RNA–Protein interactions for RNA: ENST00000555576.5

TUBB3-208, Transcript of tubulin beta 3 class III, human

TSL 4 BASIC

Gene TUBB3, Length 572 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBB3-208	ENST00000555576	ACSM1	Q08AH1	577 aa		10.82	□□□□□ -0.68
TUBB3-208	ENST00000555576	TAF13	Q15543	124 aa		10.82	□□□□□ -0.68
TUBB3-208	ENST00000555576	TIGD6	Q17RP2	521 aa		10.82	□□□□□ -0.68
TUBB3-208	ENST00000555576	FBLN7	Q53RD9	439 aa		10.82	□□□□□ -0.68
TUBB3-208	ENST00000555576	LRRC10	Q5BKY1	277 aa		10.82	□□□□□ -0.68
TUBB3-208	ENST00000555576	FAM76B	Q5HYJ3	339 aa		10.82	□□□□□ -0.68
TUBB3-208	ENST00000555576	HIST2H2BD	Q6DRA6	164 aa		10.82	□□□□□ -0.68
TUBB3-208	ENST00000555576	FAM57B	Q71RH2	274 aa		10.82	□□□□□ -0.68
TUBB3-208	ENST00000555576	BEND2	Q8NDZ0	799 aa		10.82	□□□□□ -0.68
TUBB3-208	ENST00000555576	OR52H1	Q8NGJ2	320 aa		10.82	□□□□□ -0.68
TUBB3-208	ENST00000555576	OR10Z1	Q8NGY1	313 aa		10.82	□□□□□ -0.68
TUBB3-208	ENST00000555576	CFHR4	Q92496	578 aa		10.82	□□□□□ -0.68
TUBB3-208	ENST00000555576	NSMCE2	Q96MF7	247 aa		10.82	□□□□□ -0.68
TUBB3-208	ENST00000555576	ABHD6	Q9BV23	337 aa		10.82	□□□□□ -0.68
TUBB3-208	ENST00000555576	PPA2	Q9H2U2	334 aa		10.82	□□□□□ -0.68
TUBB3-208	ENST00000555576	TBC1D23	Q9NUY8	699 aa		10.82	□□□□□ -0.68
TUBB3-208	ENST00000555576	VNN3	Q9NY84	501 aa		10.82	□□□□□ -0.68
TUBB3-208	ENST00000555576	SIGLEC9	Q9Y336	463 aa		10.82	□□□□□ -0.68
TUBB3-208	ENST00000555576	NOTCH3	Q9UM47	2321 aa		10.81	□□□□□ -0.68
TUBB3-208	ENST00000555576	CFL1	P23528	166 aa	Known RBP	10.81	□□□□□ -0.68
TUBB3-208	ENST00000555576	EEF1B2	P24534	225 aa	Known RBP	10.81	□□□□□ -0.68
TUBB3-208	ENST00000555576	GABRA5	P31644	462 aa		10.81	□□□□□ -0.68
TUBB3-208	ENST00000555576	NAA10	P41227	235 aa	Predicted RBP	10.81	□□□□□ -0.68
TUBB3-208	ENST00000555576	SLC15A1	P46059	708 aa		10.81	□□□□□ -0.68
TUBB3-208	ENST00000555576	CAV3	P56539	151 aa		10.81	□□□□□ -0.68
TUBB3-208	ENST00000555576	IL5RA	Q01344	420 aa		10.81	□□□□□ -0.68
TUBB3-208	ENST00000555576	EIF2B1	Q14232	305 aa	Known RBP	10.81	□□□□□ -0.68
TUBB3-208	ENST00000555576	HERPUD1	Q15011	391 aa		10.81	□□□□□ -0.68
TUBB3-208	ENST00000555576	NCR3LG1	Q68D85	454 aa		10.81	□□□□□ -0.68
TUBB3-208	ENST00000555576		Q6ZPA2	131 aa		10.81	□□□□□ -0.68
TUBB3-208	ENST00000555576	TIGD4	Q8IY51	512 aa		10.81	□□□□□ -0.68
TUBB3-208	ENST00000555576	PGAM4	Q8N0Y7	254 aa		10.81	□□□□□ -0.68
TUBB3-208	ENST00000555576	AQP11	Q8NBQ7	271 aa		10.81	□□□□□ -0.68
TUBB3-208	ENST00000555576	CSNK2A3	Q8NEV1	391 aa		10.81	□□□□□ -0.68
TUBB3-208	ENST00000555576	OR6K6	Q8NGW6	343 aa		10.81	□□□□□ -0.68
TUBB3-208	ENST00000555576	OR5P3	Q8WZ94	311 aa		10.81	□□□□□ -0.68
TUBB3-208	ENST00000555576	RPL3L	Q92901	407 aa	Known RBP	10.81	□□□□□ -0.68
TUBB3-208	ENST00000555576	TSSK6	Q9BXA6	273 aa		10.81	□□□□□ -0.68
TUBB3-208	ENST00000555576	RGCC	Q9H4X1	137 aa		10.81	□□□□□ -0.68
TUBB3-208	ENST00000555576	METTL8	Q9H825	291 aa	Known RBP	10.81	□□□□□ -0.68
TUBB3-208	ENST00000555576	SNTG1	Q9NSN8	517 aa		10.81	□□□□□ -0.68
TUBB3-208	ENST00000555576	ARMC1	Q9NVT9	282 aa		10.81	□□□□□ -0.68
TUBB3-208	ENST00000555576	DNAJC27	Q9NZQ0	273 aa		10.81	□□□□□ -0.68
TUBB3-208	ENST00000555576	SLC25A10	Q9UBX3	287 aa	Predicted RBP	10.81	□□□□□ -0.68
TUBB3-208	ENST00000555576	ZNF222	Q9UK12	451 aa		10.81	□□□□□ -0.68
TUBB3-208	ENST00000555576	ZNF281	Q9Y2X9	895 aa		10.81	□□□□□ -0.68
TUBB3-208	ENST00000555576	TMEM210	A6NLX4	147 aa		10.8	□□□□□ -0.68
TUBB3-208	ENST00000555576		H3BUX3	64 aa		10.8	□□□□□ -0.68
TUBB3-208	ENST00000555576	TNFRSF11B	O00300	401 aa		10.8	□□□□□ -0.68
TUBB3-208	ENST00000555576	SOX14	O95416	240 aa		10.8	□□□□□ -0.68
TUBB3-208	ENST00000555576	PAH	P00439	452 aa		10.8	□□□□□ -0.68
TUBB3-208	ENST00000555576	CST4	P01036	141 aa		10.8	□□□□□ -0.68
TUBB3-208	ENST00000555576	ACAA1	P09110	424 aa	Predicted RBP	10.8	□□□□□ -0.68
TUBB3-208	ENST00000555576	HSD11B1	P28845	292 aa		10.8	□□□□□ -0.68
TUBB3-208	ENST00000555576	GNAL	P38405	381 aa		10.8	□□□□□ -0.68
TUBB3-208	ENST00000555576	BLVRA	P53004	296 aa		10.8	□□□□□ -0.68
TUBB3-208	ENST00000555576	GMFB	P60983	142 aa		10.8	□□□□□ -0.68
TUBB3-208	ENST00000555576	PRDX4	Q13162	271 aa		10.8	□□□□□ -0.68
TUBB3-208	ENST00000555576	SAMD4B	Q5PRF9	694 aa	Known RBP	10.8	□□□□□ -0.68
TUBB3-208	ENST00000555576	KRT74	Q7RTS7	529 aa		10.8	□□□□□ -0.68
TUBB3-208	ENST00000555576	LINC00471	Q8N535	108 aa		10.8	□□□□□ -0.68
TUBB3-208	ENST00000555576	OR2T33	Q8NG76	320 aa		10.8	□□□□□ -0.68
TUBB3-208	ENST00000555576	H1FX	Q92522	213 aa	Known RBP	10.8	□□□□□ -0.68
TUBB3-208	ENST00000555576	LYZL4	Q96KX0	146 aa		10.8	□□□□□ -0.68
TUBB3-208	ENST00000555576	INTS14	Q96SY0	518 aa		10.8	□□□□□ -0.68
TUBB3-208	ENST00000555576	MICU1	Q9BPX6	476 aa		10.8	□□□□□ -0.68
TUBB3-208	ENST00000555576	RTL8A	Q9BWD3	113 aa		10.8	□□□□□ -0.68
TUBB3-208	ENST00000555576	OR10A2	Q9H208	303 aa		10.8	□□□□□ -0.68
TUBB3-208	ENST00000555576	ELL3	Q9HB65	397 aa	Predicted RBP	10.8	□□□□□ -0.68
TUBB3-208	ENST00000555576	CMC2	Q9NRP2	79 aa		10.8	□□□□□ -0.68
TUBB3-208	ENST00000555576	ZNF391	Q9UJN7	358 aa		10.8	□□□□□ -0.68
TUBB3-208	ENST00000555576	FOXJ3	Q9UPW0	622 aa		10.8	□□□□□ -0.68
TUBB3-208	ENST00000555576	BAIAP2	Q9UQB8	552 aa		10.8	□□□□□ -0.68
TUBB3-208	ENST00000555576	MAB21L2	Q9Y586	359 aa		10.8	□□□□□ -0.68
TUBB3-208	ENST00000555576	MPC1	Q9Y5U8	109 aa		10.8	□□□□□ -0.68
TUBB3-208	ENST00000555576	NBEAL2	Q6ZNJ1	2754 aa		10.79	□□□□□ -0.68
TUBB3-208	ENST00000555576	IGKV1D-17	A0A075B6S4	117 aa		10.79	□□□□□ -0.68
TUBB3-208	ENST00000555576	ANKRD61	A6NGH8	418 aa		10.79	□□□□□ -0.68
TUBB3-208	ENST00000555576	NKX6-3	A6NJ46	265 aa		10.79	□□□□□ -0.68
TUBB3-208	ENST00000555576	FAM183A	A6NL82	134 aa		10.79	□□□□□ -0.68
TUBB3-208	ENST00000555576	ANXA2P2	A6NMY6	339 aa		10.79	□□□□□ -0.68
TUBB3-208	ENST00000555576	ZNF850	A8MQ14	1090 aa		10.79	□□□□□ -0.68
TUBB3-208	ENST00000555576	AKR7A2	O43488	359 aa		10.79	□□□□□ -0.68
TUBB3-208	ENST00000555576	RHBDL1	O75783	438 aa		10.79	□□□□□ -0.68
TUBB3-208	ENST00000555576	CCNB2	O95067	398 aa		10.79	□□□□□ -0.68
TUBB3-208	ENST00000555576	APOC1	P02654	83 aa		10.79	□□□□□ -0.68
TUBB3-208	ENST00000555576	ATP6V1B2	P21281	511 aa		10.79	□□□□□ -0.68
TUBB3-208	ENST00000555576	KIR2DS4	P43632	304 aa		10.79	□□□□□ -0.68
TUBB3-208	ENST00000555576	PPP1R8	Q12972	351 aa	Known RBP	10.79	□□□□□ -0.68
TUBB3-208	ENST00000555576	GFOD2	Q3B7J2	385 aa		10.79	□□□□□ -0.68
TUBB3-208	ENST00000555576	ERI1	Q8IV48	349 aa	Known RBP	10.79	□□□□□ -0.68
TUBB3-208	ENST00000555576	OR6N2	Q8NGY6	317 aa		10.79	□□□□□ -0.68
TUBB3-208	ENST00000555576	DUS3L	Q96G46	650 aa	Known RBP	10.79	□□□□□ -0.68
TUBB3-208	ENST00000555576	DGCR6L	Q9BY27	220 aa		10.79	□□□□□ -0.68
TUBB3-208	ENST00000555576	MEGF9	Q9H1U4	602 aa		10.79	□□□□□ -0.68
TUBB3-208	ENST00000555576	RANBP3	Q9H6Z4	567 aa	Predicted RBP	10.79	□□□□□ -0.68
TUBB3-208	ENST00000555576	SP140L	Q9H930	580 aa		10.79	□□□□□ -0.68
TUBB3-208	ENST00000555576	MED20	Q9H944	212 aa		10.79	□□□□□ -0.68
TUBB3-208	ENST00000555576	NLK	Q9UBE8	527 aa		10.79	□□□□□ -0.68
TUBB3-208	ENST00000555576	TCRBV5S2	A0A599	114 aa		10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms