RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 GP2P55259 537 aaKnown RBP12.96□□□□□ -0.33
NEDD1-213ENST00000557644 RPS25P62851 125 aaKnown RBP12.96□□□□□ -0.33
NEDD1-213ENST00000557644 KRT74Q7RTS7 529 aa12.96□□□□□ -0.33
NEDD1-213ENST00000557644 TGIF2LYQ8IUE0 185 aa12.96□□□□□ -0.33
NEDD1-213ENST00000557644 OR8S1Q8NH09 359 aa12.96□□□□□ -0.33
NEDD1-213ENST00000557644 ITLN1Q8WWA0 313 aa12.96□□□□□ -0.33
NEDD1-213ENST00000557644 TMEM106AQ96A25 262 aa12.96□□□□□ -0.33
NEDD1-213ENST00000557644 DECR2Q9NUI1 292 aa12.96□□□□□ -0.33
NEDD1-213ENST00000557644 TRBV5-5A0A0J9YX44 114 aa12.95□□□□□ -0.34
NEDD1-213ENST00000557644 TRIM64CA6NLI5 447 aa12.95□□□□□ -0.34
NEDD1-213ENST00000557644 LYNX1G3V0Z9 82 aa12.95□□□□□ -0.34
NEDD1-213ENST00000557644 LYNX1P0DP58 116 aa12.95□□□□□ -0.34
NEDD1-213ENST00000557644 ZNF20P17024 532 aa12.95□□□□□ -0.34
NEDD1-213ENST00000557644 GPR50Q13585 617 aa12.95□□□□□ -0.34
NEDD1-213ENST00000557644 UBE2V2Q15819 145 aa12.95□□□□□ -0.34
NEDD1-213ENST00000557644 FAM209AQ5JX71 171 aa12.95□□□□□ -0.34
NEDD1-213ENST00000557644 CLVS2Q5SYC1 327 aa12.95□□□□□ -0.34
NEDD1-213ENST00000557644 ZBTB37Q5TC79 503 aa12.95□□□□□ -0.34
NEDD1-213ENST00000557644 ASPHD2Q6ICH7 369 aa12.95□□□□□ -0.34
NEDD1-213ENST00000557644 MOB3CQ70IA8 216 aa12.95□□□□□ -0.34
NEDD1-213ENST00000557644 ZDHHC23Q8IYP9 409 aa12.95□□□□□ -0.34
NEDD1-213ENST00000557644 CCDC54Q8NEL0 328 aa12.95□□□□□ -0.34
NEDD1-213ENST00000557644 NINJ1Q92982 152 aa12.95□□□□□ -0.34
NEDD1-213ENST00000557644 TRMT61AQ96FX7 289 aaKnown RBP12.95□□□□□ -0.34
NEDD1-213ENST00000557644 GSX2Q9BZM3 304 aa12.95□□□□□ -0.34
NEDD1-213ENST00000557644 SLC22A4Q9H015 551 aa12.95□□□□□ -0.34
NEDD1-213ENST00000557644 SAP30LQ9HAJ7 183 aa12.95□□□□□ -0.34
NEDD1-213ENST00000557644 SF3B6Q9Y3B4 125 aaKnown RBP12.95□□□□□ -0.34
NEDD1-213ENST00000557644 MPC1Q9Y5U8 109 aa12.95□□□□□ -0.34
NEDD1-213ENST00000557644 CDC14BO60729 498 aa12.95□□□□□ -0.34
NEDD1-213ENST00000557644 THBS2P35442 1172 aa12.95□□□□□ -0.34
NEDD1-213ENST00000557644 PCGF3Q3KNV8 242 aa12.95□□□□□ -0.34
NEDD1-213ENST00000557644 SYT6Q5T7P8 510 aaPredicted RBP12.95□□□□□ -0.34
NEDD1-213ENST00000557644 PLCXD3Q63HM9 321 aa12.95□□□□□ -0.34
NEDD1-213ENST00000557644 WDR86Q86TI4 376 aa12.95□□□□□ -0.34
NEDD1-213ENST00000557644 NPRL2Q8WTW4 380 aa12.95□□□□□ -0.34
NEDD1-213ENST00000557644 OR5P3Q8WZ94 311 aa12.95□□□□□ -0.34
NEDD1-213ENST00000557644 MUL1Q969V5 352 aa12.95□□□□□ -0.34
NEDD1-213ENST00000557644 MEGF10Q96KG7 1140 aa12.95□□□□□ -0.34
NEDD1-213ENST00000557644 DIRC2Q96SL1 478 aa12.95□□□□□ -0.34
NEDD1-213ENST00000557644 CHST5Q9GZS9 411 aa12.95□□□□□ -0.34
NEDD1-213ENST00000557644 BEX4Q9NWD9 120 aaPredicted RBP12.95□□□□□ -0.34
NEDD1-213ENST00000557644 NKIRAS2Q9NYR9 191 aa12.95□□□□□ -0.34
NEDD1-213ENST00000557644 CACNG2Q9Y698 323 aa12.95□□□□□ -0.34
NEDD1-213ENST00000557644 ANXA2P2A6NMY6 339 aa12.94□□□□□ -0.34
NEDD1-213ENST00000557644 F12P00748 615 aaPredicted RBP12.94□□□□□ -0.34
NEDD1-213ENST00000557644 ERCC1P07992 297 aaPredicted RBP12.94□□□□□ -0.34
NEDD1-213ENST00000557644 CD55P08174 381 aa12.94□□□□□ -0.34
NEDD1-213ENST00000557644 PAX1P15863 534 aa12.94□□□□□ -0.34
NEDD1-213ENST00000557644 TNFSF4P23510 183 aa12.94□□□□□ -0.34
NEDD1-213ENST00000557644 EFNA4P52798 201 aa12.94□□□□□ -0.34
NEDD1-213ENST00000557644 MPPED2Q15777 294 aa12.94□□□□□ -0.34
NEDD1-213ENST00000557644 Q499Y3 187 aa12.94□□□□□ -0.34
NEDD1-213ENST00000557644 PRAMEF6Q5VXH4 476 aa12.94□□□□□ -0.34
NEDD1-213ENST00000557644 MBD6Q96DN6 1003 aa12.94□□□□□ -0.34
NEDD1-213ENST00000557644 IL19Q9UHD0 177 aa12.94□□□□□ -0.34
NEDD1-213ENST00000557644 IGKV1-9A0A0C4DH69 117 aa12.94□□□□□ -0.34
NEDD1-213ENST00000557644 SSX4O60224 188 aa12.94□□□□□ -0.34
NEDD1-213ENST00000557644 GPM6AP51674 278 aa12.94□□□□□ -0.34
NEDD1-213ENST00000557644 ACSM3Q53FZ2 586 aa12.94□□□□□ -0.34
NEDD1-213ENST00000557644 FAM27D1Q5T7N8 215 aa12.94□□□□□ -0.34
NEDD1-213ENST00000557644 MS4A15Q8N5U1 240 aa12.94□□□□□ -0.34
NEDD1-213ENST00000557644 PARP16Q8N5Y8 322 aa12.94□□□□□ -0.34
NEDD1-213ENST00000557644 OR13C9Q8NGT0 318 aa12.94□□□□□ -0.34
NEDD1-213ENST00000557644 TRMT10AQ8TBZ6 339 aaKnown RBP12.94□□□□□ -0.34
NEDD1-213ENST00000557644 NEU4Q8WWR8 484 aaPredicted RBP12.94□□□□□ -0.34
NEDD1-213ENST00000557644 ITFG2Q969R8 447 aa12.94□□□□□ -0.34
NEDD1-213ENST00000557644 C10orf35Q96D05 121 aa12.94□□□□□ -0.34
NEDD1-213ENST00000557644 RNF170Q96K19 258 aa12.94□□□□□ -0.34
NEDD1-213ENST00000557644 NDUFB11Q9NX14 153 aa12.94□□□□□ -0.34
NEDD1-213ENST00000557644 TEX15Q9BXT5 2789 aa12.94□□□□□ -0.34
NEDD1-213ENST00000557644 MAGEA13PA6NCF6 341 aa12.93□□□□□ -0.34
NEDD1-213ENST00000557644 ZNF879B4DU55 563 aa12.93□□□□□ -0.34
NEDD1-213ENST00000557644 GRPP07492 148 aa12.93□□□□□ -0.34
NEDD1-213ENST00000557644 COL8A2P25067 703 aa12.93□□□□□ -0.34
NEDD1-213ENST00000557644 CEACAM21Q3KPI0 293 aa12.93□□□□□ -0.34
NEDD1-213ENST00000557644 SERPINA12Q8IW75 414 aa12.93□□□□□ -0.34
NEDD1-213ENST00000557644 ZNF525Q8N782 197 aa12.93□□□□□ -0.34
NEDD1-213ENST00000557644 PP6455Q8WZ26 134 aa12.93□□□□□ -0.34
NEDD1-213ENST00000557644 EGLN1Q9GZT9 426 aa12.93□□□□□ -0.34
NEDD1-213ENST00000557644 CXXC4Q9H2H0 198 aa12.93□□□□□ -0.34
NEDD1-213ENST00000557644 PPIL3Q9H2H8 161 aaKnown RBP12.93□□□□□ -0.34
NEDD1-213ENST00000557644 UFSP2Q9NUQ7 469 aa12.93□□□□□ -0.34
NEDD1-213ENST00000557644 TAS2R4Q9NYW5 299 aa12.93□□□□□ -0.34
NEDD1-213ENST00000557644 CCRL2O00421 344 aa12.93□□□□□ -0.34
NEDD1-213ENST00000557644 PIN1P1O15428 100 aa12.93□□□□□ -0.34
NEDD1-213ENST00000557644 DAOP14920 347 aa12.93□□□□□ -0.34
NEDD1-213ENST00000557644 GABRA5P31644 462 aa12.93□□□□□ -0.34
NEDD1-213ENST00000557644 CD200P41217 278 aa12.93□□□□□ -0.34
NEDD1-213ENST00000557644 FABP5Q01469 135 aa12.93□□□□□ -0.34
NEDD1-213ENST00000557644 TMEM91Q6ZNR0 172 aa12.93□□□□□ -0.34
NEDD1-213ENST00000557644 OR51A2Q8NGJ7 313 aa12.93□□□□□ -0.34
NEDD1-213ENST00000557644 ZNF420Q8TAQ5 688 aaPredicted RBP12.93□□□□□ -0.34
NEDD1-213ENST00000557644 YIPF5Q969M3 257 aa12.93□□□□□ -0.34
NEDD1-213ENST00000557644 DERL3Q96Q80 235 aa12.93□□□□□ -0.34
NEDD1-213ENST00000557644 HIST1H2AAQ96QV6 131 aa12.93□□□□□ -0.34
NEDD1-213ENST00000557644 GCM1Q9NP62 436 aa12.93□□□□□ -0.34
NEDD1-213ENST00000557644 NOX4Q9NPH5 578 aa12.93□□□□□ -0.34
NEDD1-213ENST00000557644 DCAF16Q9NXF7 216 aa12.93□□□□□ -0.34
NEDD1-213ENST00000557644 NOP16Q9Y3C1 178 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms