RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.08□□□□□ -0.48
SHMT2-235ENST00000557740 NDUFB3O43676 98 aa12.08□□□□□ -0.48
SHMT2-235ENST00000557740 FCN3O75636 299 aa12.08□□□□□ -0.48
SHMT2-235ENST00000557740 NDUFA7O95182 113 aa12.08□□□□□ -0.48
SHMT2-235ENST00000557740 HMGN1P05114 100 aa12.08□□□□□ -0.48
SHMT2-235ENST00000557740 HOXB6P17509 224 aaKnown RBP12.08□□□□□ -0.48
SHMT2-235ENST00000557740 PSMA6P60900 246 aaKnown RBP12.08□□□□□ -0.48
SHMT2-235ENST00000557740 ELF3P78545 371 aaPredicted RBP12.08□□□□□ -0.48
SHMT2-235ENST00000557740 PRDX4Q13162 271 aa12.08□□□□□ -0.48
SHMT2-235ENST00000557740 LRRC10Q5BKY1 277 aa12.08□□□□□ -0.48
SHMT2-235ENST00000557740 TREML4Q6UXN2 200 aa12.08□□□□□ -0.48
SHMT2-235ENST00000557740 VMO1Q7Z5L0 202 aa12.08□□□□□ -0.48
SHMT2-235ENST00000557740 AQP12AQ8IXF9 295 aa12.08□□□□□ -0.48
SHMT2-235ENST00000557740 PDZD9Q8IXQ8 264 aa12.08□□□□□ -0.48
SHMT2-235ENST00000557740 CANT1Q8WVQ1 401 aa12.08□□□□□ -0.48
SHMT2-235ENST00000557740 WFDC12Q8WWY7 111 aa12.08□□□□□ -0.48
SHMT2-235ENST00000557740 SEH1LQ96EE3 360 aa12.08□□□□□ -0.48
SHMT2-235ENST00000557740 PKP2Q99959 881 aa12.08□□□□□ -0.48
SHMT2-235ENST00000557740 THTPAQ9BU02 230 aa12.08□□□□□ -0.48
SHMT2-235ENST00000557740 PPP1R3EQ9H7J1 279 aa12.08□□□□□ -0.48
SHMT2-235ENST00000557740 NIPAL2Q9H841 368 aa12.08□□□□□ -0.48
SHMT2-235ENST00000557740 C1RLQ9NZP8 487 aa12.08□□□□□ -0.48
SHMT2-235ENST00000557740 ZNF391Q9UJN7 358 aa12.08□□□□□ -0.48
SHMT2-235ENST00000557740 FAM96BQ9Y3D0 163 aa12.08□□□□□ -0.48
SHMT2-235ENST00000557740 A0A0U1RQK1 487 aa12.07□□□□□ -0.48
SHMT2-235ENST00000557740 ZNF850A8MQ14 1090 aa12.07□□□□□ -0.48
SHMT2-235ENST00000557740 ACOT8O14734 319 aa12.07□□□□□ -0.48
SHMT2-235ENST00000557740 GPR37O15354 613 aa12.07□□□□□ -0.48
SHMT2-235ENST00000557740 T-ENOLP0DO92 83 aa12.07□□□□□ -0.48
SHMT2-235ENST00000557740 OSMP13725 252 aa12.07□□□□□ -0.48
SHMT2-235ENST00000557740 ACKR3P25106 362 aa12.07□□□□□ -0.48
SHMT2-235ENST00000557740 RPL15P61313 204 aaKnown RBP12.07□□□□□ -0.48
SHMT2-235ENST00000557740 OLFML2AQ68BL7 652 aa12.07□□□□□ -0.48
SHMT2-235ENST00000557740 KRT77Q7Z794 578 aa12.07□□□□□ -0.48
SHMT2-235ENST00000557740 TMEM179BQ7Z7N9 219 aa12.07□□□□□ -0.48
SHMT2-235ENST00000557740 CPOQ8IVL8 374 aa12.07□□□□□ -0.48
SHMT2-235ENST00000557740 FGFRL1Q8N441 504 aa12.07□□□□□ -0.48
SHMT2-235ENST00000557740 KIR3DL3Q8N743 410 aa12.07□□□□□ -0.48
SHMT2-235ENST00000557740 OR8B12Q8NGG6 310 aa12.07□□□□□ -0.48
SHMT2-235ENST00000557740 OR10Z1Q8NGY1 313 aa12.07□□□□□ -0.48
SHMT2-235ENST00000557740 FAM81AQ8TBF8 368 aa12.07□□□□□ -0.48
SHMT2-235ENST00000557740 OR5P3Q8WZ94 311 aa12.07□□□□□ -0.48
SHMT2-235ENST00000557740 H1FXQ92522 213 aaKnown RBP12.07□□□□□ -0.48
SHMT2-235ENST00000557740 RPL3LQ92901 407 aaKnown RBP12.07□□□□□ -0.48
SHMT2-235ENST00000557740 C1orf21Q9H246 121 aa12.07□□□□□ -0.48
SHMT2-235ENST00000557740 HAO2Q9NYQ3 351 aa12.07□□□□□ -0.48
SHMT2-235ENST00000557740 TAS2R1Q9NYW7 299 aa12.07□□□□□ -0.48
SHMT2-235ENST00000557740 LAMP5Q9UJQ1 280 aa12.07□□□□□ -0.48
SHMT2-235ENST00000557740 KLHDC2Q9Y2U9 406 aa12.07□□□□□ -0.48
SHMT2-235ENST00000557740 CAB39Q9Y376 341 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-235ENST00000557740 PKD1L1Q8TDX9 2849 aa12.06□□□□□ -0.48
SHMT2-235ENST00000557740 CST4P01036 141 aa12.06□□□□□ -0.48
SHMT2-235ENST00000557740 IGHV4-59P01825 116 aa12.06□□□□□ -0.48
SHMT2-235ENST00000557740 ANXA8P13928 327 aa12.06□□□□□ -0.48
SHMT2-235ENST00000557740 FLOT2Q14254 428 aa12.06□□□□□ -0.48
SHMT2-235ENST00000557740 SLC35D3Q5M8T2 416 aa12.06□□□□□ -0.48
SHMT2-235ENST00000557740 STUMQ69YW2 141 aa12.06□□□□□ -0.48
SHMT2-235ENST00000557740 BRICD5Q6PL45 260 aa12.06□□□□□ -0.48
SHMT2-235ENST00000557740 COMMD2Q86X83 199 aa12.06□□□□□ -0.48
SHMT2-235ENST00000557740 LDLRAD3Q86YD5 345 aa12.06□□□□□ -0.48
SHMT2-235ENST00000557740 ZDHHC23Q8IYP9 409 aa12.06□□□□□ -0.48
SHMT2-235ENST00000557740 PAPD5Q8NDF8 572 aaKnown RBP12.06□□□□□ -0.48
SHMT2-235ENST00000557740 BBS1Q8NFJ9 593 aa12.06□□□□□ -0.48
SHMT2-235ENST00000557740 OR5T2Q8NGG2 359 aa12.06□□□□□ -0.48
SHMT2-235ENST00000557740 PIGCQ92535 297 aa12.06□□□□□ -0.48
SHMT2-235ENST00000557740 DYRK2Q92630 601 aa12.06□□□□□ -0.48
SHMT2-235ENST00000557740 RNF170Q96K19 258 aa12.06□□□□□ -0.48
SHMT2-235ENST00000557740 DMRTB1Q96MA1 342 aa12.06□□□□□ -0.48
SHMT2-235ENST00000557740 RAB3IPQ96QF0 476 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-235ENST00000557740 HIST1H2AAQ96QV6 131 aa12.06□□□□□ -0.48
SHMT2-235ENST00000557740 DNTTIP1Q9H147 329 aa12.06□□□□□ -0.48
SHMT2-235ENST00000557740 WDR13Q9H1Z4 485 aa12.06□□□□□ -0.48
SHMT2-235ENST00000557740 DPAGT1Q9H3H5 408 aa12.06□□□□□ -0.48
SHMT2-235ENST00000557740 YY1AP1Q9H869 796 aa12.06□□□□□ -0.48
SHMT2-235ENST00000557740 SIRT7Q9NRC8 400 aa12.06□□□□□ -0.48
SHMT2-235ENST00000557740 SNTG1Q9NSN8 517 aa12.06□□□□□ -0.48
SHMT2-235ENST00000557740 LRP12Q9Y561 859 aa12.06□□□□□ -0.48
SHMT2-235ENST00000557740 CLPSL1A2RUU4 121 aa12.05□□□□□ -0.48
SHMT2-235ENST00000557740 BTBD17A6NE02 478 aa12.05□□□□□ -0.48
SHMT2-235ENST00000557740 AKR7A2O43488 359 aa12.05□□□□□ -0.48
SHMT2-235ENST00000557740 GPR137BO60478 399 aa12.05□□□□□ -0.48
SHMT2-235ENST00000557740 FBP1P09467 338 aa12.05□□□□□ -0.48
SHMT2-235ENST00000557740 EEF1B2P24534 225 aaKnown RBP12.05□□□□□ -0.48
SHMT2-235ENST00000557740 GPM6AP51674 278 aa12.05□□□□□ -0.48
SHMT2-235ENST00000557740 RELBQ01201 579 aa12.05□□□□□ -0.48
SHMT2-235ENST00000557740 GUCA2AQ02747 115 aa12.05□□□□□ -0.48
SHMT2-235ENST00000557740 ATPAF1Q5TC12 328 aaPredicted RBP12.05□□□□□ -0.48
SHMT2-235ENST00000557740 SPATA24Q86W54 205 aa12.05□□□□□ -0.48
SHMT2-235ENST00000557740 HS3ST5Q8IZT8 346 aa12.05□□□□□ -0.48
SHMT2-235ENST00000557740 LY6G5BQ8NDX9 201 aa12.05□□□□□ -0.48
SHMT2-235ENST00000557740 HPSE2Q8WWQ2 592 aa12.05□□□□□ -0.48
SHMT2-235ENST00000557740 LRTOMTQ8WZ04 291 aa12.05□□□□□ -0.48
SHMT2-235ENST00000557740 MED30Q96HR3 178 aa12.05□□□□□ -0.48
SHMT2-235ENST00000557740 LYZL4Q96KX0 146 aa12.05□□□□□ -0.48
SHMT2-235ENST00000557740 DCTN5Q9BTE1 182 aa12.05□□□□□ -0.48
SHMT2-235ENST00000557740 ZNF816-ZNF321PA0A0X1KG74 233 aa12.04□□□□□ -0.48
SHMT2-235ENST00000557740 SELLP14151 372 aa12.04□□□□□ -0.48
SHMT2-235ENST00000557740 ALOX5APP20292 161 aa12.04□□□□□ -0.48
SHMT2-235ENST00000557740 PRKACGP22612 351 aa12.04□□□□□ -0.48
SHMT2-235ENST00000557740 IER3P46695 156 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms