RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 R4GMQ9 66 aa17.09■□□□□ 0.33
VTI1B-205ENST00000555543 IGHV3OR15-7A0A075B7D8 119 aa17.08■□□□□ 0.32
VTI1B-205ENST00000555543 ANKRD65E5RJM6 399 aa17.08■□□□□ 0.32
VTI1B-205ENST00000555543 LOC110117498-PIK3R3F6TDL0 507 aa17.08■□□□□ 0.32
VTI1B-205ENST00000555543 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.08■□□□□ 0.32
VTI1B-205ENST00000555543 TCF21O43680 179 aa17.08■□□□□ 0.32
VTI1B-205ENST00000555543 RGS9O75916 674 aaPredicted RBP17.08■□□□□ 0.32
VTI1B-205ENST00000555543 MAP2K3P46734 347 aa17.08■□□□□ 0.32
VTI1B-205ENST00000555543 EGR3Q06889 387 aa17.08■□□□□ 0.32
VTI1B-205ENST00000555543 POU4F2Q12837 409 aa17.08■□□□□ 0.32
VTI1B-205ENST00000555543 WDR25Q64LD2 544 aaPredicted RBP17.08■□□□□ 0.32
VTI1B-205ENST00000555543 KRT74Q7RTS7 529 aa17.08■□□□□ 0.32
VTI1B-205ENST00000555543 C10orf67Q8IYJ2 551 aa17.08■□□□□ 0.32
VTI1B-205ENST00000555543 TEX29Q8N6K0 151 aa17.08■□□□□ 0.32
VTI1B-205ENST00000555543 NANPQ8TBE9 248 aa17.08■□□□□ 0.32
VTI1B-205ENST00000555543 OCEL1Q9H607 264 aa17.08■□□□□ 0.32
VTI1B-205ENST00000555543 RNPEPL1Q9HAU8 725 aa17.08■□□□□ 0.32
VTI1B-205ENST00000555543 CLN8Q9UBY8 286 aa17.08■□□□□ 0.32
VTI1B-205ENST00000555543 AUP1Q9Y679 476 aa17.08■□□□□ 0.32
VTI1B-205ENST00000555543 TRAV38-1A0A0B4J264 116 aa17.07■□□□□ 0.32
VTI1B-205ENST00000555543 IGHV2-70DA0A0C4DH43 119 aa17.07■□□□□ 0.32
VTI1B-205ENST00000555543 ZNF816-ZNF321PA0A0X1KG74 233 aa17.07■□□□□ 0.32
VTI1B-205ENST00000555543 CDIPTO14735 213 aa17.07■□□□□ 0.32
VTI1B-205ENST00000555543 ENTPD6O75354 484 aa17.07■□□□□ 0.32
VTI1B-205ENST00000555543 FCN3O75636 299 aa17.07■□□□□ 0.32
VTI1B-205ENST00000555543 GYPAP02724 150 aa17.07■□□□□ 0.32
VTI1B-205ENST00000555543 OR2T7P0C7T2 308 aa17.07■□□□□ 0.32
VTI1B-205ENST00000555543 FAHP16930 419 aa17.07■□□□□ 0.32
VTI1B-205ENST00000555543 ELF3P78545 371 aaPredicted RBP17.07■□□□□ 0.32
VTI1B-205ENST00000555543 DMRTC1Q5HYR2 192 aa17.07■□□□□ 0.32
VTI1B-205ENST00000555543 ZNF684Q5T5D7 378 aa17.07■□□□□ 0.32
VTI1B-205ENST00000555543 BCL2L15Q5TBC7 163 aa17.07■□□□□ 0.32
VTI1B-205ENST00000555543 TEX36Q5VZQ5 186 aa17.07■□□□□ 0.32
VTI1B-205ENST00000555543 ZDHHC23Q8IYP9 409 aa17.07■□□□□ 0.32
VTI1B-205ENST00000555543 OR10H4Q8NGA5 316 aa17.07■□□□□ 0.32
VTI1B-205ENST00000555543 OR2T27Q8NH04 317 aa17.07■□□□□ 0.32
VTI1B-205ENST00000555543 RPL3LQ92901 407 aaKnown RBP17.07■□□□□ 0.32
VTI1B-205ENST00000555543 SEH1LQ96EE3 360 aa17.07■□□□□ 0.32
VTI1B-205ENST00000555543 C9orf16Q9BUW7 83 aa17.07■□□□□ 0.32
VTI1B-205ENST00000555543 MOB1AQ9H8S9 216 aa17.07■□□□□ 0.32
VTI1B-205ENST00000555543 SMURF1Q9HCE7 757 aa17.07■□□□□ 0.32
VTI1B-205ENST00000555543 ABCB9Q9NP78 766 aa17.07■□□□□ 0.32
VTI1B-205ENST00000555543 AASSQ9UDR5 926 aa17.07■□□□□ 0.32
VTI1B-205ENST00000555543 OR52A1Q9UKL2 312 aa17.07■□□□□ 0.32
VTI1B-205ENST00000555543 SLC22A13Q9Y226 551 aa17.07■□□□□ 0.32
VTI1B-205ENST00000555543 ANK2Q01484 3957 aa17.06■□□□□ 0.32
VTI1B-205ENST00000555543 C22orf46C9J442 243 aa17.06■□□□□ 0.32
VTI1B-205ENST00000555543 ADAM20O43506 726 aa17.06■□□□□ 0.32
VTI1B-205ENST00000555543 RPP14O95059 124 aaKnown RBP17.06■□□□□ 0.32
VTI1B-205ENST00000555543 VENTXO95231 258 aa17.06■□□□□ 0.32
VTI1B-205ENST00000555543 PAX8Q06710 450 aa17.06■□□□□ 0.32
VTI1B-205ENST00000555543 TMED1Q13445 227 aa17.06■□□□□ 0.32
VTI1B-205ENST00000555543 KCNJ8Q15842 424 aa17.06■□□□□ 0.32
VTI1B-205ENST00000555543 KLF17Q5JT82 389 aaPredicted RBP17.06■□□□□ 0.32
VTI1B-205ENST00000555543 KCTD8Q6ZWB6 473 aa17.06■□□□□ 0.32
VTI1B-205ENST00000555543 ELMOD2Q8IZ81 293 aa17.06■□□□□ 0.32
VTI1B-205ENST00000555543 YIPF7Q8N8F6 280 aa17.06■□□□□ 0.32
VTI1B-205ENST00000555543 SEMA6DQ8NFY4 1073 aa17.06■□□□□ 0.32
VTI1B-205ENST00000555543 SPATA3Q8NHX4 192 aa17.06■□□□□ 0.32
VTI1B-205ENST00000555543 TRUB1Q8WWH5 349 aaKnown RBP17.06■□□□□ 0.32
VTI1B-205ENST00000555543 RAB40AQ8WXH6 277 aa17.06■□□□□ 0.32
VTI1B-205ENST00000555543 RFKQ969G6 155 aa17.06■□□□□ 0.32
VTI1B-205ENST00000555543 RNF170Q96K19 258 aa17.06■□□□□ 0.32
VTI1B-205ENST00000555543 DOCK11Q5JSL3 2073 aa17.05■□□□□ 0.32
VTI1B-205ENST00000555543 A0A1B0GTI1 187 aa17.05■□□□□ 0.32
VTI1B-205ENST00000555543 TMEM210A6NLX4 147 aa17.05■□□□□ 0.32
VTI1B-205ENST00000555543 SRRM5B3KS81 715 aa17.05■□□□□ 0.32
VTI1B-205ENST00000555543 DHRS3O75911 302 aa17.05■□□□□ 0.32
VTI1B-205ENST00000555543 KRT8P05787 483 aa17.05■□□□□ 0.32
VTI1B-205ENST00000555543 ATP6V1B1P15313 513 aa17.05■□□□□ 0.32
VTI1B-205ENST00000555543 CFHR2P36980 270 aa17.05■□□□□ 0.32
VTI1B-205ENST00000555543 GPM6AP51674 278 aa17.05■□□□□ 0.32
VTI1B-205ENST00000555543 SNRPGP62308 76 aaKnown RBP17.05■□□□□ 0.32
VTI1B-205ENST00000555543 ZNF85Q03923 595 aa17.05■□□□□ 0.32
VTI1B-205ENST00000555543 RIPPLY1Q0D2K3 151 aa17.05■□□□□ 0.32
VTI1B-205ENST00000555543 SCGB2A2Q13296 93 aa17.05■□□□□ 0.32
VTI1B-205ENST00000555543 FAM76BQ5HYJ3 339 aa17.05■□□□□ 0.32
VTI1B-205ENST00000555543 CEP78Q5JTW2 689 aa17.05■□□□□ 0.32
VTI1B-205ENST00000555543 LIPNQ5VXI9 398 aa17.05■□□□□ 0.32
VTI1B-205ENST00000555543 SCCPDHQ8NBX0 429 aa17.05■□□□□ 0.32
VTI1B-205ENST00000555543 C22orf15Q8WYQ4 148 aa17.05■□□□□ 0.32
VTI1B-205ENST00000555543 TECTBQ96PL2 329 aa17.05■□□□□ 0.32
VTI1B-205ENST00000555543 SLC6A7Q99884 636 aa17.05■□□□□ 0.32
VTI1B-205ENST00000555543 MRI1Q9BV20 369 aa17.05■□□□□ 0.32
VTI1B-205ENST00000555543 C19orf24Q9BVV8 132 aa17.05■□□□□ 0.32
VTI1B-205ENST00000555543 RASSF4Q9H2L5 321 aa17.05■□□□□ 0.32
VTI1B-205ENST00000555543 TRIM36Q9NQ86 728 aa17.05■□□□□ 0.32
VTI1B-205ENST00000555543 PIGLQ9Y2B2 252 aa17.05■□□□□ 0.32
VTI1B-205ENST00000555543 RRP15Q9Y3B9 282 aaKnown RBP17.05■□□□□ 0.32
VTI1B-205ENST00000555543 SNX5Q9Y5X3 404 aa17.05■□□□□ 0.32
VTI1B-205ENST00000555543 A0A1B0GW55 424 aa17.04■□□□□ 0.32
VTI1B-205ENST00000555543 P2RY10O00398 339 aa17.04■□□□□ 0.32
VTI1B-205ENST00000555543 DUX4L2P0CJ85 424 aa17.04■□□□□ 0.32
VTI1B-205ENST00000555543 DUX4L3P0CJ86 424 aa17.04■□□□□ 0.32
VTI1B-205ENST00000555543 DUX4L4P0CJ87 422 aa17.04■□□□□ 0.32
VTI1B-205ENST00000555543 DUX4L5P0CJ88 424 aa17.04■□□□□ 0.32
VTI1B-205ENST00000555543 DUX4L6P0CJ89 424 aa17.04■□□□□ 0.32
VTI1B-205ENST00000555543 DUX4L7P0CJ90 424 aa17.04■□□□□ 0.32
VTI1B-205ENST00000555543 ATP6V1E1P36543 226 aa17.04■□□□□ 0.32
VTI1B-205ENST00000555543 MTNR1AP48039 350 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms