RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 NEK6Q9HC98 313 aa4.41□□□□□ -1.7
RTF1-204ENST00000558117 PURGQ9UJV8 347 aaKnown RBP4.41□□□□□ -1.7
RTF1-204ENST00000558117 MRTO4Q9UKD2 239 aaKnown RBP4.41□□□□□ -1.7
RTF1-204ENST00000558117 LRP1BQ9NZR2 4599 aa4.4□□□□□ -1.7
RTF1-204ENST00000558117 OR51F1A6NGY5 319 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 A8MXK9 166 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 hCG_2039718K7EN88 272 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 MLNRO43193 412 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 RAD51CO43502 376 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 PSIP1O75475 530 aaKnown RBP4.4□□□□□ -1.71
RTF1-204ENST00000558117 IFNW1P05000 195 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 SERPIND1P05546 499 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 ADRA2AP08913 450 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 OR8G3PP0DMU2 310 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 CPN2P22792 545 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 BMI1P35226 326 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 BTN3A2P78410 334 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 HMGCS1Q01581 520 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 RGS1Q08116 209 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 RIGQ13278 110 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 TMED2Q15363 201 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 PPP1R3AQ16821 1122 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 SPANXN2Q5MJ10 180 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 OR5M10Q6IEU7 315 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 SLC27A4Q6P1M0 643 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 CCDC36Q8IYA8 594 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 KATNAL2Q8IYT4 538 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 OFCC1Q8IZS5 231 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 ABHD12Q8N2K0 398 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 PARP8Q8N3A8 854 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 MMGT1Q8N4V1 131 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 PRELID2Q8N945 189 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 WDR31Q8NA23 367 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 SPERTQ8NA61 448 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 OR52B6Q8NGF0 335 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 OR52E2Q8NGJ4 325 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 OR5M1Q8NGP8 315 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 OR10D3Q8NH80 312 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 ACTRT1Q8TDG2 376 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 RPL3LQ92901 407 aaKnown RBP4.4□□□□□ -1.71
RTF1-204ENST00000558117 PPWD1Q96BP3 646 aaKnown RBP4.4□□□□□ -1.71
RTF1-204ENST00000558117 ISOC1Q96CN7 298 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 BPIFA2Q96DR5 249 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 ANKRD27Q96NW4 1050 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 SIKE1Q9BRV8 207 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 CHRDL1Q9BU40 450 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 ROPN1BQ9BZX4 212 aaPredicted RBP4.4□□□□□ -1.71
RTF1-204ENST00000558117 TPK1Q9H3S4 243 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 RAB18Q9NP72 206 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 NLE1Q9NVX2 485 aaPredicted RBP4.4□□□□□ -1.71
RTF1-204ENST00000558117 TECRQ9NZ01 308 aaKnown RBP4.4□□□□□ -1.71
RTF1-204ENST00000558117 KLRF1Q9NZS2 232 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 ZNF346Q9UL40 294 aaKnown RBP4.4□□□□□ -1.71
RTF1-204ENST00000558117 MCTS1Q9ULC4 181 aaKnown RBP4.4□□□□□ -1.71
RTF1-204ENST00000558117 KLHDC2Q9Y2U9 406 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 NOSIPQ9Y314 301 aaKnown RBP4.4□□□□□ -1.71
RTF1-204ENST00000558117 IFT52Q9Y366 437 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.4□□□□□ -1.71
RTF1-204ENST00000558117 COMMD3-BMI1R4GMX3 469 aa4.4□□□□□ -1.71
RTF1-204ENST00000558117 hCG_1818297A0A087WSY0 165 aa4.39□□□□□ -1.71
RTF1-204ENST00000558117 IGHV3-38A0A0C4DH36 116 aa4.39□□□□□ -1.71
RTF1-204ENST00000558117 IQANK1A0A1B0GTG1 560 aa4.39□□□□□ -1.71
RTF1-204ENST00000558117 hCG_38984A0A1B0GV85 526 aa4.39□□□□□ -1.71
RTF1-204ENST00000558117 WASHC1A8K0Z3 465 aa4.39□□□□□ -1.71
RTF1-204ENST00000558117 C17orf51A8MQB3 221 aa4.39□□□□□ -1.71
RTF1-204ENST00000558117 TRAPPC2LH3BP13 241 aa4.39□□□□□ -1.71
RTF1-204ENST00000558117 H7C0C1 242 aa4.39□□□□□ -1.71
RTF1-204ENST00000558117 PSTPIP1O43586 416 aa4.39□□□□□ -1.71
RTF1-204ENST00000558117 CXCL13O43927 109 aa4.39□□□□□ -1.71
RTF1-204ENST00000558117 CST8O60676 142 aa4.39□□□□□ -1.71
RTF1-204ENST00000558117 NPPAP01160 153 aa4.39□□□□□ -1.71
RTF1-204ENST00000558117 IGHV3-13P01766 116 aa4.39□□□□□ -1.71
RTF1-204ENST00000558117 KRT14P02533 472 aa4.39□□□□□ -1.71
RTF1-204ENST00000558117 ANXA4P09525 319 aaPredicted RBP4.39□□□□□ -1.71
RTF1-204ENST00000558117 RBMY1A1P0DJD3 496 aaKnown RBP4.39□□□□□ -1.71
RTF1-204ENST00000558117 DBTP11182 482 aaKnown RBP4.39□□□□□ -1.71
RTF1-204ENST00000558117 C4BPBP20851 252 aa4.39□□□□□ -1.71
RTF1-204ENST00000558117 CDKN2BP42772 138 aa4.39□□□□□ -1.71
RTF1-204ENST00000558117 LIM2P55344 173 aa4.39□□□□□ -1.71
RTF1-204ENST00000558117 DSCR4P56555 118 aaPredicted RBP4.39□□□□□ -1.71
RTF1-204ENST00000558117 SEC61GP60059 68 aa4.39□□□□□ -1.71
RTF1-204ENST00000558117 VSNL1P62760 191 aa4.39□□□□□ -1.71
RTF1-204ENST00000558117 HERVK_113P63132 956 aa4.39□□□□□ -1.71
RTF1-204ENST00000558117 ERVK-8P63133 956 aa4.39□□□□□ -1.71
RTF1-204ENST00000558117 IGLV3-21P80748 117 aaPredicted RBP4.39□□□□□ -1.71
RTF1-204ENST00000558117 MRPS11P82912 194 aaKnown RBP4.39□□□□□ -1.71
RTF1-204ENST00000558117 FGL1Q08830 312 aa4.39□□□□□ -1.71
RTF1-204ENST00000558117 SPANXN4Q5MJ08 99 aa4.39□□□□□ -1.71
RTF1-204ENST00000558117 AVPI1Q5T686 147 aa4.39□□□□□ -1.71
RTF1-204ENST00000558117 RAET1LQ5VY80 246 aa4.39□□□□□ -1.71
RTF1-204ENST00000558117 TMEM225Q6GV28 225 aa4.39□□□□□ -1.71
RTF1-204ENST00000558117 COMTD1Q86VU5 262 aa4.39□□□□□ -1.71
RTF1-204ENST00000558117 ARFGAP2Q8N6H7 521 aa4.39□□□□□ -1.71
RTF1-204ENST00000558117 BPIFCQ8NFQ6 507 aa4.39□□□□□ -1.71
RTF1-204ENST00000558117 OR5AU1Q8NGC0 362 aa4.39□□□□□ -1.71
RTF1-204ENST00000558117 ABHD3Q8WU67 409 aa4.39□□□□□ -1.71
RTF1-204ENST00000558117 ADIPOR1Q96A54 375 aa4.39□□□□□ -1.71
RTF1-204ENST00000558117 OLFM3Q96PB7 478 aa4.39□□□□□ -1.71
RTF1-204ENST00000558117 APOL2Q9BQE5 337 aa4.39□□□□□ -1.71
RTF1-204ENST00000558117 ZNF670Q9BS34 389 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms