RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 FOXJ3Q9UPW0 622 aa10.62□□□□□ -0.71
SHMT2-221ENST00000555773 SLC7A11Q9UPY5 501 aa10.62□□□□□ -0.71
SHMT2-221ENST00000555773 GSTK1Q9Y2Q3 226 aa10.62□□□□□ -0.71
SHMT2-221ENST00000555773 A6NIN4 97 aa10.61□□□□□ -0.71
SHMT2-221ENST00000555773 ZSCAN5BA6NJL1 495 aa10.61□□□□□ -0.71
SHMT2-221ENST00000555773 H7C417 338 aa10.61□□□□□ -0.71
SHMT2-221ENST00000555773 OVOL3O00110 214 aa10.61□□□□□ -0.71
SHMT2-221ENST00000555773 PIN1P1O15428 100 aa10.61□□□□□ -0.71
SHMT2-221ENST00000555773 SPRY3O43610 288 aa10.61□□□□□ -0.71
SHMT2-221ENST00000555773 IGHV1-46P01743 117 aa10.61□□□□□ -0.71
SHMT2-221ENST00000555773 NAT2P11245 290 aa10.61□□□□□ -0.71
SHMT2-221ENST00000555773 IGFBP3P17936 291 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-221ENST00000555773 ATF1P18846 271 aa10.61□□□□□ -0.71
SHMT2-221ENST00000555773 SRMP19623 302 aa10.61□□□□□ -0.71
SHMT2-221ENST00000555773 FSTP19883 344 aa10.61□□□□□ -0.71
SHMT2-221ENST00000555773 RAB3AP20336 220 aa10.61□□□□□ -0.71
SHMT2-221ENST00000555773 FUT6P51993 359 aa10.61□□□□□ -0.71
SHMT2-221ENST00000555773 UBE2V2Q15819 145 aa10.61□□□□□ -0.71
SHMT2-221ENST00000555773 HSD17B12Q53GQ0 312 aa10.61□□□□□ -0.71
SHMT2-221ENST00000555773 ZNF529Q6P280 563 aa10.61□□□□□ -0.71
SHMT2-221ENST00000555773 DNAAF1Q8NEP3 725 aa10.61□□□□□ -0.71
SHMT2-221ENST00000555773 OR2Z1Q8NG97 314 aa10.61□□□□□ -0.71
SHMT2-221ENST00000555773 OR8S1Q8NH09 359 aa10.61□□□□□ -0.71
SHMT2-221ENST00000555773 UBASH3BQ8TF42 649 aa10.61□□□□□ -0.71
SHMT2-221ENST00000555773 IGFBPL1Q8WX77 278 aa10.61□□□□□ -0.71
SHMT2-221ENST00000555773 OR5P3Q8WZ94 311 aa10.61□□□□□ -0.71
SHMT2-221ENST00000555773 SPSB1Q96BD6 273 aa10.61□□□□□ -0.71
SHMT2-221ENST00000555773 ITPKCQ96DU7 683 aa10.61□□□□□ -0.71
SHMT2-221ENST00000555773 ELMOD3Q96FG2 381 aa10.61□□□□□ -0.71
SHMT2-221ENST00000555773 FUNDC2Q9BWH2 189 aa10.61□□□□□ -0.71
SHMT2-221ENST00000555773 RAB1BQ9H0U4 201 aa10.61□□□□□ -0.71
SHMT2-221ENST00000555773 SLITRK2Q9H156 845 aa10.61□□□□□ -0.71
SHMT2-221ENST00000555773 CXXC4Q9H2H0 198 aa10.61□□□□□ -0.71
SHMT2-221ENST00000555773 CXorf56Q9H5V9 222 aa10.61□□□□□ -0.71
SHMT2-221ENST00000555773 TCF7L1Q9HCS4 588 aa10.61□□□□□ -0.71
SHMT2-221ENST00000555773 IL19Q9UHD0 177 aa10.61□□□□□ -0.71
SHMT2-221ENST00000555773 HECTD1Q9ULT8 2610 aa10.6□□□□□ -0.71
SHMT2-221ENST00000555773 A0A1W2PPK0 400 aa10.6□□□□□ -0.71
SHMT2-221ENST00000555773 MEGF11A6BM72 1044 aa10.6□□□□□ -0.71
SHMT2-221ENST00000555773 OR5B21A6NL26 309 aa10.6□□□□□ -0.71
SHMT2-221ENST00000555773 MAGEB3O15480 346 aa10.6□□□□□ -0.71
SHMT2-221ENST00000555773 MLNRO43193 412 aa10.6□□□□□ -0.71
SHMT2-221ENST00000555773 SULT1B1O43704 296 aa10.6□□□□□ -0.71
SHMT2-221ENST00000555773 AIREO43918 545 aa10.6□□□□□ -0.71
SHMT2-221ENST00000555773 ALDOBP05062 364 aa10.6□□□□□ -0.71
SHMT2-221ENST00000555773 OCMP0CE72 109 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-221ENST00000555773 PRF1P14222 555 aa10.6□□□□□ -0.71
SHMT2-221ENST00000555773 GADD45AP24522 165 aa10.6□□□□□ -0.71
SHMT2-221ENST00000555773 CD200P41217 278 aa10.6□□□□□ -0.71
SHMT2-221ENST00000555773 SRP9P49458 86 aaKnown RBP10.6□□□□□ -0.71
SHMT2-221ENST00000555773 PPP3R1P63098 170 aa10.6□□□□□ -0.71
SHMT2-221ENST00000555773 GNG3P63215 75 aa10.6□□□□□ -0.71
SHMT2-221ENST00000555773 BLMHQ13867 455 aa10.6□□□□□ -0.71
SHMT2-221ENST00000555773 INSL4Q14641 139 aa10.6□□□□□ -0.71
SHMT2-221ENST00000555773 CNN3Q15417 329 aaKnown RBP10.6□□□□□ -0.71
SHMT2-221ENST00000555773 FAM76BQ5HYJ3 339 aa10.6□□□□□ -0.71
SHMT2-221ENST00000555773 PLCXD3Q63HM9 321 aa10.6□□□□□ -0.71
SHMT2-221ENST00000555773 ANKRD13BQ86YJ7 626 aa10.6□□□□□ -0.71
SHMT2-221ENST00000555773 OR1M1Q8NGA1 313 aa10.6□□□□□ -0.71
SHMT2-221ENST00000555773 NEU4Q8WWR8 484 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-221ENST00000555773 ERGIC1Q969X5 290 aa10.6□□□□□ -0.71
SHMT2-221ENST00000555773 RNF170Q96K19 258 aa10.6□□□□□ -0.71
SHMT2-221ENST00000555773 CCL19Q99731 98 aa10.6□□□□□ -0.71
SHMT2-221ENST00000555773 VRK1Q99986 396 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-221ENST00000555773 ADAT1Q9BUB4 502 aaKnown RBP10.6□□□□□ -0.71
SHMT2-221ENST00000555773 RTL8AQ9BWD3 113 aa10.6□□□□□ -0.71
SHMT2-221ENST00000555773 CACNG6Q9BXT2 260 aa10.6□□□□□ -0.71
SHMT2-221ENST00000555773 EGLN1Q9GZT9 426 aa10.6□□□□□ -0.71
SHMT2-221ENST00000555773 OR51E2Q9H255 320 aa10.6□□□□□ -0.71
SHMT2-221ENST00000555773 EXOSC4Q9NPD3 245 aaKnown RBP10.6□□□□□ -0.71
SHMT2-221ENST00000555773 TMEM138Q9NPI0 162 aa10.6□□□□□ -0.71
SHMT2-221ENST00000555773 GPR173Q9NS66 373 aa10.6□□□□□ -0.71
SHMT2-221ENST00000555773 SNTG1Q9NSN8 517 aa10.6□□□□□ -0.71
SHMT2-221ENST00000555773 DECR2Q9NUI1 292 aa10.6□□□□□ -0.71
SHMT2-221ENST00000555773 TXNL4BQ9NX01 149 aaKnown RBP10.6□□□□□ -0.71
SHMT2-221ENST00000555773 CENPEQ02224 2701 aa10.6□□□□□ -0.71
SHMT2-221ENST00000555773 TRAV1-2A0A0B4J238 106 aa10.59□□□□□ -0.71
SHMT2-221ENST00000555773 IGKV1-9A0A0C4DH69 117 aa10.59□□□□□ -0.71
SHMT2-221ENST00000555773 TMEM210A6NLX4 147 aa10.59□□□□□ -0.71
SHMT2-221ENST00000555773 H0YL77 283 aa10.59□□□□□ -0.71
SHMT2-221ENST00000555773 PTBP3O95758 552 aaKnown RBP10.59□□□□□ -0.71
SHMT2-221ENST00000555773 TNFRSF1AP19438 455 aa10.59□□□□□ -0.71
SHMT2-221ENST00000555773 BDKRB2P30411 391 aa10.59□□□□□ -0.71
SHMT2-221ENST00000555773 PSMD7P51665 324 aa10.59□□□□□ -0.71
SHMT2-221ENST00000555773 TNFAIP6P98066 277 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-221ENST00000555773 CEP78Q5JTW2 689 aa10.59□□□□□ -0.71
SHMT2-221ENST00000555773 ASPHD2Q6ICH7 369 aa10.59□□□□□ -0.71
SHMT2-221ENST00000555773 CDH26Q8IXH8 852 aa10.59□□□□□ -0.71
SHMT2-221ENST00000555773 OR13C9Q8NGT0 318 aa10.59□□□□□ -0.71
SHMT2-221ENST00000555773 GTF3AQ92664 365 aaKnown RBP10.59□□□□□ -0.71
SHMT2-221ENST00000555773 CPNE2Q96FN4 548 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-221ENST00000555773 TRMT61AQ96FX7 289 aaKnown RBP10.59□□□□□ -0.71
SHMT2-221ENST00000555773 KCTD7Q96MP8 289 aa10.59□□□□□ -0.71
SHMT2-221ENST00000555773 CHCHD6Q9BRQ6 235 aa10.59□□□□□ -0.71
SHMT2-221ENST00000555773 PPIL3Q9H2H8 161 aaKnown RBP10.59□□□□□ -0.71
SHMT2-221ENST00000555773 PPP1R3EQ9H7J1 279 aa10.59□□□□□ -0.71
SHMT2-221ENST00000555773 TAS2R4Q9NYW5 299 aa10.59□□□□□ -0.71
SHMT2-221ENST00000555773 AKAP6Q13023 2319 aa10.59□□□□□ -0.71
SHMT2-221ENST00000555773 LOC100506127A0A0U1RQW1 187 aa10.58□□□□□ -0.72
SHMT2-221ENST00000555773 PQLC2LA1A4F0 135 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms