RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 SLCO4A1Q96BD0 722 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 PKNOX2Q96KN3 472 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 CCL13Q99616 98 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 COQ7Q99807 217 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 MCRIP2Q9BUT9 160 aaKnown RBP3.88□□□□□ -1.79
ATXN3-229ENST00000554672 PRSS22Q9GZN4 317 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 WDR76Q9H967 626 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 C1orf123Q9NWV4 160 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 SLC25A37Q9NYZ2 338 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 NKX1-2Q9UD57 310 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-229ENST00000554672 PRPF19Q9UMS4 504 aaKnown RBP3.88□□□□□ -1.79
ATXN3-229ENST00000554672 CORO2BQ9UQ03 480 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 MED31Q9Y3C7 131 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 TSSC4Q9Y5U2 329 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-229ENST00000554672 CAPN7Q9Y6W3 813 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 TET2Q6N021 2002 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-229ENST00000554672 IGHV3OR15-7A0A075B7D8 119 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 TEX13CA0A0J9YWL9 993 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 hCG_1807616A0A1W2PRN6 198 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 CD300LBA8K4G0 201 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 H3BUI4 141 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 XKRYO14609 159 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 RER1O15258 196 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 RAMP3O60896 148 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 KHDRBS3O75525 346 aaKnown RBP3.87□□□□□ -1.79
ATXN3-229ENST00000554672 GLCEO94923 617 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 OR5F1O95221 314 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 LCATP04180 440 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 IFNW1P05000 195 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 CD1AP06126 327 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 GRPP07492 148 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 LYL1P12980 280 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 CTLA4P16410 223 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 POU1F1P28069 291 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 NAA10P41227 235 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-229ENST00000554672 GSK3BP49841 420 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 BMXP51813 675 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 DLX1P56177 255 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 TAS2R41P59536 307 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 HIST1H3AP68431 136 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 HABP2Q14520 560 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-229ENST00000554672 RSPO1Q2MKA7 263 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-229ENST00000554672 HIST2H3PS2Q5TEC6 136 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 ZNF826PQ6ZT77 177 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 HIST2H3AQ71DI3 136 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 MEPCEQ7L2J0 689 aaKnown RBP3.87□□□□□ -1.79
ATXN3-229ENST00000554672 PIGWQ7Z7B1 504 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 CENPVQ7Z7K6 275 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-229ENST00000554672 CROCCP2Q86T23 111 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 PATL1Q86TB9 770 aaKnown RBP3.87□□□□□ -1.79
ATXN3-229ENST00000554672 FGFRL1Q8N441 504 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 LRRC75AQ8NAA5 344 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 C11orf65Q8NCR3 313 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 OR9Q1Q8NGQ5 310 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 OR9I1Q8NGQ6 314 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 OR51A7Q8NH64 312 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 SLC26A7Q8TE54 656 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 TMEM255BQ8WV15 326 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 C17orf50Q8WW18 174 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 RASSF5Q8WWW0 418 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 C12orf43Q96C57 262 aaKnown RBP3.87□□□□□ -1.79
ATXN3-229ENST00000554672 DUS3LQ96G46 650 aaKnown RBP3.87□□□□□ -1.79
ATXN3-229ENST00000554672 MED30Q96HR3 178 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 OR5M11Q96RB7 305 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 POLR2J2Q9GZM3 115 aaKnown RBP3.87□□□□□ -1.79
ATXN3-229ENST00000554672 HDHD2Q9H0R4 259 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 POLR2J3Q9H1A7 115 aaKnown RBP3.87□□□□□ -1.79
ATXN3-229ENST00000554672 HEXA-AS1Q9H8Q6 139 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 RNPEPL1Q9HAU8 725 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 PALMDQ9NP74 551 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 MRPS18AQ9NVS2 196 aaKnown RBP3.87□□□□□ -1.79
ATXN3-229ENST00000554672 MRPL15Q9P015 296 aaKnown RBP3.87□□□□□ -1.79
ATXN3-229ENST00000554672 VAPAQ9P0L0 249 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 GRHPRQ9UBQ7 328 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 RIMS3Q9UJD0 308 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 NDUFAF1Q9Y375 327 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 DNAH3Q8TD57 4116 aa3.87□□□□□ -1.79
ATXN3-229ENST00000554672 TENM2Q9NT68 2774 aa3.86□□□□□ -1.79
ATXN3-229ENST00000554672 SACSQ9NZJ4 4579 aa3.86□□□□□ -1.79
ATXN3-229ENST00000554672 TRBV5-3A0A0A0MS03 114 aa3.86□□□□□ -1.79
ATXN3-229ENST00000554672 A0A1B0GW55 424 aa3.86□□□□□ -1.79
ATXN3-229ENST00000554672 PRSS37A4D1T9 235 aa3.86□□□□□ -1.79
ATXN3-229ENST00000554672 A6NDX4 124 aa3.86□□□□□ -1.79
ATXN3-229ENST00000554672 GGT3PA6NGU5 568 aa3.86□□□□□ -1.79
ATXN3-229ENST00000554672 PRSS29PA6NIE9 313 aa3.86□□□□□ -1.79
ATXN3-229ENST00000554672 A6NLC8 198 aa3.86□□□□□ -1.79
ATXN3-229ENST00000554672 VGLL3A8MV65 326 aa3.86□□□□□ -1.79
ATXN3-229ENST00000554672 F5H5K5 113 aa3.86□□□□□ -1.79
ATXN3-229ENST00000554672 H0YAE9 185 aa3.86□□□□□ -1.79
ATXN3-229ENST00000554672 H7C1C5 153 aa3.86□□□□□ -1.79
ATXN3-229ENST00000554672 ACOT8O14734 319 aa3.86□□□□□ -1.79
ATXN3-229ENST00000554672 SYNGR1O43759 233 aa3.86□□□□□ -1.79
ATXN3-229ENST00000554672 SLC16A7O60669 478 aa3.86□□□□□ -1.79
ATXN3-229ENST00000554672 CD14P08571 375 aa3.86□□□□□ -1.79
ATXN3-229ENST00000554672 ACSM4P0C7M7 580 aa3.86□□□□□ -1.79
ATXN3-229ENST00000554672 DUX4L2P0CJ85 424 aa3.86□□□□□ -1.79
ATXN3-229ENST00000554672 DUX4L3P0CJ86 424 aa3.86□□□□□ -1.79
ATXN3-229ENST00000554672 DUX4L4P0CJ87 422 aa3.86□□□□□ -1.79
ATXN3-229ENST00000554672 DUX4L5P0CJ88 424 aa3.86□□□□□ -1.79
ATXN3-229ENST00000554672 DUX4L6P0CJ89 424 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms