RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 XRCC2O43543 280 aa7.32□□□□□ -1.24
HNRNPC-227ENST00000556897 SPARCP09486 303 aa7.32□□□□□ -1.24
HNRNPC-227ENST00000556897 NCK1P16333 377 aa7.32□□□□□ -1.24
HNRNPC-227ENST00000556897 RHCEP18577 417 aa7.32□□□□□ -1.24
HNRNPC-227ENST00000556897 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.32□□□□□ -1.24
HNRNPC-227ENST00000556897 SF3A3Q12874 501 aaKnown RBP eCLIP7.32□□□□□ -1.241e-7■■■□□ 16.9
HNRNPC-227ENST00000556897 AANATQ16613 207 aa7.32□□□□□ -1.24
HNRNPC-227ENST00000556897 CCBE1Q6UXH8 406 aaPredicted RBP7.32□□□□□ -1.24
HNRNPC-227ENST00000556897 ZNF788Q6ZQV5 615 aa7.32□□□□□ -1.24
HNRNPC-227ENST00000556897 ARPINQ7Z6K5 226 aa7.32□□□□□ -1.24
HNRNPC-227ENST00000556897 ZDHHC21Q8IVQ6 265 aa7.32□□□□□ -1.24
HNRNPC-227ENST00000556897 CYB561A3Q8NBI2 242 aa7.32□□□□□ -1.24
HNRNPC-227ENST00000556897 PROKR2Q8NFJ6 384 aa7.32□□□□□ -1.24
HNRNPC-227ENST00000556897 OR51L1Q8NGJ5 315 aa7.32□□□□□ -1.24
HNRNPC-227ENST00000556897 OR5D13Q8NGL4 314 aa7.32□□□□□ -1.24
HNRNPC-227ENST00000556897 ANGPTL6Q8NI99 470 aa7.32□□□□□ -1.24
HNRNPC-227ENST00000556897 PIFOQ8TCI5 191 aa7.32□□□□□ -1.24
HNRNPC-227ENST00000556897 RPL3LQ92901 407 aaKnown RBP7.32□□□□□ -1.24
HNRNPC-227ENST00000556897 FAM162AQ96A26 154 aa7.32□□□□□ -1.24
HNRNPC-227ENST00000556897 SGK3Q96BR1 496 aa7.32□□□□□ -1.24
HNRNPC-227ENST00000556897 SLAMF6Q96DU3 332 aa7.32□□□□□ -1.24
HNRNPC-227ENST00000556897 MED30Q96HR3 178 aa7.32□□□□□ -1.24
HNRNPC-227ENST00000556897 REEP6Q96HR9 211 aa7.32□□□□□ -1.24
HNRNPC-227ENST00000556897 RAB3IPQ96QF0 476 aaPredicted RBP7.32□□□□□ -1.24
HNRNPC-227ENST00000556897 OR5M11Q96RB7 305 aa7.32□□□□□ -1.24
HNRNPC-227ENST00000556897 FUZQ9BT04 418 aa7.32□□□□□ -1.24
HNRNPC-227ENST00000556897 PAPOLGQ9BWT3 736 aaKnown RBP7.32□□□□□ -1.24
HNRNPC-227ENST00000556897 DNTTIP1Q9H147 329 aa7.32□□□□□ -1.24
HNRNPC-227ENST00000556897 MRGBPQ9NV56 204 aa7.32□□□□□ -1.24
HNRNPC-227ENST00000556897 AP3M1Q9Y2T2 418 aa7.32□□□□□ -1.24
HNRNPC-227ENST00000556897 RHBDD3Q9Y3P4 386 aa7.32□□□□□ -1.24
HNRNPC-227ENST00000556897 COMMD3-BMI1R4GMX3 469 aa7.32□□□□□ -1.24
HNRNPC-227ENST00000556897 hCG_38984A0A1B0GV85 526 aa7.31□□□□□ -1.24
HNRNPC-227ENST00000556897 ANXA2P2A6NMY6 339 aa7.31□□□□□ -1.24
HNRNPC-227ENST00000556897 SIGLEC5O15389 551 aa7.31□□□□□ -1.24
HNRNPC-227ENST00000556897 AKR7A2O43488 359 aa7.31□□□□□ -1.24
HNRNPC-227ENST00000556897 IDH3BO43837 385 aa7.31□□□□□ -1.24
HNRNPC-227ENST00000556897 ANXA2P07355 339 aaKnown RBP7.31□□□□□ -1.24
HNRNPC-227ENST00000556897 ACAA1P09110 424 aaPredicted RBP7.31□□□□□ -1.24
HNRNPC-227ENST00000556897 CD33P20138 364 aa7.31□□□□□ -1.24
HNRNPC-227ENST00000556897 GNALP38405 381 aa7.31□□□□□ -1.24
HNRNPC-227ENST00000556897 GABRA2P47869 451 aa7.31□□□□□ -1.24
HNRNPC-227ENST00000556897 CX3CR1P49238 355 aa7.31□□□□□ -1.24
HNRNPC-227ENST00000556897 GSK3AP49840 483 aa7.31□□□□□ -1.24
HNRNPC-227ENST00000556897 CAV3P56539 151 aa7.31□□□□□ -1.24
HNRNPC-227ENST00000556897 MXRA7P84157 204 aa7.31□□□□□ -1.24
HNRNPC-227ENST00000556897 TIGD6Q17RP2 521 aa7.31□□□□□ -1.24
HNRNPC-227ENST00000556897 GFOD2Q3B7J2 385 aa7.31□□□□□ -1.24
HNRNPC-227ENST00000556897 DEFB121Q5J5C9 76 aa7.31□□□□□ -1.24
HNRNPC-227ENST00000556897 LIAT1Q6ZQX7 453 aa7.31□□□□□ -1.24
HNRNPC-227ENST00000556897 MKXQ8IYA7 352 aa7.31□□□□□ -1.24
HNRNPC-227ENST00000556897 FAM185AQ8N0U4 392 aa7.31□□□□□ -1.24
HNRNPC-227ENST00000556897 Q8N2B8 174 aa7.31□□□□□ -1.24
HNRNPC-227ENST00000556897 FAM86B1Q8N7N1 296 aa7.31□□□□□ -1.24
HNRNPC-227ENST00000556897 DTX3Q8N9I9 347 aa7.31□□□□□ -1.24
HNRNPC-227ENST00000556897 ZNRF1Q8ND25 227 aa7.31□□□□□ -1.24
HNRNPC-227ENST00000556897 WFDC9Q8NEX5 89 aa7.31□□□□□ -1.24
HNRNPC-227ENST00000556897 OR2T4Q8NH00 348 aa7.31□□□□□ -1.24
HNRNPC-227ENST00000556897 WIPF2Q8TF74 440 aaPredicted RBP7.31□□□□□ -1.24
HNRNPC-227ENST00000556897 C7orf34Q96L11 122 aa7.31□□□□□ -1.24
HNRNPC-227ENST00000556897 DHRS1Q96LJ7 313 aa7.31□□□□□ -1.24
HNRNPC-227ENST00000556897 DDOQ99489 341 aa7.31□□□□□ -1.24
HNRNPC-227ENST00000556897 MICU1Q9BPX6 476 aa7.31□□□□□ -1.24
HNRNPC-227ENST00000556897 CDCA4Q9BXL8 241 aa7.31□□□□□ -1.24
HNRNPC-227ENST00000556897 DNAH9Q9NYC9 4486 aa7.31□□□□□ -1.24
HNRNPC-227ENST00000556897 A0A1W2PRX2 142 aa7.3□□□□□ -1.24
HNRNPC-227ENST00000556897 OR2AT4A6NND4 320 aa7.3□□□□□ -1.24
HNRNPC-227ENST00000556897 ZNF878C9JN71 531 aa7.3□□□□□ -1.24
HNRNPC-227ENST00000556897 ZNF593O00488 134 aaPredicted RBP7.3□□□□□ -1.24
HNRNPC-227ENST00000556897 PEX14O75381 377 aa7.3□□□□□ -1.24
HNRNPC-227ENST00000556897 COX7A1P24310 79 aa7.3□□□□□ -1.24
HNRNPC-227ENST00000556897 SLC15A1P46059 708 aa7.3□□□□□ -1.24
HNRNPC-227ENST00000556897 ENTPD1P49961 510 aa7.3□□□□□ -1.24
HNRNPC-227ENST00000556897 RAB13P51153 203 aa7.3□□□□□ -1.24
HNRNPC-227ENST00000556897 IL5RAQ01344 420 aa7.3□□□□□ -1.24
HNRNPC-227ENST00000556897 KRT72Q14CN4 511 aa7.3□□□□□ -1.24
HNRNPC-227ENST00000556897 KLHL12Q53G59 568 aa7.3□□□□□ -1.24
HNRNPC-227ENST00000556897 PLA1AQ53H76 456 aa7.3□□□□□ -1.24
HNRNPC-227ENST00000556897 KCTD8Q6ZWB6 473 aa7.3□□□□□ -1.24
HNRNPC-227ENST00000556897 FAM57BQ71RH2 274 aa7.3□□□□□ -1.24
HNRNPC-227ENST00000556897 TMEM219Q86XT9 240 aa7.3□□□□□ -1.24
HNRNPC-227ENST00000556897 PAPD5Q8NDF8 572 aaKnown RBP7.3□□□□□ -1.24
HNRNPC-227ENST00000556897 TMEM185AQ8NFB2 350 aa7.3□□□□□ -1.24
HNRNPC-227ENST00000556897 OR10Z1Q8NGY1 313 aa7.3□□□□□ -1.24
HNRNPC-227ENST00000556897 RTL8AQ9BWD3 113 aa7.3□□□□□ -1.24
HNRNPC-227ENST00000556897 C19orf12Q9NSK7 152 aa7.3□□□□□ -1.24
HNRNPC-227ENST00000556897 DNAJC27Q9NZQ0 273 aa7.3□□□□□ -1.24
HNRNPC-227ENST00000556897 ZNF319Q9P2F9 582 aa7.3□□□□□ -1.24
HNRNPC-227ENST00000556897 NLKQ9UBE8 527 aa7.3□□□□□ -1.24
HNRNPC-227ENST00000556897 IGKV1D-17A0A075B6S4 117 aa7.29□□□□□ -1.24
HNRNPC-227ENST00000556897 TRBV23-1A0A0A0MS06 115 aa7.29□□□□□ -1.24
HNRNPC-227ENST00000556897 WI2-2373I1.2A0A1W2PRP0 233 aa7.29□□□□□ -1.24
HNRNPC-227ENST00000556897 DHRS12A0PJE2 317 aa7.29□□□□□ -1.24
HNRNPC-227ENST00000556897 ZNF850A8MQ14 1090 aa7.29□□□□□ -1.24
HNRNPC-227ENST00000556897 RHBDL1O75783 438 aa7.29□□□□□ -1.24
HNRNPC-227ENST00000556897 GADD45GO95257 159 aa7.29□□□□□ -1.24
HNRNPC-227ENST00000556897 GYPBP06028 91 aa7.29□□□□□ -1.24
HNRNPC-227ENST00000556897 GLRA1P23415 457 aa7.29□□□□□ -1.24
HNRNPC-227ENST00000556897 CFL1P23528 166 aaKnown RBP7.29□□□□□ -1.24
HNRNPC-227ENST00000556897 CALRP27797 417 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms