RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 SOCS1O15524 211 aa3.22□□□□□ -1.89
CKS1BP1-201ENST00000555221 ERI3O43414 337 aaKnown RBP3.22□□□□□ -1.89
CKS1BP1-201ENST00000555221 CHST10O43529 356 aa3.22□□□□□ -1.89
CKS1BP1-201ENST00000555221 ZNF207O43670 478 aaKnown RBP3.22□□□□□ -1.89
CKS1BP1-201ENST00000555221 HSBP1O75506 76 aa3.22□□□□□ -1.89
CKS1BP1-201ENST00000555221 FARS2O95363 451 aaKnown RBP3.22□□□□□ -1.89
CKS1BP1-201ENST00000555221 HLA-DQA1P01909 254 aa3.22□□□□□ -1.89
CKS1BP1-201ENST00000555221 ZNF688P0C7X2 276 aa3.22□□□□□ -1.89
CKS1BP1-201ENST00000555221 PGA4P0DJD7 388 aa3.22□□□□□ -1.89
CKS1BP1-201ENST00000555221 PGA3P0DJD8 388 aa3.22□□□□□ -1.89
CKS1BP1-201ENST00000555221 PGA5P0DJD9 388 aa3.22□□□□□ -1.89
CKS1BP1-201ENST00000555221 NPY1RP25929 384 aa3.22□□□□□ -1.89
CKS1BP1-201ENST00000555221 HTR1DP28221 377 aa3.22□□□□□ -1.89
CKS1BP1-201ENST00000555221 TALDO1P37837 337 aa3.22□□□□□ -1.89
CKS1BP1-201ENST00000555221 SLC11A1P49279 550 aa3.22□□□□□ -1.89
CKS1BP1-201ENST00000555221 RPL23P62829 140 aaKnown RBP3.22□□□□□ -1.89
CKS1BP1-201ENST00000555221 CRADDP78560 199 aa3.22□□□□□ -1.89
CKS1BP1-201ENST00000555221 DOC2AQ14183 400 aa3.22□□□□□ -1.89
CKS1BP1-201ENST00000555221 RPEL1Q2QD12 228 aa3.22□□□□□ -1.89
CKS1BP1-201ENST00000555221 MPV17L2Q567V2 206 aa3.22□□□□□ -1.89
CKS1BP1-201ENST00000555221 GCSAMLQ5JQS6 135 aa3.22□□□□□ -1.89
CKS1BP1-201ENST00000555221 COPS6Q7L5N1 327 aa3.22□□□□□ -1.89
CKS1BP1-201ENST00000555221 SLC16A13Q7RTY0 426 aa3.22□□□□□ -1.89
CKS1BP1-201ENST00000555221 UNC93AQ86WB7 457 aa3.22□□□□□ -1.89
CKS1BP1-201ENST00000555221 CMTM8Q8IZV2 173 aa3.22□□□□□ -1.89
CKS1BP1-201ENST00000555221 APH1AQ96BI3 265 aa3.22□□□□□ -1.89
CKS1BP1-201ENST00000555221 SGTBQ96EQ0 304 aa3.22□□□□□ -1.89
CKS1BP1-201ENST00000555221 ZNF488Q96MN9 340 aa3.22□□□□□ -1.89
CKS1BP1-201ENST00000555221 SLIRPQ9GZT3 109 aaKnown RBP3.22□□□□□ -1.89
CKS1BP1-201ENST00000555221 DEFB129Q9H1M3 183 aa3.22□□□□□ -1.89
CKS1BP1-201ENST00000555221 C1orf198Q9H425 327 aa3.22□□□□□ -1.89
CKS1BP1-201ENST00000555221 CD209Q9NNX6 404 aa3.22□□□□□ -1.89
CKS1BP1-201ENST00000555221 SLC17A7Q9P2U7 560 aa3.22□□□□□ -1.89
CKS1BP1-201ENST00000555221 OPN4Q9UHM6 478 aa3.22□□□□□ -1.89
CKS1BP1-201ENST00000555221 TSSC4Q9Y5U2 329 aaPredicted RBP3.22□□□□□ -1.89
CKS1BP1-201ENST00000555221 RFNGQ9Y644 331 aa3.22□□□□□ -1.89
CKS1BP1-201ENST00000555221 RGPD1P0DJD0 1748 aa3.22□□□□□ -1.89
CKS1BP1-201ENST00000555221 ABCA3Q99758 1704 aa3.22□□□□□ -1.89
CKS1BP1-201ENST00000555221 CRYBG1Q9Y4K1 1723 aa3.22□□□□□ -1.89
CKS1BP1-201ENST00000555221 MYOM1P52179 1685 aa3.21□□□□□ -1.9
CKS1BP1-201ENST00000555221 TMEM150BA6NC51 233 aa3.21□□□□□ -1.9
CKS1BP1-201ENST00000555221 LRCOL1A6NCL2 159 aa3.21□□□□□ -1.9
CKS1BP1-201ENST00000555221 TRDMT1O14717 391 aaKnown RBP3.21□□□□□ -1.9
CKS1BP1-201ENST00000555221 TDP2O95551 362 aa3.21□□□□□ -1.9
CKS1BP1-201ENST00000555221 TACSTD2P09758 323 aa3.21□□□□□ -1.9
CKS1BP1-201ENST00000555221 OR8U9P0C7N5 309 aa3.21□□□□□ -1.9
CKS1BP1-201ENST00000555221 GFAPP14136 432 aa3.21□□□□□ -1.9
CKS1BP1-201ENST00000555221 MUC1P15941 1255 aaPredicted RBP3.21□□□□□ -1.9
CKS1BP1-201ENST00000555221 OPRK1P41145 380 aa3.21□□□□□ -1.9
CKS1BP1-201ENST00000555221 CXCL12P48061 93 aa3.21□□□□□ -1.9
CKS1BP1-201ENST00000555221 GFERP55789 205 aa3.21□□□□□ -1.9
CKS1BP1-201ENST00000555221 DAOAP59103 153 aa3.21□□□□□ -1.9
CKS1BP1-201ENST00000555221 CDK5Q00535 292 aa3.21□□□□□ -1.9
CKS1BP1-201ENST00000555221 HIKESHIQ53FT3 197 aa3.21□□□□□ -1.9
CKS1BP1-201ENST00000555221 AP1ARQ63HQ0 302 aa3.21□□□□□ -1.9
CKS1BP1-201ENST00000555221 H3F3CQ6NXT2 135 aa3.21□□□□□ -1.9
CKS1BP1-201ENST00000555221 UBAC2Q8NBM4 344 aa3.21□□□□□ -1.9
CKS1BP1-201ENST00000555221 PROKR2Q8NFJ6 384 aa3.21□□□□□ -1.9
CKS1BP1-201ENST00000555221 OR6N1Q8NGY5 312 aa3.21□□□□□ -1.9
CKS1BP1-201ENST00000555221 LILRB4Q8NHJ6 448 aa3.21□□□□□ -1.9
CKS1BP1-201ENST00000555221 NAT6Q93015 286 aa3.21□□□□□ -1.9
CKS1BP1-201ENST00000555221 API5Q9BZZ5 524 aaKnown RBP3.21□□□□□ -1.9
CKS1BP1-201ENST00000555221 IL22Q9GZX6 179 aa3.21□□□□□ -1.9
CKS1BP1-201ENST00000555221 TOLLIPQ9H0E2 274 aa3.21□□□□□ -1.9
CKS1BP1-201ENST00000555221 SIRT7Q9NRC8 400 aa3.21□□□□□ -1.9
CKS1BP1-201ENST00000555221 RGS18Q9NS28 235 aa3.21□□□□□ -1.9
CKS1BP1-201ENST00000555221 PDE4DIPQ5VU43 2346 aa3.21□□□□□ -1.9
CKS1BP1-201ENST00000555221 ANKRD26Q9UPS8 1709 aa3.21□□□□□ -1.9
CKS1BP1-201ENST00000555221 KDM6AO15550 1401 aaPredicted RBP3.2□□□□□ -1.9
CKS1BP1-201ENST00000555221 IGKV1-8A0A0C4DH67 115 aa3.2□□□□□ -1.9
CKS1BP1-201ENST00000555221 ZBTB5O15062 677 aa3.2□□□□□ -1.9
CKS1BP1-201ENST00000555221 SIVA1O15304 175 aa3.2□□□□□ -1.9
CKS1BP1-201ENST00000555221 NMT2O60551 498 aa3.2□□□□□ -1.9
CKS1BP1-201ENST00000555221 RAD1O60671 282 aa3.2□□□□□ -1.9
CKS1BP1-201ENST00000555221 CD37P11049 281 aa3.2□□□□□ -1.9
CKS1BP1-201ENST00000555221 MSR1P21757 451 aa3.2□□□□□ -1.9
CKS1BP1-201ENST00000555221 PEX19P40855 299 aa3.2□□□□□ -1.9
CKS1BP1-201ENST00000555221 PPICP45877 212 aa3.2□□□□□ -1.9
CKS1BP1-201ENST00000555221 SERPINB8P50452 374 aa3.2□□□□□ -1.9
CKS1BP1-201ENST00000555221 AP1S2P56377 157 aa3.2□□□□□ -1.9
CKS1BP1-201ENST00000555221 TAS2R46P59540 309 aa3.2□□□□□ -1.9
CKS1BP1-201ENST00000555221 KDSRQ06136 332 aa3.2□□□□□ -1.9
CKS1BP1-201ENST00000555221 GABRA6Q16445 453 aa3.2□□□□□ -1.9
CKS1BP1-201ENST00000555221 ZNF829Q3KNS6 432 aaPredicted RBP3.2□□□□□ -1.9
CKS1BP1-201ENST00000555221 KHDRBS2Q5VWX1 349 aaKnown RBP3.2□□□□□ -1.9
CKS1BP1-201ENST00000555221 SAXO2Q658L1 398 aa3.2□□□□□ -1.9
CKS1BP1-201ENST00000555221 ULK3Q6PHR2 472 aa3.2□□□□□ -1.9
CKS1BP1-201ENST00000555221 IGFL3Q6UXB1 125 aa3.2□□□□□ -1.9
CKS1BP1-201ENST00000555221 ARRDC1Q8N5I2 433 aa3.2□□□□□ -1.9
CKS1BP1-201ENST00000555221 OR10W1Q8NGF6 305 aa3.2□□□□□ -1.9
CKS1BP1-201ENST00000555221 ZNF461Q8TAF7 563 aa3.2□□□□□ -1.9
CKS1BP1-201ENST00000555221 RBMXL1Q96E39 390 aaKnown RBP3.2□□□□□ -1.9
CKS1BP1-201ENST00000555221 L3HYPDHQ96EM0 354 aa3.2□□□□□ -1.9
CKS1BP1-201ENST00000555221 CERS2Q96G23 380 aa3.2□□□□□ -1.9
CKS1BP1-201ENST00000555221 RSG1Q9BU20 258 aa3.2□□□□□ -1.9
CKS1BP1-201ENST00000555221 RGCCQ9H4X1 137 aa3.2□□□□□ -1.9
CKS1BP1-201ENST00000555221 DDX19BQ9UMR2 479 aa3.2□□□□□ -1.9
CKS1BP1-201ENST00000555221 IBTKQ9P2D0 1353 aaPredicted RBP3.2□□□□□ -1.9
CKS1BP1-201ENST00000555221 DOCK9Q9BZ29 2069 aa3.2□□□□□ -1.9
CKS1BP1-201ENST00000555221 ADGRA3Q8IWK6 1321 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms