RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 MXD1Q05195 221 aa9.32□□□□□ -0.92
SHMT2-218ENST00000555213 GK2Q14410 553 aaPredicted RBP9.32□□□□□ -0.92
SHMT2-218ENST00000555213 HLXQ14774 488 aaPredicted RBP9.32□□□□□ -0.92
SHMT2-218ENST00000555213 DGUOKQ16854 277 aa9.32□□□□□ -0.92
SHMT2-218ENST00000555213 MSMPQ1L6U9 139 aa9.32□□□□□ -0.92
SHMT2-218ENST00000555213 PCGF3Q3KNV8 242 aa9.32□□□□□ -0.92
SHMT2-218ENST00000555213 Q499Y3 187 aa9.32□□□□□ -0.92
SHMT2-218ENST00000555213 GLYATL3Q5SZD4 288 aa9.32□□□□□ -0.92
SHMT2-218ENST00000555213 LRRTM1Q86UE6 522 aa9.32□□□□□ -0.92
SHMT2-218ENST00000555213 LRP11Q86VZ4 500 aa9.32□□□□□ -0.92
SHMT2-218ENST00000555213 FTMTQ8N4E7 242 aa9.32□□□□□ -0.92
SHMT2-218ENST00000555213 ZNF676Q8N7Q3 588 aa9.32□□□□□ -0.92
SHMT2-218ENST00000555213 SLC25A46Q96AG3 418 aa9.32□□□□□ -0.92
SHMT2-218ENST00000555213 HAVCR1Q96D42 359 aa9.32□□□□□ -0.92
SHMT2-218ENST00000555213 REEP6Q96HR9 211 aa9.32□□□□□ -0.92
SHMT2-218ENST00000555213 DIRC2Q96SL1 478 aa9.32□□□□□ -0.92
SHMT2-218ENST00000555213 FOXC2Q99958 501 aa9.32□□□□□ -0.92
SHMT2-218ENST00000555213 TPK1Q9H3S4 243 aa9.32□□□□□ -0.92
SHMT2-218ENST00000555213 POFUT1Q9H488 388 aa9.32□□□□□ -0.92
SHMT2-218ENST00000555213 CCDC59Q9P031 241 aaKnown RBP9.32□□□□□ -0.92
SHMT2-218ENST00000555213 MYEF2Q9P2K5 600 aaKnown RBP9.32□□□□□ -0.92
SHMT2-218ENST00000555213 PURGQ9UJV8 347 aaKnown RBP9.32□□□□□ -0.92
SHMT2-218ENST00000555213 NOP16Q9Y3C1 178 aaKnown RBP9.32□□□□□ -0.92
SHMT2-218ENST00000555213 APCP25054 2843 aa9.32□□□□□ -0.92
SHMT2-218ENST00000555213 CELSR2Q9HCU4 2923 aa9.32□□□□□ -0.92
SHMT2-218ENST00000555213 CACNA1DQ01668 2161 aa9.31□□□□□ -0.92
SHMT2-218ENST00000555213 HRNRQ86YZ3 2850 aaPredicted RBP9.31□□□□□ -0.92
SHMT2-218ENST00000555213 ITPR2Q14571 2701 aa9.31□□□□□ -0.92
SHMT2-218ENST00000555213 FBN2P35556 2912 aa9.31□□□□□ -0.92
SHMT2-218ENST00000555213 A0A075B6Q4 140 aa9.31□□□□□ -0.92
SHMT2-218ENST00000555213 TRAV8-7A0A075B6U6 113 aa9.31□□□□□ -0.92
SHMT2-218ENST00000555213 SMIM30A4D0T7 59 aa9.31□□□□□ -0.92
SHMT2-218ENST00000555213 CLPXO76031 633 aa9.31□□□□□ -0.92
SHMT2-218ENST00000555213 IGFBP3P17936 291 aaPredicted RBP9.31□□□□□ -0.92
SHMT2-218ENST00000555213 ACHEP22303 614 aa9.31□□□□□ -0.92
SHMT2-218ENST00000555213 TNFSF4P23510 183 aa9.31□□□□□ -0.92
SHMT2-218ENST00000555213 CALRP27797 417 aaKnown RBP9.31□□□□□ -0.92
SHMT2-218ENST00000555213 THBS2P35442 1172 aa9.31□□□□□ -0.92
SHMT2-218ENST00000555213 SOX2P48431 317 aa9.31□□□□□ -0.92
SHMT2-218ENST00000555213 ZNF81P51508 661 aa9.31□□□□□ -0.92
SHMT2-218ENST00000555213 EFNA4P52798 201 aa9.31□□□□□ -0.92
SHMT2-218ENST00000555213 ART1P52961 327 aa9.31□□□□□ -0.92
SHMT2-218ENST00000555213 OR10A3P58181 314 aa9.31□□□□□ -0.92
SHMT2-218ENST00000555213 ZNF92Q03936 586 aa9.31□□□□□ -0.92
SHMT2-218ENST00000555213 PSG7Q13046 419 aa9.31□□□□□ -0.92
SHMT2-218ENST00000555213 TNK1Q13470 666 aa9.31□□□□□ -0.92
SHMT2-218ENST00000555213 ALKBH6Q3KRA9 238 aa9.31□□□□□ -0.92
SHMT2-218ENST00000555213 FAM209AQ5JX71 171 aa9.31□□□□□ -0.92
SHMT2-218ENST00000555213 TMEM244Q5VVB8 128 aa9.31□□□□□ -0.92
SHMT2-218ENST00000555213 OR2T2Q6IF00 324 aa9.31□□□□□ -0.92
SHMT2-218ENST00000555213 LYPD6Q86Y78 171 aa9.31□□□□□ -0.92
SHMT2-218ENST00000555213 OR6Q1Q8NGQ2 317 aa9.31□□□□□ -0.92
SHMT2-218ENST00000555213 OR2AE1Q8NHA4 323 aa9.31□□□□□ -0.92
SHMT2-218ENST00000555213 OR51E1Q8TCB6 317 aa9.31□□□□□ -0.92
SHMT2-218ENST00000555213 GPR148Q8TDV2 347 aa9.31□□□□□ -0.92
SHMT2-218ENST00000555213 NEU4Q8WWR8 484 aaPredicted RBP9.31□□□□□ -0.92
SHMT2-218ENST00000555213 ITFG2Q969R8 447 aa9.31□□□□□ -0.92
SHMT2-218ENST00000555213 TSC22D3Q99576 134 aa9.31□□□□□ -0.92
SHMT2-218ENST00000555213 SLC22A4Q9H015 551 aa9.31□□□□□ -0.92
SHMT2-218ENST00000555213 MYOZ1Q9NP98 299 aaPredicted RBP9.31□□□□□ -0.92
SHMT2-218ENST00000555213 ZNF275Q9NSD4 429 aaPredicted RBP9.31□□□□□ -0.92
SHMT2-218ENST00000555213 ZDHHC8Q9ULC8 765 aa9.31□□□□□ -0.92
SHMT2-218ENST00000555213 A3GALT2U3KPV4 340 aa9.31□□□□□ -0.92
SHMT2-218ENST00000555213 CRYBG3Q68DQ2 2970 aa9.31□□□□□ -0.92
SHMT2-218ENST00000555213 A0A0U1RQV5 110 aa9.3□□□□□ -0.92
SHMT2-218ENST00000555213 LOC107986453A0A1B0GWG9 222 aa9.3□□□□□ -0.92
SHMT2-218ENST00000555213 C17orf100A8MU93 164 aa9.3□□□□□ -0.92
SHMT2-218ENST00000555213 IQCF6A8MYZ5 107 aa9.3□□□□□ -0.92
SHMT2-218ENST00000555213 CTDSP2O14595 271 aa9.3□□□□□ -0.92
SHMT2-218ENST00000555213 TPD52L2O43399 206 aaKnown RBP9.3□□□□□ -0.92
SHMT2-218ENST00000555213 CSF3P09919 207 aa9.3□□□□□ -0.92
SHMT2-218ENST00000555213 OCM2P0CE71 109 aa9.3□□□□□ -0.92
SHMT2-218ENST00000555213 NAT2P11245 290 aa9.3□□□□□ -0.92
SHMT2-218ENST00000555213 DDOSTP39656 456 aa9.3□□□□□ -0.92
SHMT2-218ENST00000555213 RORCP51449 518 aa9.3□□□□□ -0.92
SHMT2-218ENST00000555213 BMXP51813 675 aa9.3□□□□□ -0.92
SHMT2-218ENST00000555213 ZNF404Q494X3 552 aa9.3□□□□□ -0.92
SHMT2-218ENST00000555213 Q5PR19 223 aa9.3□□□□□ -0.92
SHMT2-218ENST00000555213 SHEQ5VZ18 495 aa9.3□□□□□ -0.92
SHMT2-218ENST00000555213 ZNF529Q6P280 563 aa9.3□□□□□ -0.92
SHMT2-218ENST00000555213 TPRA1Q86W33 373 aa9.3□□□□□ -0.92
SHMT2-218ENST00000555213 OR5AS1Q8N127 324 aa9.3□□□□□ -0.92
SHMT2-218ENST00000555213 BHLHE23Q8NDY6 225 aa9.3□□□□□ -0.92
SHMT2-218ENST00000555213 CSNK2A3Q8NEV1 391 aa9.3□□□□□ -0.92
SHMT2-218ENST00000555213 OR8G5Q8NG78 346 aa9.3□□□□□ -0.92
SHMT2-218ENST00000555213 OR14K1Q8NGZ2 314 aa9.3□□□□□ -0.92
SHMT2-218ENST00000555213 SPSB4Q96A44 273 aa9.3□□□□□ -0.92
SHMT2-218ENST00000555213 ADAT3Q96EY9 351 aaPredicted RBP9.3□□□□□ -0.92
SHMT2-218ENST00000555213 SORCS2Q96PQ0 1159 aa9.3□□□□□ -0.92
SHMT2-218ENST00000555213 REPIN1Q9BWE0 567 aaKnown RBP9.3□□□□□ -0.92
SHMT2-218ENST00000555213 EGLN1Q9GZT9 426 aa9.3□□□□□ -0.92
SHMT2-218ENST00000555213 COMMD4Q9H0A8 199 aa9.3□□□□□ -0.92
SHMT2-218ENST00000555213 MMP27Q9H306 513 aa9.3□□□□□ -0.92
SHMT2-218ENST00000555213 GPR84Q9NQS5 396 aa9.3□□□□□ -0.92
SHMT2-218ENST00000555213 DECR2Q9NUI1 292 aa9.3□□□□□ -0.92
SHMT2-218ENST00000555213 ITGB1BP2Q9UKP3 347 aa9.3□□□□□ -0.92
SHMT2-218ENST00000555213 HHLA2Q9UM44 414 aa9.3□□□□□ -0.92
SHMT2-218ENST00000555213 AK6Q9Y3D8 172 aaKnown RBP9.3□□□□□ -0.92
SHMT2-218ENST00000555213 DSCAMO60469 2012 aa9.3□□□□□ -0.92
SHMT2-218ENST00000555213 CCDC168Q8NDH2 2452 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms