RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 GMDSO60547 372 aa20.38■□□□□ 0.85
SIX4-203ENST00000556952 CST4P01036 141 aa20.38■□□□□ 0.85
SIX4-203ENST00000556952 NRASP01111 189 aa20.38■□□□□ 0.85
SIX4-203ENST00000556952 HCKP08631 526 aa20.38■□□□□ 0.85
SIX4-203ENST00000556952 CALCBP10092 127 aa20.38■□□□□ 0.85
SIX4-203ENST00000556952 PRF1P14222 555 aa20.38■□□□□ 0.85
SIX4-203ENST00000556952 SELEP16581 610 aa20.38■□□□□ 0.85
SIX4-203ENST00000556952 FAM166AQ6J272 317 aa20.38■□□□□ 0.85
SIX4-203ENST00000556952 JAGN1Q8N5M9 183 aa20.38■□□□□ 0.85
SIX4-203ENST00000556952 ZNF671Q8TAW3 534 aa20.38■□□□□ 0.85
SIX4-203ENST00000556952 TRMT10AQ8TBZ6 339 aaKnown RBP20.38■□□□□ 0.85
SIX4-203ENST00000556952 MARS2Q96GW9 593 aaKnown RBP20.38■□□□□ 0.85
SIX4-203ENST00000556952 ZC3HAV1LQ96H79 300 aaKnown RBP20.38■□□□□ 0.85
SIX4-203ENST00000556952 WFIKKN1Q96NZ8 548 aa20.38■□□□□ 0.85
SIX4-203ENST00000556952 LIN7BQ9HAP6 207 aa20.38■□□□□ 0.85
SIX4-203ENST00000556952 AZGP1P25311 298 aaKnown RBP20.38■□□□□ 0.85
SIX4-203ENST00000556952 RAB11BQ15907 218 aa20.38■□□□□ 0.85
SIX4-203ENST00000556952 C1orf100Q5SVJ3 147 aa20.38■□□□□ 0.85
SIX4-203ENST00000556952 LAX1Q8IWV1 398 aa20.38■□□□□ 0.85
SIX4-203ENST00000556952 CPNE2Q96FN4 548 aaPredicted RBP20.38■□□□□ 0.85
SIX4-203ENST00000556952 CEP19Q96LK0 163 aa20.38■□□□□ 0.85
SIX4-203ENST00000556952 ABCB9Q9NP78 766 aa20.38■□□□□ 0.85
SIX4-203ENST00000556952 GPR173Q9NS66 373 aa20.38■□□□□ 0.85
SIX4-203ENST00000556952 ADAM30Q9UKF2 790 aa20.38■□□□□ 0.85
SIX4-203ENST00000556952 SPATA2Q9UM82 520 aa20.38■□□□□ 0.85
SIX4-203ENST00000556952 PRKACBP22694 351 aa20.37■□□□□ 0.85
SIX4-203ENST00000556952 HTR2CP28335 458 aa20.37■□□□□ 0.85
SIX4-203ENST00000556952 ZNF93P35789 620 aaPredicted RBP20.37■□□□□ 0.85
SIX4-203ENST00000556952 CAPZA1P52907 286 aa20.37■□□□□ 0.85
SIX4-203ENST00000556952 ERVS71-1P61550 626 aa20.37■□□□□ 0.85
SIX4-203ENST00000556952 KLF14Q8TD94 323 aaPredicted RBP20.37■□□□□ 0.85
SIX4-203ENST00000556952 PIGCQ92535 297 aa20.37■□□□□ 0.85
SIX4-203ENST00000556952 CMBLQ96DG6 245 aa20.37■□□□□ 0.85
SIX4-203ENST00000556952 HMG20AQ9NP66 347 aa20.37■□□□□ 0.85
SIX4-203ENST00000556952 CGGBP1Q9UFW8 167 aaPredicted RBP20.37■□□□□ 0.85
SIX4-203ENST00000556952 RHBDD3Q9Y3P4 386 aa20.37■□□□□ 0.85
SIX4-203ENST00000556952 PKDREJQ9NTG1 2253 aa20.37■□□□□ 0.85
SIX4-203ENST00000556952 CELSR2Q9HCU4 2923 aa20.36■□□□□ 0.85
SIX4-203ENST00000556952 INHBBP09529 407 aa20.36■□□□□ 0.85
SIX4-203ENST00000556952 SNRPBP14678 240 aaKnown RBP20.36■□□□□ 0.85
SIX4-203ENST00000556952 RPS23P62266 143 aaKnown RBP20.36■□□□□ 0.85
SIX4-203ENST00000556952 SNTB2Q13425 540 aaKnown RBP20.36■□□□□ 0.85
SIX4-203ENST00000556952 RIN1Q13671 783 aa20.36■□□□□ 0.85
SIX4-203ENST00000556952 ZNF718Q3SXZ3 478 aa20.36■□□□□ 0.85
SIX4-203ENST00000556952 MBNL2Q5VZF2 373 aaKnown RBP20.36■□□□□ 0.85
SIX4-203ENST00000556952 HAVCR1Q96D42 359 aa20.36■□□□□ 0.85
SIX4-203ENST00000556952 PAPOLGQ9BWT3 736 aaKnown RBP20.36■□□□□ 0.85
SIX4-203ENST00000556952 MIXL1Q9H2W2 232 aa20.36■□□□□ 0.85
SIX4-203ENST00000556952 AKIP1Q9NQ31 210 aa20.36■□□□□ 0.85
SIX4-203ENST00000556952 MRPL15Q9P015 296 aaKnown RBP20.36■□□□□ 0.85
SIX4-203ENST00000556952 ETV7Q9Y603 341 aa20.36■□□□□ 0.85
SIX4-203ENST00000556952 ANKRD30BLA7E2S9 258 aa20.35■□□□□ 0.85
SIX4-203ENST00000556952 PAHP00439 452 aa20.35■□□□□ 0.85
SIX4-203ENST00000556952 ETV6P41212 452 aa20.35■□□□□ 0.85
SIX4-203ENST00000556952 NKX6-1P78426 367 aaPredicted RBP20.35■□□□□ 0.85
SIX4-203ENST00000556952 PLCXD3Q63HM9 321 aa20.35■□□□□ 0.85
SIX4-203ENST00000556952 SP5Q6BEB4 398 aaPredicted RBP20.35■□□□□ 0.85
SIX4-203ENST00000556952 OR2T2Q6IF00 324 aa20.35■□□□□ 0.85
SIX4-203ENST00000556952 LGALS14Q8TCE9 139 aa20.35■□□□□ 0.85
SIX4-203ENST00000556952 CMTM3Q96MX0 182 aa20.35■□□□□ 0.85
SIX4-203ENST00000556952 SLC7A11Q9UPY5 501 aa20.35■□□□□ 0.85
SIX4-203ENST00000556952 IQCF6A8MYZ5 107 aa20.34■□□□□ 0.85
SIX4-203ENST00000556952 CLDN25C9JDP6 229 aa20.34■□□□□ 0.85
SIX4-203ENST00000556952 HPGDSO60760 199 aa20.34■□□□□ 0.85
SIX4-203ENST00000556952 TNFSF8P32971 234 aa20.34■□□□□ 0.85
SIX4-203ENST00000556952 GLRXP35754 106 aa20.34■□□□□ 0.85
SIX4-203ENST00000556952 CLDN12P56749 244 aa20.34■□□□□ 0.85
SIX4-203ENST00000556952 KISS1Q15726 138 aa20.34■□□□□ 0.85
SIX4-203ENST00000556952 RGS7BPQ6MZT1 257 aaPredicted RBP20.34■□□□□ 0.85
SIX4-203ENST00000556952 LHFPL2Q6ZUX7 228 aa20.34■□□□□ 0.85
SIX4-203ENST00000556952 CCDC190Q86UF4 302 aa20.34■□□□□ 0.85
SIX4-203ENST00000556952 LRRC28Q86X40 367 aaPredicted RBP20.34■□□□□ 0.85
SIX4-203ENST00000556952 ZDHHC23Q8IYP9 409 aa20.34■□□□□ 0.85
SIX4-203ENST00000556952 SAMD12Q8N8I0 201 aa20.34■□□□□ 0.85
SIX4-203ENST00000556952 PNLDC1Q8NA58 520 aaKnown RBP20.34■□□□□ 0.85
SIX4-203ENST00000556952 WDR12Q9GZL7 423 aaKnown RBP20.34■□□□□ 0.85
SIX4-203ENST00000556952 CNTD2Q9H8S5 307 aa20.34■□□□□ 0.85
SIX4-203ENST00000556952 MPC1Q9Y5U8 109 aa20.34■□□□□ 0.85
SIX4-203ENST00000556952 DCHS2Q6V1P9 2916 aa20.34■□□□□ 0.85
SIX4-203ENST00000556952 A0A0B4J203 849 aa20.34■□□□□ 0.85
SIX4-203ENST00000556952 ZNF850A8MQ14 1090 aa20.34■□□□□ 0.85
SIX4-203ENST00000556952 ATP6V1G2-DDX39BF2Z307 99 aa20.34■□□□□ 0.85
SIX4-203ENST00000556952 BMP4P12644 408 aa20.34■□□□□ 0.85
SIX4-203ENST00000556952 GCH1P30793 250 aa20.34■□□□□ 0.85
SIX4-203ENST00000556952 FUT6P51993 359 aa20.34■□□□□ 0.85
SIX4-203ENST00000556952 PSG7Q13046 419 aa20.34■□□□□ 0.85
SIX4-203ENST00000556952 PRDX4Q13162 271 aa20.34■□□□□ 0.85
SIX4-203ENST00000556952 SNTB1Q13884 538 aaKnown RBP20.34■□□□□ 0.85
SIX4-203ENST00000556952 SPANXN2Q5MJ10 180 aa20.34■□□□□ 0.85
SIX4-203ENST00000556952 MOB3CQ70IA8 216 aa20.34■□□□□ 0.85
SIX4-203ENST00000556952 NUP37Q8NFH4 326 aa20.34■□□□□ 0.85
SIX4-203ENST00000556952 SLC25A28Q96A46 364 aa20.34■□□□□ 0.85
SIX4-203ENST00000556952 GPER1Q99527 375 aa20.34■□□□□ 0.85
SIX4-203ENST00000556952 ESRP2Q9H6T0 727 aaKnown RBP20.34■□□□□ 0.85
SIX4-203ENST00000556952 OR5V1Q9UGF6 321 aa20.34■□□□□ 0.85
SIX4-203ENST00000556952 DPRXA6NFQ7 191 aa20.33■□□□□ 0.84
SIX4-203ENST00000556952 IGFBP2P18065 325 aa20.33■□□□□ 0.84
SIX4-203ENST00000556952 KITLGP21583 273 aa20.33■□□□□ 0.84
SIX4-203ENST00000556952 MPV17P39210 176 aa20.33■□□□□ 0.84
SIX4-203ENST00000556952 BSPH1Q075Z2 132 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms