR5D14Q8NGL3 314 aa8.89□□□□□ -0.99
LRRC28-204ENST00000558172 OR13C3Q8NGS6 347 aa8.89□□□□□ -0.99
LRRC28-204ENST00000558172 UBASH3BQ8TF42 649 aa8.89□□□□□ -0.99
LRRC28-204ENST00000558172 TSEN15Q8WW01 171 aaKnown RBP8.89□□□□□ -0.99
LRRC28-204ENST00000558172 GTF3AQ92664 365 aaKnown RBP8.89□□□□□ -0.99
LRRC28-204ENST00000558172 RDH5Q92781 318 aa8.89□□□□□ -0.99
LRRC28-204ENST00000558172 FGGYQ96C11 551 aa8.89□□□□□ -0.99
LRRC28-204ENST00000558172 PGLYRP3Q96LB9 341 aa8.89□□□□□ -0.99
LRRC28-204ENST00000558172 OR2V2Q96R30 315 aa8.89□□□□□ -0.99
LRRC28-204ENST00000558172 RTL8AQ9BWD3 113 aa8.89□□□□□ -0.99
LRRC28-204ENST00000558172 NEK6Q9HC98 313 aa8.89□□□□□ -0.99
LRRC28-204ENST00000558172 VCX3AQ9NNX9 186 aa8.89□□□□□ -0.99
LRRC28-204ENST00000558172 DLL4Q9NR61 685 aa8.89□□□□□ -0.99
LRRC28-204ENST00000558172 CREBBPQ92793 2442 aa8.88□□□□□ -0.99
LRRC28-204ENST00000558172 ANKRD61A6NGH8 418 aa8.88□□□□□ -0.99
LRRC28-204ENST00000558172 OR5B21A6NL26 309 aa8.88□□□□□ -0.99
LRRC28-204ENST00000558172 TMEM210A6NLX4 147 aa8.88□□□□□ -0.99
LRRC28-204ENST00000558172 F5H5P2 479 aa8.88□□□□□ -0.99
LRRC28-204ENST00000558172 H3BSH0 61 aa8.88□□□□□ -0.99
LRRC28-204ENST00000558172 SSX4O60224 188 aa8.88□□□□□ -0.99
LRRC28-204ENST00000558172 NDUFS7O75251 213 aa8.88□□□□□ -0.99
LRRC28-204ENST00000558172 ALX3O95076 343 aa8.88□□□□□ -0.99
LRRC28-204ENST00000558172 PTBP3O95758 552 aaKnown RBP8.88□□□□□ -0.99
LRRC28-204ENST00000558172 CSF3P09919 207 aa8.88□□□□□ -0.99
LRRC28-204ENST00000558172 OCM2P0CE71 109 aa8.88□□□□□ -0.99
LRRC28-204ENST00000558172 DAOP14920 347 aa8.88□□□□□ -0.99
LRRC28-204ENST00000558172 PSMA1P25786 263 aaKnown RBP8.88□□□□□ -0.99
LRRC28-204ENST00000558172 GATA4P43694 442 aa8.88□□□□□ -0.99
LRRC28-204ENST00000558172 MAB21L1Q13394 359 aa8.88□□□□□ -0.99
LRRC28-204ENST00000558172 CNN3Q15417 329 aaKnown RBP8.88□□□□□ -0.99
LRRC28-204ENST00000558172 CEACAM21Q3KPI0 293 aa8.88□□□□□ -0.99
LRRC28-204ENST00000558172 Q499Y3 187 aa8.88□□□□□ -0.99
LRRC28-204ENST00000558172 ARMCX4Q5H9R4 360 aa8.88□□□□□ -0.99
LRRC28-204ENST00000558172 MOB3CQ70IA8 216 aa8.88□□□□□ -0.99
LRRC28-204ENST00000558172 UTS2BQ765I0 119 aa8.88□□□□□ -0.99
LRRC28-204ENST00000558172 PARP16Q8N5Y8 322 aa8.88□□□□□ -0.99
LRRC28-204ENST00000558172 OR10AD1Q8NGE0 317 aa8.88□□□□□ -0.99
LRRC28-204ENST00000558172 OR51A4Q8NGJ6 313 aa8.88□□□□□ -0.99
LRRC28-204ENST00000558172 OR10AC1Q8NH08 325 aa8.88□□□□□ -0.99
LRRC28-204ENST00000558172 ITLN1Q8WWA0 313 aa8.88□□□□□ -0.99
LRRC28-204ENST00000558172 OR5P3Q8WZ94 311 aa8.88□□□□□ -0.99
LRRC28-204ENST00000558172 ITPKCQ96DU7 683 aa8.88□□□□□ -0.99
LRRC28-204ENST00000558172 MEGF10Q96KG7 1140 aa8.88□□□□□ -0.99
LRRC28-204ENST00000558172 CHST5Q9GZS9 411 aa8.88□□□□□ -0.99
LRRC28-204ENST00000558172 SLC7A11Q9UPY5 501 aa8.88□□□□□ -0.99
LRRC28-204ENST00000558172 CSMD2Q7Z408 3487 aa8.87□□□□□ -0.99
LRRC28-204ENST00000558172 IGHV1-69-2A0A0G2JMI3 117 aa8.87□□□□□ -0.99
LRRC28-204ENST00000558172 TRBV5-5A0A0J9YX44 114 aa8.87□□□□□ -0.99
LRRC28-204ENST00000558172 PNMA8CA0A1B0GUJ8 204 aa8.87□□□□□ -0.99
LRRC28-204ENST00000558172 NDUFS8O00217 210 aa8.87□□□□□ -0.99
LRRC28-204ENST00000558172 NCR1O76036 304 aa8.87□□□□□ -0.99
LRRC28-204ENST00000558172 MAPK3P27361 379 aaPredicted RBP8.87□□□□□ -0.99
LRRC28-204ENST00000558172 PDLIM4P50479 330 aa8.87□□□□□ -0.99
LRRC28-204ENST00000558172 FUT6P51993 359 aa8.87□□□□□ -0.99
LRRC28-204ENST00000558172 ART1P52961 327 aa8.87□□□□□ -0.99
LRRC28-204ENST00000558172 TMEM33P57088 247 aa8.87□□□□□ -0.99
LRRC28-204ENST00000558172 RPS11P62280 158 aaKnown RBP eCLIP8.87□□□□□ -0.99
LRRC28-204ENST00000558172 GNG3P63215 75 aa8.87□□□□□ -0.99
LRRC28-204ENST00000558172 DOC2BQ14184 412 aa8.87□□□□□ -0.99
LRRC28-204ENST00000558172 ZNF181Q2M3W8 571 aa8.87□□□□□ -0.99
LRRC28-204ENST00000558172 HFEQ30201 348 aa8.87□□□□□ -0.99
LRRC28-204ENST00000558172 FAM76BQ5HYJ3 339 aa8.87□□□□□ -0.99
LRRC28-204ENST00000558172 SYT6Q5T7P8 510 aaPredicted RBP8.87□□□□□ -0.99
LRRC28-204ENST00000558172 LIPKQ5VXJ0 399 aa8.87□□□□□ -0.99
LRRC28-204ENST00000558172 PLCXD3Q63HM9 321 aa8.87□□□□□ -0.99
LRRC28-204ENST00000558172 CLEC2AQ6UVW9 174 aa8.87□□□□□ -0.99
LRRC28-204ENST00000558172 KCTD8Q6ZWB6 473 aa8.87□□□□□ -0.99
LRRC28-204ENST00000558172 PHC2Q8IXK0 858 aa8.87□□□□□ -0.99
LRRC28-204ENST00000558172 DNAAF1Q8NEP3 725 aa8.87□□□□□ -0.99
LRRC28-204ENST00000558172 RGP1Q92546 391 aaPredicted RBP8.87□□□□□ -0.99
LRRC28-204ENST00000558172 HPS1Q92902 700 aa8.87□□□□□ -0.99
LRRC28-204ENST00000558172 TMEM106AQ96A25 262 aa8.87□□□□□ -0.99
LRRC28-204ENST00000558172 ADAT3Q96EY9 351 aaPredicted RBP8.87□□□□□ -0.99
LRRC28-204ENST00000558172 RNF170Q96K19 258 aa8.87□□□□□ -0.99
LRRC28-204ENST00000558172 OPALINQ96PE5 141 aa8.87□□□□□ -0.99
LRRC28-204ENST00000558172 ZCCHC4Q9H5U6 513 aa8.87□□□□□ -0.99
LRRC28-204ENST00000558172 CHODLQ9H9P2 273 aa8.87□□□□□ -0.99
LRRC28-204ENST00000558172 FN3KRPQ9HA64 309 aa8.87□□□□□ -0.99
LRRC28-204ENST00000558172 GPR173Q9NS66 373 aa8.87□□□□□ -0.99
LRRC28-204ENST00000558172 PPP1R3CQ9UQK1 317 aa8.87□□□□□ -0.99
LRRC28-204ENST00000558172 CSMD1Q96PZ7 3565 aa8.87□□□□□ -0.99
LRRC28-204ENST00000558172 DOCK11Q5JSL3 2073 aa8.87□□□□□ -0.99
LRRC28-204ENST00000558172 LOC100289279A0A1B0GTE1 492 aa8.86□□□□□ -0.99
LRRC28-204ENST00000558172 MAGEA13PA6NCF6 341 aa8.86□□□□□ -0.99
LRRC28-204ENST00000558172 A6NIN4 97 aa8.86□□□□□ -0.99
LRRC28-204ENST00000558172 TRIM64CA6NLI5 447 aa8.86□□□□□ -0.99
LRRC28-204ENST00000558172 LRRC30A6NM36 301 aa8.86□□□□□ -0.99
LRRC28-204ENST00000558172 ZNF879B4DU55 563 aa8.86□□□□□ -0.99
LRRC28-204ENST00000558172 ZNF732B4DXR9 585 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms