RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 MAS1P04201 325 aa9.6□□□□□ -0.87
SHMT2-220ENST00000555634 AZGP1P25311 298 aaKnown RBP9.6□□□□□ -0.87
SHMT2-220ENST00000555634 MPV17P39210 176 aa9.6□□□□□ -0.87
SHMT2-220ENST00000555634 SRP9P49458 86 aaKnown RBP9.6□□□□□ -0.87
SHMT2-220ENST00000555634 RBP2P50120 134 aa9.6□□□□□ -0.87
SHMT2-220ENST00000555634 ZNF81P51508 661 aa9.6□□□□□ -0.87
SHMT2-220ENST00000555634 ATP1B3P54709 279 aa9.6□□□□□ -0.87
SHMT2-220ENST00000555634 NCS1P62166 190 aa9.6□□□□□ -0.87
SHMT2-220ENST00000555634 MXD1Q05195 221 aa9.6□□□□□ -0.87
SHMT2-220ENST00000555634 PSG7Q13046 419 aa9.6□□□□□ -0.87
SHMT2-220ENST00000555634 EFNB3Q15768 340 aa9.6□□□□□ -0.87
SHMT2-220ENST00000555634 ADIPOQQ15848 244 aa9.6□□□□□ -0.87
SHMT2-220ENST00000555634 CTF1Q16619 201 aa9.6□□□□□ -0.87
SHMT2-220ENST00000555634 CLEC18BQ6UXF7 455 aa9.6□□□□□ -0.87
SHMT2-220ENST00000555634 UNQ9370/PRO34162Q6UXP9 181 aa9.6□□□□□ -0.87
SHMT2-220ENST00000555634 TMEM91Q6ZNR0 172 aa9.6□□□□□ -0.87
SHMT2-220ENST00000555634 MOB3CQ70IA8 216 aa9.6□□□□□ -0.87
SHMT2-220ENST00000555634 MUC15Q8N387 334 aa9.6□□□□□ -0.87
SHMT2-220ENST00000555634 CLEC18CQ8NCF0 446 aa9.6□□□□□ -0.87
SHMT2-220ENST00000555634 DNAAF1Q8NEP3 725 aa9.6□□□□□ -0.87
SHMT2-220ENST00000555634 C12orf43Q96C57 262 aaKnown RBP9.6□□□□□ -0.87
SHMT2-220ENST00000555634 SORCS2Q96PQ0 1159 aa9.6□□□□□ -0.87
SHMT2-220ENST00000555634 TMEM204Q9BSN7 226 aa9.6□□□□□ -0.87
SHMT2-220ENST00000555634 MRI1Q9BV20 369 aa9.6□□□□□ -0.87
SHMT2-220ENST00000555634 EGLN1Q9GZT9 426 aa9.6□□□□□ -0.87
SHMT2-220ENST00000555634 MS4A5Q9H3V2 200 aa9.6□□□□□ -0.87
SHMT2-220ENST00000555634 POFUT1Q9H488 388 aa9.6□□□□□ -0.87
SHMT2-220ENST00000555634 UBTD1Q9HAC8 227 aa9.6□□□□□ -0.87
SHMT2-220ENST00000555634 GPR173Q9NS66 373 aa9.6□□□□□ -0.87
SHMT2-220ENST00000555634 TAAR3PQ9P1P4 343 aa9.6□□□□□ -0.87
SHMT2-220ENST00000555634 PMF1-BGLAPU3KQ54 211 aa9.6□□□□□ -0.87
SHMT2-220ENST00000555634 PLCE1Q9P212 2302 aa9.59□□□□□ -0.87
SHMT2-220ENST00000555634 USP9XQ93008 2570 aaPredicted RBP9.59□□□□□ -0.87
SHMT2-220ENST00000555634 IGLV3-9A0A075B6K5 115 aa9.59□□□□□ -0.87
SHMT2-220ENST00000555634 FAM230AA0A1W2PPH8 454 aa9.59□□□□□ -0.87
SHMT2-220ENST00000555634 ALX3O95076 343 aa9.59□□□□□ -0.87
SHMT2-220ENST00000555634 ATF1P18846 271 aa9.59□□□□□ -0.87
SHMT2-220ENST00000555634 CA6P23280 308 aa9.59□□□□□ -0.87
SHMT2-220ENST00000555634 ACKR3P25106 362 aa9.59□□□□□ -0.87
SHMT2-220ENST00000555634 SDC2P34741 201 aa9.59□□□□□ -0.87
SHMT2-220ENST00000555634 ZNF93P35789 620 aaPredicted RBP9.59□□□□□ -0.87
SHMT2-220ENST00000555634 RORCP51449 518 aa9.59□□□□□ -0.87
SHMT2-220ENST00000555634 FUT6P51993 359 aa9.59□□□□□ -0.87
SHMT2-220ENST00000555634 PRSS12P56730 875 aa9.59□□□□□ -0.87
SHMT2-220ENST00000555634 GNG3P63215 75 aa9.59□□□□□ -0.87
SHMT2-220ENST00000555634 INSL4Q14641 139 aa9.59□□□□□ -0.87
SHMT2-220ENST00000555634 DGUOKQ16854 277 aa9.59□□□□□ -0.87
SHMT2-220ENST00000555634 PCGF3Q3KNV8 242 aa9.59□□□□□ -0.87
SHMT2-220ENST00000555634 CEACAM21Q3KPI0 293 aa9.59□□□□□ -0.87
SHMT2-220ENST00000555634 FAM209AQ5JX71 171 aa9.59□□□□□ -0.87
SHMT2-220ENST00000555634 FAM27D1Q5T7N8 215 aa9.59□□□□□ -0.87
SHMT2-220ENST00000555634 MZT2AQ6P582 158 aa9.59□□□□□ -0.87
SHMT2-220ENST00000555634 C20orf204Q6ZNR8 217 aa9.59□□□□□ -0.87
SHMT2-220ENST00000555634 ZNF573Q86YE8 665 aa9.59□□□□□ -0.87
SHMT2-220ENST00000555634 CDH26Q8IXH8 852 aa9.59□□□□□ -0.87
SHMT2-220ENST00000555634 OR2Z1Q8NG97 314 aa9.59□□□□□ -0.87
SHMT2-220ENST00000555634 TRMT10AQ8TBZ6 339 aaKnown RBP9.59□□□□□ -0.87
SHMT2-220ENST00000555634 UBASH3BQ8TF42 649 aa9.59□□□□□ -0.87
SHMT2-220ENST00000555634 NPRL2Q8WTW4 380 aa9.59□□□□□ -0.87
SHMT2-220ENST00000555634 ELMOD3Q96FG2 381 aa9.59□□□□□ -0.87
SHMT2-220ENST00000555634 UQCC2Q9BRT2 126 aa9.59□□□□□ -0.87
SHMT2-220ENST00000555634 MRPL37Q9BZE1 423 aaKnown RBP9.59□□□□□ -0.87
SHMT2-220ENST00000555634 NAA50Q9GZZ1 169 aaKnown RBP9.59□□□□□ -0.87
SHMT2-220ENST00000555634 RBM38Q9H0Z9 239 aaKnown RBP9.59□□□□□ -0.87
SHMT2-220ENST00000555634 CXXC4Q9H2H0 198 aa9.59□□□□□ -0.87
SHMT2-220ENST00000555634 CLEC4MQ9H2X3 399 aaPredicted RBP9.59□□□□□ -0.87
SHMT2-220ENST00000555634 METTL17Q9H7H0 456 aaPredicted RBP9.59□□□□□ -0.87
SHMT2-220ENST00000555634 PCDHB16Q9NRJ7 776 aa9.59□□□□□ -0.87
SHMT2-220ENST00000555634 CCDC59Q9P031 241 aaKnown RBP9.59□□□□□ -0.87
SHMT2-220ENST00000555634 POLDIP2Q9Y2S7 368 aa9.59□□□□□ -0.87
SHMT2-220ENST00000555634 RHBDD3Q9Y3P4 386 aa9.59□□□□□ -0.87
SHMT2-220ENST00000555634 V9GY05 133 aa9.59□□□□□ -0.87
SHMT2-220ENST00000555634 TANC2Q9HCD6 1990 aa9.59□□□□□ -0.87
SHMT2-220ENST00000555634 PRR14LQ5THK1 2151 aa9.58□□□□□ -0.88
SHMT2-220ENST00000555634 C5orf63A6NC05 138 aa9.58□□□□□ -0.88
SHMT2-220ENST00000555634 A6NIN4 97 aa9.58□□□□□ -0.88
SHMT2-220ENST00000555634 NOTOA8MTQ0 251 aa9.58□□□□□ -0.88
SHMT2-220ENST00000555634 E7EQL1 145 aa9.58□□□□□ -0.88
SHMT2-220ENST00000555634 LMX1BO60663 402 aa9.58□□□□□ -0.88
SHMT2-220ENST00000555634 ALDOBP05062 364 aa9.58□□□□□ -0.88
SHMT2-220ENST00000555634 RNF224P0DH78 156 aa9.58□□□□□ -0.88
SHMT2-220ENST00000555634 IGFBP3P17936 291 aaPredicted RBP9.58□□□□□ -0.88
SHMT2-220ENST00000555634 TNFRSF1AP19438 455 aa9.58□□□□□ -0.88
SHMT2-220ENST00000555634 MTCP1P56278 107 aa9.58□□□□□ -0.88
SHMT2-220ENST00000555634 TLE4Q04727 773 aa9.58□□□□□ -0.88
SHMT2-220ENST00000555634 HNRNPA0Q13151 305 aaKnown RBP9.58□□□□□ -0.88
SHMT2-220ENST00000555634 TESK1Q15569 626 aa9.58□□□□□ -0.88
SHMT2-220ENST00000555634 FAM189A2Q15884 450 aa9.58□□□□□ -0.88
SHMT2-220ENST00000555634 RAB11BQ15907 218 aa9.58□□□□□ -0.88
SHMT2-220ENST00000555634 TMEM42Q69YG0 159 aa9.58□□□□□ -0.88
SHMT2-220ENST00000555634 FIP1L1Q6UN15 594 aaKnown RBP9.58□□□□□ -0.88
SHMT2-220ENST00000555634 OR10AD1Q8NGE0 317 aa9.58□□□□□ -0.88
SHMT2-220ENST00000555634 OR5A2Q8NGI9 324 aa9.58□□□□□ -0.88
SHMT2-220ENST00000555634 OR6M1Q8NGM8 313 aa9.58□□□□□ -0.88
SHMT2-220ENST00000555634 ZNF671Q8TAW3 534 aa9.58□□□□□ -0.88
SHMT2-220ENST00000555634 NDNFQ8TB73 568 aa9.58□□□□□ -0.88
SHMT2-220ENST00000555634 RNF170Q96K19 258 aa9.58□□□□□ -0.88
SHMT2-220ENST00000555634 HS3ST6Q96QI5 342 aa9.58□□□□□ -0.88
SHMT2-220ENST00000555634 SLC30A2Q9BRI3 323 aa9.58□□□□□ -0.88
SHMT2-220ENST00000555634 TPK1Q9H3S4 243 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms