RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 CDK5Q00535 292 aa11.7□□□□□ -0.54
SNX6-210ENST00000557341 PRDX4Q13162 271 aa11.7□□□□□ -0.54
SNX6-210ENST00000557341 CDONQ4KMG0 1287 aa11.7□□□□□ -0.54
SNX6-210ENST00000557341 STUMQ69YW2 141 aa11.7□□□□□ -0.54
SNX6-210ENST00000557341 DUX4L9Q6RFH8 374 aaPredicted RBP11.7□□□□□ -0.54
SNX6-210ENST00000557341 FAM216BQ8N7L0 139 aa11.7□□□□□ -0.54
SNX6-210ENST00000557341 SCCPDHQ8NBX0 429 aa11.7□□□□□ -0.54
SNX6-210ENST00000557341 OR10Z1Q8NGY1 313 aa11.7□□□□□ -0.54
SNX6-210ENST00000557341 CCL13Q99616 98 aa11.7□□□□□ -0.54
SNX6-210ENST00000557341 PKP2Q99959 881 aa11.7□□□□□ -0.54
SNX6-210ENST00000557341 TEX12Q9BXU0 123 aa11.7□□□□□ -0.54
SNX6-210ENST00000557341 CHIAQ9BZP6 476 aa11.7□□□□□ -0.54
SNX6-210ENST00000557341 NIPAL2Q9H841 368 aa11.7□□□□□ -0.54
SNX6-210ENST00000557341 YY1AP1Q9H869 796 aa11.7□□□□□ -0.54
SNX6-210ENST00000557341 DNAJB11Q9UBS4 358 aa11.7□□□□□ -0.54
SNX6-210ENST00000557341 DUX4Q9UBX2 424 aa11.7□□□□□ -0.54
SNX6-210ENST00000557341 LRP12Q9Y561 859 aa11.7□□□□□ -0.54
SNX6-210ENST00000557341 NKX6-3A6NJ46 265 aa11.69□□□□□ -0.54
SNX6-210ENST00000557341 GPR37O15354 613 aa11.69□□□□□ -0.54
SNX6-210ENST00000557341 NDUFB3O43676 98 aa11.69□□□□□ -0.54
SNX6-210ENST00000557341 CST4P01036 141 aa11.69□□□□□ -0.54
SNX6-210ENST00000557341 KNG1P01042 644 aa11.69□□□□□ -0.54
SNX6-210ENST00000557341 ANXA8P13928 327 aa11.69□□□□□ -0.54
SNX6-210ENST00000557341 ELF3P78545 371 aaPredicted RBP11.69□□□□□ -0.54
SNX6-210ENST00000557341 IKZF1Q13422 519 aa11.69□□□□□ -0.54
SNX6-210ENST00000557341 FLOT2Q14254 428 aa11.69□□□□□ -0.54
SNX6-210ENST00000557341 DNAL1Q4LDG9 190 aa11.69□□□□□ -0.54
SNX6-210ENST00000557341 LRRC10Q5BKY1 277 aa11.69□□□□□ -0.54
SNX6-210ENST00000557341 KCTD8Q6ZWB6 473 aa11.69□□□□□ -0.54
SNX6-210ENST00000557341 VMO1Q7Z5L0 202 aa11.69□□□□□ -0.54
SNX6-210ENST00000557341 KRT77Q7Z794 578 aa11.69□□□□□ -0.54
SNX6-210ENST00000557341 LDLRAD3Q86YD5 345 aa11.69□□□□□ -0.54
SNX6-210ENST00000557341 CPOQ8IVL8 374 aa11.69□□□□□ -0.54
SNX6-210ENST00000557341 ZDHHC23Q8IYP9 409 aa11.69□□□□□ -0.54
SNX6-210ENST00000557341 CMTM4Q8IZR5 234 aa11.69□□□□□ -0.54
SNX6-210ENST00000557341 HS3ST5Q8IZT8 346 aa11.69□□□□□ -0.54
SNX6-210ENST00000557341 FGFRL1Q8N441 504 aa11.69□□□□□ -0.54
SNX6-210ENST00000557341 KIR3DL3Q8N743 410 aa11.69□□□□□ -0.54
SNX6-210ENST00000557341 BBS1Q8NFJ9 593 aa11.69□□□□□ -0.54
SNX6-210ENST00000557341 OR8B12Q8NGG6 310 aa11.69□□□□□ -0.54
SNX6-210ENST00000557341 FAM81AQ8TBF8 368 aa11.69□□□□□ -0.54
SNX6-210ENST00000557341 TBC1D15Q8TC07 691 aa11.69□□□□□ -0.54
SNX6-210ENST00000557341 WFDC12Q8WWY7 111 aa11.69□□□□□ -0.54
SNX6-210ENST00000557341 OR5P3Q8WZ94 311 aa11.69□□□□□ -0.54
SNX6-210ENST00000557341 DMRTB1Q96MA1 342 aa11.69□□□□□ -0.54
SNX6-210ENST00000557341 DNTTIP1Q9H147 329 aa11.69□□□□□ -0.54
SNX6-210ENST00000557341 CNTD2Q9H8S5 307 aa11.69□□□□□ -0.54
SNX6-210ENST00000557341 BEX1Q9HBH7 125 aa11.69□□□□□ -0.54
SNX6-210ENST00000557341 SLC25A19Q9HC21 320 aa11.69□□□□□ -0.54
SNX6-210ENST00000557341 ONECUT1Q9UBC0 465 aa11.69□□□□□ -0.54
SNX6-210ENST00000557341 LAMP5Q9UJQ1 280 aa11.69□□□□□ -0.54
SNX6-210ENST00000557341 KLHDC2Q9Y2U9 406 aa11.69□□□□□ -0.54
SNX6-210ENST00000557341 DSCAML1Q8TD84 2053 aa11.68□□□□□ -0.54
SNX6-210ENST00000557341 VWFP04275 2813 aa11.68□□□□□ -0.54
SNX6-210ENST00000557341 ZNF850A8MQ14 1090 aa11.68□□□□□ -0.54
SNX6-210ENST00000557341 WIPF1O43516 503 aa11.68□□□□□ -0.54
SNX6-210ENST00000557341 NDUFA7O95182 113 aa11.68□□□□□ -0.54
SNX6-210ENST00000557341 SLC2A5P22732 501 aa11.68□□□□□ -0.54
SNX6-210ENST00000557341 GMFBP60983 142 aa11.68□□□□□ -0.54
SNX6-210ENST00000557341 CBX1P83916 185 aa11.68□□□□□ -0.54
SNX6-210ENST00000557341 C17orf107Q6ZR85 190 aa11.68□□□□□ -0.54
SNX6-210ENST00000557341 SPATA24Q86W54 205 aa11.68□□□□□ -0.54
SNX6-210ENST00000557341 LY6G5BQ8NDX9 201 aa11.68□□□□□ -0.54
SNX6-210ENST00000557341 HPSE2Q8WWQ2 592 aa11.68□□□□□ -0.54
SNX6-210ENST00000557341 DNAJC9Q8WXX5 260 aa11.68□□□□□ -0.54
SNX6-210ENST00000557341 PIGCQ92535 297 aa11.68□□□□□ -0.54
SNX6-210ENST00000557341 DYRK2Q92630 601 aa11.68□□□□□ -0.54
SNX6-210ENST00000557341 RPL3LQ92901 407 aaKnown RBP11.68□□□□□ -0.54
SNX6-210ENST00000557341 SEH1LQ96EE3 360 aa11.68□□□□□ -0.54
SNX6-210ENST00000557341 LYZL4Q96KX0 146 aa11.68□□□□□ -0.54
SNX6-210ENST00000557341 HAO2Q9NYQ3 351 aa11.68□□□□□ -0.54
SNX6-210ENST00000557341 C1RLQ9NZP8 487 aa11.68□□□□□ -0.54
SNX6-210ENST00000557341 DNAJB9Q9UBS3 223 aa11.68□□□□□ -0.54
SNX6-210ENST00000557341 A0A0U1RQK1 487 aa11.67□□□□□ -0.54
SNX6-210ENST00000557341 ZNF816-ZNF321PA0A0X1KG74 233 aa11.67□□□□□ -0.54
SNX6-210ENST00000557341 GYG2O15488 501 aa11.67□□□□□ -0.54
SNX6-210ENST00000557341 FKBP6O75344 327 aa11.67□□□□□ -0.54
SNX6-210ENST00000557341 ALOX5APP20292 161 aa11.67□□□□□ -0.54
SNX6-210ENST00000557341 PRKACGP22612 351 aa11.67□□□□□ -0.54
SNX6-210ENST00000557341 RELBQ01201 579 aa11.67□□□□□ -0.54
SNX6-210ENST00000557341 APOFQ13790 326 aa11.67□□□□□ -0.54
SNX6-210ENST00000557341 ATPAF1Q5TC12 328 aaPredicted RBP11.67□□□□□ -0.54
SNX6-210ENST00000557341 LCN1P1Q5VSP4 162 aa11.67□□□□□ -0.54
SNX6-210ENST00000557341 OLFML2AQ68BL7 652 aa11.67□□□□□ -0.54
SNX6-210ENST00000557341 KCTD18Q6PI47 426 aaPredicted RBP11.67□□□□□ -0.54
SNX6-210ENST00000557341 METAP1DQ6UB28 335 aaPredicted RBP11.67□□□□□ -0.54
SNX6-210ENST00000557341 TREML4Q6UXN2 200 aa11.67□□□□□ -0.54
SNX6-210ENST00000557341 TRPM8Q7Z2W7 1104 aa11.67□□□□□ -0.54
SNX6-210ENST00000557341 COMMD2Q86X83 199 aa11.67□□□□□ -0.54
SNX6-210ENST00000557341 PDZD9Q8IXQ8 264 aa11.67□□□□□ -0.54
SNX6-210ENST00000557341 PAPD5Q8NDF8 572 aaKnown RBP11.67□□□□□ -0.54
SNX6-210ENST00000557341 OR5T2Q8NGG2 359 aa11.67□□□□□ -0.54
SNX6-210ENST00000557341 C8orf46Q8TAG6 207 aa11.67□□□□□ -0.54
SNX6-210ENST00000557341 H1FXQ92522 213 aaKnown RBP11.67□□□□□ -0.54
SNX6-210ENST00000557341 RNF170Q96K19 258 aa11.67□□□□□ -0.54
SNX6-210ENST00000557341 RAB3IPQ96QF0 476 aaPredicted RBP11.67□□□□□ -0.54
SNX6-210ENST00000557341 HIST1H2AAQ96QV6 131 aa11.67□□□□□ -0.54
SNX6-210ENST00000557341 DCTN5Q9BTE1 182 aa11.67□□□□□ -0.54
SNX6-210ENST00000557341 YIPF3Q9GZM5 350 aa11.67□□□□□ -0.54
SNX6-210ENST00000557341 WDR13Q9H1Z4 485 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms