RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 YIF1BQ5BJH7 314 aa18.04■□□□□ 0.48
CASC4-204ENST00000557945 ARMCX4Q5H9R4 360 aa18.04■□□□□ 0.48
CASC4-204ENST00000557945 CEP78Q5JTW2 689 aa18.04■□□□□ 0.48
CASC4-204ENST00000557945 UBE2UQ5VVX9 321 aa18.04■□□□□ 0.48
CASC4-204ENST00000557945 PLCXD3Q63HM9 321 aa18.04■□□□□ 0.48
CASC4-204ENST00000557945 KCTD8Q6ZWB6 473 aa18.04■□□□□ 0.48
CASC4-204ENST00000557945 LRRC75A-AS1Q8N1F1 130 aa18.04■□□□□ 0.48
CASC4-204ENST00000557945 SPERTQ8NA61 448 aa18.04■□□□□ 0.48
CASC4-204ENST00000557945 C10orf35Q96D05 121 aa18.04■□□□□ 0.48
CASC4-204ENST00000557945 ADAT3Q96EY9 351 aaPredicted RBP18.04■□□□□ 0.48
CASC4-204ENST00000557945 MEGF10Q96KG7 1140 aa18.04■□□□□ 0.48
CASC4-204ENST00000557945 TMED9Q9BVK6 235 aa18.04■□□□□ 0.48
CASC4-204ENST00000557945 IL19Q9UHD0 177 aa18.04■□□□□ 0.48
CASC4-204ENST00000557945 ANKRD61A6NGH8 418 aa18.04■□□□□ 0.48
CASC4-204ENST00000557945 SERPINA3P01011 423 aa18.04■□□□□ 0.48
CASC4-204ENST00000557945 OCM2P0CE71 109 aa18.04■□□□□ 0.48
CASC4-204ENST00000557945 DAOP14920 347 aa18.04■□□□□ 0.48
CASC4-204ENST00000557945 CPEP16870 476 aa18.04■□□□□ 0.48
CASC4-204ENST00000557945 MZT1Q08AG7 82 aa18.04■□□□□ 0.48
CASC4-204ENST00000557945 GPR50Q13585 617 aa18.04■□□□□ 0.48
CASC4-204ENST00000557945 TPBGQ13641 420 aa18.04■□□□□ 0.48
CASC4-204ENST00000557945 TESK1Q15569 626 aa18.04■□□□□ 0.48
CASC4-204ENST00000557945 CARTPTQ16568 116 aa18.04■□□□□ 0.48
CASC4-204ENST00000557945 DMRTC1Q5HYR2 192 aa18.04■□□□□ 0.48
CASC4-204ENST00000557945 KRT74Q7RTS7 529 aa18.04■□□□□ 0.48
CASC4-204ENST00000557945 UBASH3BQ8TF42 649 aa18.04■□□□□ 0.48
CASC4-204ENST00000557945 C14orf119Q9NWQ9 140 aa18.04■□□□□ 0.48
CASC4-204ENST00000557945 ITGB1BP2Q9UKP3 347 aa18.04■□□□□ 0.48
CASC4-204ENST00000557945 CDC14BO60729 498 aa18.03■□□□□ 0.48
CASC4-204ENST00000557945 GATBO75879 557 aaKnown RBP18.03■□□□□ 0.48
CASC4-204ENST00000557945 INMTO95050 263 aa18.03■□□□□ 0.48
CASC4-204ENST00000557945 CD2P06729 351 aa18.03■□□□□ 0.48
CASC4-204ENST00000557945 TNFRSF1AP19438 455 aa18.03■□□□□ 0.48
CASC4-204ENST00000557945 CD200P41217 278 aa18.03■□□□□ 0.48
CASC4-204ENST00000557945 MAB21L1Q13394 359 aa18.03■□□□□ 0.48
CASC4-204ENST00000557945 TMEM42Q69YG0 159 aa18.03■□□□□ 0.48
CASC4-204ENST00000557945 PP6455Q8WZ26 134 aa18.03■□□□□ 0.48
CASC4-204ENST00000557945 OR5P3Q8WZ94 311 aa18.03■□□□□ 0.48
CASC4-204ENST00000557945 ITPKCQ96DU7 683 aa18.03■□□□□ 0.48
CASC4-204ENST00000557945 RNF170Q96K19 258 aa18.03■□□□□ 0.48
CASC4-204ENST00000557945 RTL8AQ9BWD3 113 aa18.03■□□□□ 0.48
CASC4-204ENST00000557945 VCX3AQ9NNX9 186 aa18.03■□□□□ 0.48
CASC4-204ENST00000557945 TREM2Q9NZC2 230 aa18.03■□□□□ 0.48
CASC4-204ENST00000557945 SETXQ7Z333 2677 aaKnown RBP18.02■□□□□ 0.48
CASC4-204ENST00000557945 CSMD2Q7Z408 3487 aa18.02■□□□□ 0.48
CASC4-204ENST00000557945 IGHV1-69-2A0A0G2JMI3 117 aa18.02■□□□□ 0.47
CASC4-204ENST00000557945 LYNX1G3V0Z9 82 aa18.02■□□□□ 0.47
CASC4-204ENST00000557945 GRPP07492 148 aa18.02■□□□□ 0.47
CASC4-204ENST00000557945 LYNX1P0DP58 116 aa18.02■□□□□ 0.47
CASC4-204ENST00000557945 ART1P52961 327 aa18.02■□□□□ 0.47
CASC4-204ENST00000557945 RPS11P62280 158 aaKnown RBP eCLIP18.02■□□□□ 0.47
CASC4-204ENST00000557945 CEACAM21Q3KPI0 293 aa18.02■□□□□ 0.47
CASC4-204ENST00000557945 PRAMEF6Q5VXH4 476 aa18.02■□□□□ 0.47
CASC4-204ENST00000557945 PHC2Q8IXK0 858 aa18.02■□□□□ 0.47
CASC4-204ENST00000557945 MS4A15Q8N5U1 240 aa18.02■□□□□ 0.47
CASC4-204ENST00000557945 HPSE2Q8WWQ2 592 aa18.02■□□□□ 0.47
CASC4-204ENST00000557945 RDH5Q92781 318 aa18.02■□□□□ 0.47
CASC4-204ENST00000557945 TMEM203Q969S6 136 aa18.02■□□□□ 0.47
CASC4-204ENST00000557945 CHST5Q9GZS9 411 aa18.02■□□□□ 0.47
CASC4-204ENST00000557945 TRBV5-5A0A0J9YX44 114 aa18.01■□□□□ 0.47
CASC4-204ENST00000557945 CYSRT1A8MQ03 144 aa18.01■□□□□ 0.47
CASC4-204ENST00000557945 OCMP0CE72 109 aaPredicted RBP18.01■□□□□ 0.47
CASC4-204ENST00000557945 Q499Y3 187 aa18.01■□□□□ 0.47
CASC4-204ENST00000557945 SERPINA12Q8IW75 414 aa18.01■□□□□ 0.47
CASC4-204ENST00000557945 ZNF525Q8N782 197 aa18.01■□□□□ 0.47
CASC4-204ENST00000557945 CELF2-AS1Q8N7Q2 184 aa18.01■□□□□ 0.47
CASC4-204ENST00000557945 OR5D14Q8NGL3 314 aa18.01■□□□□ 0.47
CASC4-204ENST00000557945 NPRL2Q8WTW4 380 aa18.01■□□□□ 0.47
CASC4-204ENST00000557945 TMEM106AQ96A25 262 aa18.01■□□□□ 0.47
CASC4-204ENST00000557945 OR14A2Q96R54 314 aa18.01■□□□□ 0.47
CASC4-204ENST00000557945 FOXC2Q99958 501 aa18.01■□□□□ 0.47
CASC4-204ENST00000557945 UFSP2Q9NUQ7 469 aa18.01■□□□□ 0.47
CASC4-204ENST00000557945 SLC7A11Q9UPY5 501 aa18.01■□□□□ 0.47
CASC4-204ENST00000557945 LOC100289279A0A1B0GTE1 492 aa18■□□□□ 0.47
CASC4-204ENST00000557945 A6NLC8 198 aa18■□□□□ 0.47
CASC4-204ENST00000557945 ZNF732B4DXR9 585 aa18■□□□□ 0.47
CASC4-204ENST00000557945 COL8A2P25067 703 aa18■□□□□ 0.47
CASC4-204ENST00000557945 THBS2P35442 1172 aa18■□□□□ 0.47
CASC4-204ENST00000557945 CRYBB2P43320 205 aa18■□□□□ 0.47
CASC4-204ENST00000557945 GPM6AP51674 278 aa18■□□□□ 0.47
CASC4-204ENST00000557945 RPS25P62851 125 aaKnown RBP18■□□□□ 0.47
CASC4-204ENST00000557945 UBE2V2Q15819 145 aa18■□□□□ 0.47
CASC4-204ENST00000557945 MOGAT3Q86VF5 341 aa18■□□□□ 0.47
CASC4-204ENST00000557945 PARP16Q8N5Y8 322 aa18■□□□□ 0.47
CASC4-204ENST00000557945 OR5A2Q8NGI9 324 aa18■□□□□ 0.47
CASC4-204ENST00000557945 OR13C9Q8NGT0 318 aa18■□□□□ 0.47
CASC4-204ENST00000557945 TRMT10AQ8TBZ6 339 aaKnown RBP18■□□□□ 0.47
CASC4-204ENST00000557945 CCL17Q92583 94 aa18■□□□□ 0.47
CASC4-204ENST00000557945 FGF23Q9GZV9 251 aaPredicted RBP18■□□□□ 0.47
CASC4-204ENST00000557945 ZCCHC4Q9H5U6 513 aa18■□□□□ 0.47
CASC4-204ENST00000557945 PPP1R3CQ9UQK1 317 aa18■□□□□ 0.47
CASC4-204ENST00000557945 CACNG2Q9Y698 323 aa18■□□□□ 0.47
CASC4-204ENST00000557945 CCDC168Q8NDH2 2452 aa17.99■□□□□ 0.47
CASC4-204ENST00000557945 A0A1W2PPK0 400 aa17.99■□□□□ 0.47
CASC4-204ENST00000557945 ZNF879B4DU55 563 aa17.99■□□□□ 0.47
CASC4-204ENST00000557945 GNG3P63215 75 aa17.99■□□□□ 0.47
CASC4-204ENST00000557945 CNN3Q15417 329 aaKnown RBP17.99■□□□□ 0.47
CASC4-204ENST00000557945 SSX1Q16384 188 aa17.99■□□□□ 0.47
CASC4-204ENST00000557945 HFEQ30201 348 aa17.99■□□□□ 0.47
CASC4-204ENST00000557945 ACSM3Q53FZ2 586 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms