RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 TRBV5-7A0A0A0MS05 114 aa10.67□□□□□ -0.7
SHMT2-214ENST00000554604 A0A1W2PQ09 198 aa10.67□□□□□ -0.7
SHMT2-214ENST00000554604 FAM25AB3EWG3 89 aa10.67□□□□□ -0.7
SHMT2-214ENST00000554604 FAM25CB3EWG5 89 aa10.67□□□□□ -0.7
SHMT2-214ENST00000554604 FAM25GB3EWG6 89 aa10.67□□□□□ -0.7
SHMT2-214ENST00000554604 CD5LO43866 347 aa10.67□□□□□ -0.7
SHMT2-214ENST00000554604 ZNF35P13682 527 aa10.67□□□□□ -0.7
SHMT2-214ENST00000554604 TALDO1P37837 337 aa10.67□□□□□ -0.7
SHMT2-214ENST00000554604 GUCA1AP43080 201 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-214ENST00000554604 KIR3DL2P43630 455 aa10.67□□□□□ -0.7
SHMT2-214ENST00000554604 RIDAP52758 137 aaKnown RBP10.67□□□□□ -0.7
SHMT2-214ENST00000554604 PLP2Q04941 152 aa10.67□□□□□ -0.7
SHMT2-214ENST00000554604 LOXL1Q08397 574 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-214ENST00000554604 TMEM249Q2WGJ8 235 aa10.67□□□□□ -0.7
SHMT2-214ENST00000554604 NRN1LQ496H8 165 aa10.67□□□□□ -0.7
SHMT2-214ENST00000554604 DEGS2Q6QHC5 323 aa10.67□□□□□ -0.7
SHMT2-214ENST00000554604 CCBE1Q6UXH8 406 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-214ENST00000554604 KRT77Q7Z794 578 aa10.67□□□□□ -0.7
SHMT2-214ENST00000554604 GLB1L2Q8IW92 636 aa10.67□□□□□ -0.7
SHMT2-214ENST00000554604 LRRC18Q8N456 261 aa10.67□□□□□ -0.7
SHMT2-214ENST00000554604 SLC30A7Q8NEW0 376 aa10.67□□□□□ -0.7
SHMT2-214ENST00000554604 FGFBP3Q8TAT2 258 aa10.67□□□□□ -0.7
SHMT2-214ENST00000554604 TRMT10AQ8TBZ6 339 aaKnown RBP10.67□□□□□ -0.7
SHMT2-214ENST00000554604 KCNJ15Q99712 375 aa10.67□□□□□ -0.7
SHMT2-214ENST00000554604 SLITRK2Q9H156 845 aa10.67□□□□□ -0.7
SHMT2-214ENST00000554604 C1orf198Q9H425 327 aa10.67□□□□□ -0.7
SHMT2-214ENST00000554604 ELOVL3Q9HB03 270 aa10.67□□□□□ -0.7
SHMT2-214ENST00000554604 CDH20Q9HBT6 801 aa10.67□□□□□ -0.7
SHMT2-214ENST00000554604 MYOZ1Q9NP98 299 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-214ENST00000554604 RHBDL2Q9NX52 303 aa10.67□□□□□ -0.7
SHMT2-214ENST00000554604 RABL2AQ9UBK7 228 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-214ENST00000554604 EXTL2Q9UBQ6 330 aa10.67□□□□□ -0.7
SHMT2-214ENST00000554604 RABL2BQ9UNT1 228 aa10.67□□□□□ -0.7
SHMT2-214ENST00000554604 A0A1W2PPK0 400 aa10.66□□□□□ -0.7
SHMT2-214ENST00000554604 LOC390937A0A1W2PQ73 354 aa10.66□□□□□ -0.7
SHMT2-214ENST00000554604 ACOD1A6NK06 481 aa10.66□□□□□ -0.7
SHMT2-214ENST00000554604 NDUFS8O00217 210 aa10.66□□□□□ -0.7
SHMT2-214ENST00000554604 SYNGR3O43761 229 aa10.66□□□□□ -0.7
SHMT2-214ENST00000554604 SLC2A2P11168 524 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-214ENST00000554604 SPNP16150 400 aa10.66□□□□□ -0.7
SHMT2-214ENST00000554604 ATF1P18846 271 aa10.66□□□□□ -0.7
SHMT2-214ENST00000554604 USF1P22415 310 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-214ENST00000554604 GLRXP35754 106 aa10.66□□□□□ -0.7
SHMT2-214ENST00000554604 RPS27P42677 84 aaKnown RBP10.66□□□□□ -0.7
SHMT2-214ENST00000554604 FMODQ06828 376 aa10.66□□□□□ -0.7
SHMT2-214ENST00000554604 IL18Q14116 193 aa10.66□□□□□ -0.7
SHMT2-214ENST00000554604 P2RY14Q15391 338 aa10.66□□□□□ -0.7
SHMT2-214ENST00000554604 SGCAQ16586 387 aa10.66□□□□□ -0.7
SHMT2-214ENST00000554604 WDR38Q5JTN6 314 aa10.66□□□□□ -0.7
SHMT2-214ENST00000554604 C10orf128Q5T292 105 aa10.66□□□□□ -0.7
SHMT2-214ENST00000554604 SLC25A47Q6Q0C1 308 aa10.66□□□□□ -0.7
SHMT2-214ENST00000554604 LRRN1Q6UXK5 716 aa10.66□□□□□ -0.7
SHMT2-214ENST00000554604 BAIAP2L2Q6UXY1 529 aa10.66□□□□□ -0.7
SHMT2-214ENST00000554604 ZNF584Q8IVC4 421 aa10.66□□□□□ -0.7
SHMT2-214ENST00000554604 ZCCHC24Q8N2G6 241 aaKnown RBP10.66□□□□□ -0.7
SHMT2-214ENST00000554604 PRSS35Q8N3Z0 413 aa10.66□□□□□ -0.7
SHMT2-214ENST00000554604 ZNF676Q8N7Q3 588 aa10.66□□□□□ -0.7
SHMT2-214ENST00000554604 SAMD12Q8N8I0 201 aa10.66□□□□□ -0.7
SHMT2-214ENST00000554604 OR1J2Q8NGS2 313 aa10.66□□□□□ -0.7
SHMT2-214ENST00000554604 GPR148Q8TDV2 347 aa10.66□□□□□ -0.7
SHMT2-214ENST00000554604 ST7LQ8TDW4 575 aa10.66□□□□□ -0.7
SHMT2-214ENST00000554604 NEU4Q8WWR8 484 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-214ENST00000554604 MRPL24Q96A35 216 aaKnown RBP10.66□□□□□ -0.7
SHMT2-214ENST00000554604 FOXN4Q96NZ1 517 aa10.66□□□□□ -0.7
SHMT2-214ENST00000554604 SPATA2Q9UM82 520 aa10.66□□□□□ -0.7
SHMT2-214ENST00000554604 A0A096LNT2 108 aa10.65□□□□□ -0.7
SHMT2-214ENST00000554604 IGKV1D-43A0A0B4J1Z2 117 aa10.65□□□□□ -0.7
SHMT2-214ENST00000554604 A8MV72 311 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-214ENST00000554604 M0R233 179 aa10.65□□□□□ -0.7
SHMT2-214ENST00000554604 CRLF1O75462 422 aa10.65□□□□□ -0.7
SHMT2-214ENST00000554604 SRSF10O75494 262 aaKnown RBP10.65□□□□□ -0.7
SHMT2-214ENST00000554604 EIF4EP06730 217 aaKnown RBP10.65□□□□□ -0.7
SHMT2-214ENST00000554604 HNRNPCP07910 306 aaKnown RBP eCLIP10.65□□□□□ -0.7
SHMT2-214ENST00000554604 DAOP14920 347 aa10.65□□□□□ -0.7
SHMT2-214ENST00000554604 LAP3P28838 519 aa10.65□□□□□ -0.7
SHMT2-214ENST00000554604 CDAP32320 146 aa10.65□□□□□ -0.7
SHMT2-214ENST00000554604 DCTDP32321 178 aa10.65□□□□□ -0.7
SHMT2-214ENST00000554604 NR4A2P43354 598 aa10.65□□□□□ -0.7
SHMT2-214ENST00000554604 SELENOVP59797 346 aa10.65□□□□□ -0.7
SHMT2-214ENST00000554604 MRPS34P82930 218 aaKnown RBP10.65□□□□□ -0.7
SHMT2-214ENST00000554604 KCNMB1Q16558 191 aa10.65□□□□□ -0.7
SHMT2-214ENST00000554604 TBC1D28Q2M2D7 210 aa10.65□□□□□ -0.7
SHMT2-214ENST00000554604 HACD4Q5VWC8 232 aa10.65□□□□□ -0.7
SHMT2-214ENST00000554604 TRIQKQ629K1 86 aa10.65□□□□□ -0.7
SHMT2-214ENST00000554604 PYHIN1Q6K0P9 492 aa10.65□□□□□ -0.7
SHMT2-214ENST00000554604 CATSPERDQ86XM0 798 aa10.65□□□□□ -0.7
SHMT2-214ENST00000554604 CADM3Q8N126 398 aa10.65□□□□□ -0.7
SHMT2-214ENST00000554604 Q8N402 240 aa10.65□□□□□ -0.7
SHMT2-214ENST00000554604 DRAXINQ8NBI3 349 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-214ENST00000554604 OR4M1Q8NGD0 313 aa10.65□□□□□ -0.7
SHMT2-214ENST00000554604 CHAC2Q8WUX2 184 aa10.65□□□□□ -0.7
SHMT2-214ENST00000554604 GFI1Q99684 422 aa10.65□□□□□ -0.7
SHMT2-214ENST00000554604 SYT3Q9BQG1 590 aa10.65□□□□□ -0.7
SHMT2-214ENST00000554604 NEURL2Q9BR09 285 aa10.65□□□□□ -0.7
SHMT2-214ENST00000554604 MRPL37Q9BZE1 423 aaKnown RBP10.65□□□□□ -0.7
SHMT2-214ENST00000554604 SLC22A4Q9H015 551 aa10.65□□□□□ -0.7
SHMT2-214ENST00000554604 OR51B6Q9H340 312 aa10.65□□□□□ -0.7
SHMT2-214ENST00000554604 MS4A5Q9H3V2 200 aa10.65□□□□□ -0.7
SHMT2-214ENST00000554604 TCF7L1Q9HCS4 588 aa10.65□□□□□ -0.7
SHMT2-214ENST00000554604 DUSP13Q9UII6 198 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms