RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 M0R233 179 aa12.41□□□□□ -0.42
SHMT2-210ENST00000553950 PIN1P1O15428 100 aa12.41□□□□□ -0.42
SHMT2-210ENST00000553950 CLDN1O95832 211 aa12.41□□□□□ -0.42
SHMT2-210ENST00000553950 ALDOBP05062 364 aa12.41□□□□□ -0.42
SHMT2-210ENST00000553950 HCKP08631 526 aa12.41□□□□□ -0.42
SHMT2-210ENST00000553950 ATF1P18846 271 aa12.41□□□□□ -0.42
SHMT2-210ENST00000553950 RAB3BP20337 219 aa12.41□□□□□ -0.42
SHMT2-210ENST00000553950 TNFSF4P23510 183 aa12.41□□□□□ -0.42
SHMT2-210ENST00000553950 SOX6P35712 828 aa12.41□□□□□ -0.42
SHMT2-210ENST00000553950 TLE4Q04727 773 aa12.41□□□□□ -0.42
SHMT2-210ENST00000553950 TNK1Q13470 666 aa12.41□□□□□ -0.42
SHMT2-210ENST00000553950 INSL4Q14641 139 aa12.41□□□□□ -0.42
SHMT2-210ENST00000553950 OR8G1Q15617 311 aa12.41□□□□□ -0.42
SHMT2-210ENST00000553950 FAM209AQ5JX71 171 aa12.41□□□□□ -0.42
SHMT2-210ENST00000553950 FAM27D1Q5T7N8 215 aa12.41□□□□□ -0.42
SHMT2-210ENST00000553950 OR5AS1Q8N127 324 aa12.41□□□□□ -0.42
SHMT2-210ENST00000553950 PIGCQ92535 297 aa12.41□□□□□ -0.42
SHMT2-210ENST00000553950 BORCS8Q96FH0 119 aa12.41□□□□□ -0.42
SHMT2-210ENST00000553950 HS3ST6Q96QI5 342 aa12.41□□□□□ -0.42
SHMT2-210ENST00000553950 SYT3Q9BQG1 590 aa12.41□□□□□ -0.42
SHMT2-210ENST00000553950 SOX7Q9BT81 388 aa12.41□□□□□ -0.42
SHMT2-210ENST00000553950 MRI1Q9BV20 369 aa12.41□□□□□ -0.42
SHMT2-210ENST00000553950 MRPL37Q9BZE1 423 aaKnown RBP12.41□□□□□ -0.42
SHMT2-210ENST00000553950 DCSTAMPQ9H295 470 aa12.41□□□□□ -0.42
SHMT2-210ENST00000553950 DYNLRB1Q9NP97 96 aa12.41□□□□□ -0.42
SHMT2-210ENST00000553950 C14orf119Q9NWQ9 140 aa12.41□□□□□ -0.42
SHMT2-210ENST00000553950 ZDHHC8Q9ULC8 765 aa12.41□□□□□ -0.42
SHMT2-210ENST00000553950 PKDREJQ9NTG1 2253 aa12.4□□□□□ -0.42
SHMT2-210ENST00000553950 A0A1B0GWJ7 208 aa12.4□□□□□ -0.42
SHMT2-210ENST00000553950 A0A1W2PPK0 400 aa12.4□□□□□ -0.42
SHMT2-210ENST00000553950 A1L4Q6 167 aa12.4□□□□□ -0.42
SHMT2-210ENST00000553950 LMX1BO60663 402 aa12.4□□□□□ -0.42
SHMT2-210ENST00000553950 PRF1P14222 555 aa12.4□□□□□ -0.42
SHMT2-210ENST00000553950 AZGP1P25311 298 aaKnown RBP12.4□□□□□ -0.42
SHMT2-210ENST00000553950 FUT6P51993 359 aa12.4□□□□□ -0.42
SHMT2-210ENST00000553950 CEACAM21Q3KPI0 293 aa12.4□□□□□ -0.42
SHMT2-210ENST00000553950 CEP78Q5JTW2 689 aa12.4□□□□□ -0.42
SHMT2-210ENST00000553950 DDI2Q5TDH0 399 aa12.4□□□□□ -0.42
SHMT2-210ENST00000553950 AGAP6Q5VW22 663 aa12.4□□□□□ -0.42
SHMT2-210ENST00000553950 MUC15Q8N387 334 aa12.4□□□□□ -0.42
SHMT2-210ENST00000553950 OR5A2Q8NGI9 324 aa12.4□□□□□ -0.42
SHMT2-210ENST00000553950 AP3S1Q92572 193 aa12.4□□□□□ -0.42
SHMT2-210ENST00000553950 UQCC2Q9BRT2 126 aa12.4□□□□□ -0.42
SHMT2-210ENST00000553950 METTL17Q9H7H0 456 aaPredicted RBP12.4□□□□□ -0.42
SHMT2-210ENST00000553950 CCDC59Q9P031 241 aaKnown RBP12.4□□□□□ -0.42
SHMT2-210ENST00000553950 TAAR3PQ9P1P4 343 aa12.4□□□□□ -0.42
SHMT2-210ENST00000553950 RHBDD3Q9Y3P4 386 aa12.4□□□□□ -0.42
SHMT2-210ENST00000553950 ADGRG4Q8IZF6 3080 aa12.4□□□□□ -0.42
SHMT2-210ENST00000553950 ABCA4P78363 2273 aa12.4□□□□□ -0.42
SHMT2-210ENST00000553950 FLNCQ14315 2725 aa12.39□□□□□ -0.43
SHMT2-210ENST00000553950 TRAV8-7A0A075B6U6 113 aa12.39□□□□□ -0.43
SHMT2-210ENST00000553950 FAM221AA4D161 298 aa12.39□□□□□ -0.43
SHMT2-210ENST00000553950 ZNF850A8MQ14 1090 aa12.39□□□□□ -0.43
SHMT2-210ENST00000553950 NOTOA8MTQ0 251 aa12.39□□□□□ -0.43
SHMT2-210ENST00000553950 CDRT1O95170 752 aa12.39□□□□□ -0.43
SHMT2-210ENST00000553950 MAS1P04201 325 aa12.39□□□□□ -0.43
SHMT2-210ENST00000553950 ADH4P08319 380 aa12.39□□□□□ -0.43
SHMT2-210ENST00000553950 CFPP27918 469 aa12.39□□□□□ -0.43
SHMT2-210ENST00000553950 SDC2P34741 201 aa12.39□□□□□ -0.43
SHMT2-210ENST00000553950 RBP2P50120 134 aa12.39□□□□□ -0.43
SHMT2-210ENST00000553950 ZNF81P51508 661 aa12.39□□□□□ -0.43
SHMT2-210ENST00000553950 ATP1B3P54709 279 aa12.39□□□□□ -0.43
SHMT2-210ENST00000553950 GNG3P63215 75 aa12.39□□□□□ -0.43
SHMT2-210ENST00000553950 PCGF3Q3KNV8 242 aa12.39□□□□□ -0.43
SHMT2-210ENST00000553950 C20orf204Q6ZNR8 217 aa12.39□□□□□ -0.43
SHMT2-210ENST00000553950 MOB3CQ70IA8 216 aa12.39□□□□□ -0.43
SHMT2-210ENST00000553950 CELF2-AS1Q8N7Q2 184 aa12.39□□□□□ -0.43
SHMT2-210ENST00000553950 ZNF611Q8N823 705 aa12.39□□□□□ -0.43
SHMT2-210ENST00000553950 ITPKCQ96DU7 683 aa12.39□□□□□ -0.43
SHMT2-210ENST00000553950 C14orf79Q96F83 325 aa12.39□□□□□ -0.43
SHMT2-210ENST00000553950 SORCS2Q96PQ0 1159 aa12.39□□□□□ -0.43
SHMT2-210ENST00000553950 CXXC4Q9H2H0 198 aa12.39□□□□□ -0.43
SHMT2-210ENST00000553950 MS4A5Q9H3V2 200 aa12.39□□□□□ -0.43
SHMT2-210ENST00000553950 GPR173Q9NS66 373 aa12.39□□□□□ -0.43
SHMT2-210ENST00000553950 CBLN4Q9NTU7 201 aa12.39□□□□□ -0.43
SHMT2-210ENST00000553950 FZR1Q9UM11 496 aa12.39□□□□□ -0.43
SHMT2-210ENST00000553950 V9GY05 133 aa12.39□□□□□ -0.43
SHMT2-210ENST00000553950 SPTAN1Q13813 2472 aaKnown RBP12.39□□□□□ -0.43
SHMT2-210ENST00000553950 ICE1Q9Y2F5 2266 aa12.38□□□□□ -0.43
SHMT2-210ENST00000553950 CA6P23280 308 aa12.38□□□□□ -0.43
SHMT2-210ENST00000553950 MAGEB1P43366 347 aa12.38□□□□□ -0.43
SHMT2-210ENST00000553950 SRP9P49458 86 aaKnown RBP12.38□□□□□ -0.43
SHMT2-210ENST00000553950 PPOXP50336 477 aa12.38□□□□□ -0.43
SHMT2-210ENST00000553950 RORCP51449 518 aa12.38□□□□□ -0.43
SHMT2-210ENST00000553950 MMP15P51511 669 aa12.38□□□□□ -0.43
SHMT2-210ENST00000553950 PRSS12P56730 875 aa12.38□□□□□ -0.43
SHMT2-210ENST00000553950 SCAND1P57086 179 aa12.38□□□□□ -0.43
SHMT2-210ENST00000553950 DYNC1I2Q13409 638 aaKnown RBP12.38□□□□□ -0.43
SHMT2-210ENST00000553950 RIN1Q13671 783 aa12.38□□□□□ -0.43
SHMT2-210ENST00000553950 UBE2V2Q15819 145 aa12.38□□□□□ -0.43
SHMT2-210ENST00000553950 SP5Q6BEB4 398 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-210ENST00000553950 LRRTM1Q86UE6 522 aa12.38□□□□□ -0.43
SHMT2-210ENST00000553950 ZNF573Q86YE8 665 aa12.38□□□□□ -0.43
SHMT2-210ENST00000553950 JAGN1Q8N5M9 183 aa12.38□□□□□ -0.43
SHMT2-210ENST00000553950 OR6M1Q8NGM8 313 aa12.38□□□□□ -0.43
SHMT2-210ENST00000553950 NDNFQ8TB73 568 aa12.38□□□□□ -0.43
SHMT2-210ENST00000553950 OR5P3Q8WZ94 311 aa12.38□□□□□ -0.43
SHMT2-210ENST00000553950 SLC25A46Q96AG3 418 aa12.38□□□□□ -0.43
SHMT2-210ENST00000553950 KCTD12Q96CX2 325 aaKnown RBP12.38□□□□□ -0.43
SHMT2-210ENST00000553950 ELMOD3Q96FG2 381 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms