RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 MOB3CQ70IA8 216 aa10.39□□□□□ -0.75
SHMT2-209ENST00000553949 PARP16Q8N5Y8 322 aa10.39□□□□□ -0.75
SHMT2-209ENST00000553949 SPERTQ8NA61 448 aa10.39□□□□□ -0.75
SHMT2-209ENST00000553949 OR8S1Q8NH09 359 aa10.39□□□□□ -0.75
SHMT2-209ENST00000553949 HPSE2Q8WWQ2 592 aa10.39□□□□□ -0.75
SHMT2-209ENST00000553949 PP6455Q8WZ26 134 aa10.39□□□□□ -0.75
SHMT2-209ENST00000553949 OR5P3Q8WZ94 311 aa10.39□□□□□ -0.75
SHMT2-209ENST00000553949 TMEM203Q969S6 136 aa10.39□□□□□ -0.75
SHMT2-209ENST00000553949 ITPKCQ96DU7 683 aa10.39□□□□□ -0.75
SHMT2-209ENST00000553949 PERPQ96FX8 193 aa10.39□□□□□ -0.75
SHMT2-209ENST00000553949 OR2V2Q96R30 315 aa10.39□□□□□ -0.75
SHMT2-209ENST00000553949 OR14A2Q96R54 314 aa10.39□□□□□ -0.75
SHMT2-209ENST00000553949 MICU1Q9BPX6 476 aa10.39□□□□□ -0.75
SHMT2-209ENST00000553949 GSX2Q9BZM3 304 aa10.39□□□□□ -0.75
SHMT2-209ENST00000553949 EGLN1Q9GZT9 426 aa10.39□□□□□ -0.75
SHMT2-209ENST00000553949 CXXC4Q9H2H0 198 aa10.39□□□□□ -0.75
SHMT2-209ENST00000553949 GPR173Q9NS66 373 aa10.39□□□□□ -0.75
SHMT2-209ENST00000553949 NDUFB11Q9NX14 153 aa10.39□□□□□ -0.75
SHMT2-209ENST00000553949 IL19Q9UHD0 177 aa10.39□□□□□ -0.75
SHMT2-209ENST00000553949 SF3B6Q9Y3B4 125 aaKnown RBP10.39□□□□□ -0.75
SHMT2-209ENST00000553949 AKAP6Q13023 2319 aa10.39□□□□□ -0.75
SHMT2-209ENST00000553949 SPG11Q96JI7 2443 aa10.38□□□□□ -0.75
SHMT2-209ENST00000553949 ZNF879B4DU55 563 aa10.38□□□□□ -0.75
SHMT2-209ENST00000553949 CCRL2O00421 344 aa10.38□□□□□ -0.75
SHMT2-209ENST00000553949 TPD52L2O43399 206 aaKnown RBP10.38□□□□□ -0.75
SHMT2-209ENST00000553949 GATBO75879 557 aaKnown RBP10.38□□□□□ -0.75
SHMT2-209ENST00000553949 F12P00748 615 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-209ENST00000553949 HPXP02790 462 aa10.38□□□□□ -0.75
SHMT2-209ENST00000553949 CD2P06729 351 aa10.38□□□□□ -0.75
SHMT2-209ENST00000553949 JUNBP17275 347 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-209ENST00000553949 PSMA1P25786 263 aaKnown RBP10.38□□□□□ -0.75
SHMT2-209ENST00000553949 GABRA5P31644 462 aa10.38□□□□□ -0.75
SHMT2-209ENST00000553949 CD200P41217 278 aa10.38□□□□□ -0.75
SHMT2-209ENST00000553949 SRP9P49458 86 aaKnown RBP10.38□□□□□ -0.75
SHMT2-209ENST00000553949 EFNA4P52798 201 aa10.38□□□□□ -0.75
SHMT2-209ENST00000553949 ATP5J2P56134 94 aa10.38□□□□□ -0.75
SHMT2-209ENST00000553949 MZT1Q08AG7 82 aa10.38□□□□□ -0.75
SHMT2-209ENST00000553949 MAB21L1Q13394 359 aa10.38□□□□□ -0.75
SHMT2-209ENST00000553949 INSL4Q14641 139 aa10.38□□□□□ -0.75
SHMT2-209ENST00000553949 TESK1Q15569 626 aa10.38□□□□□ -0.75
SHMT2-209ENST00000553949 TRAM1Q15629 374 aa10.38□□□□□ -0.75
SHMT2-209ENST00000553949 CEACAM21Q3KPI0 293 aa10.38□□□□□ -0.75
SHMT2-209ENST00000553949 ACSM3Q53FZ2 586 aa10.38□□□□□ -0.75
SHMT2-209ENST00000553949 SPRNQ5BIV9 151 aa10.38□□□□□ -0.75
SHMT2-209ENST00000553949 DMRTC1Q5HYR2 192 aa10.38□□□□□ -0.75
SHMT2-209ENST00000553949 UTS2BQ765I0 119 aa10.38□□□□□ -0.75
SHMT2-209ENST00000553949 SERPINA12Q8IW75 414 aa10.38□□□□□ -0.75
SHMT2-209ENST00000553949 ITLN1Q8WWA0 313 aa10.38□□□□□ -0.75
SHMT2-209ENST00000553949 TMEM106AQ96A25 262 aa10.38□□□□□ -0.75
SHMT2-209ENST00000553949 MEGF10Q96KG7 1140 aa10.38□□□□□ -0.75
SHMT2-209ENST00000553949 TECTBQ96PL2 329 aa10.38□□□□□ -0.75
SHMT2-209ENST00000553949 HIST1H2AAQ96QV6 131 aa10.38□□□□□ -0.75
SHMT2-209ENST00000553949 RTL8AQ9BWD3 113 aa10.38□□□□□ -0.75
SHMT2-209ENST00000553949 MRPS26Q9BYN8 205 aaKnown RBP10.38□□□□□ -0.75
SHMT2-209ENST00000553949 FGF23Q9GZV9 251 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-209ENST00000553949 SAP30LQ9HAJ7 183 aa10.38□□□□□ -0.75
SHMT2-209ENST00000553949 SETXQ7Z333 2677 aaKnown RBP10.38□□□□□ -0.75
SHMT2-209ENST00000553949 DSCAMO60469 2012 aa10.38□□□□□ -0.75
SHMT2-209ENST00000553949 TRBV5-7A0A0A0MS05 114 aa10.37□□□□□ -0.75
SHMT2-209ENST00000553949 IGHV3-64DA0A0J9YX35 117 aa10.37□□□□□ -0.75
SHMT2-209ENST00000553949 LOC100289279A0A1B0GTE1 492 aa10.37□□□□□ -0.75
SHMT2-209ENST00000553949 A0A1W2PPK0 400 aa10.37□□□□□ -0.75
SHMT2-209ENST00000553949 LY6HO94772 140 aa10.37□□□□□ -0.75
SHMT2-209ENST00000553949 ATF1P18846 271 aa10.37□□□□□ -0.75
SHMT2-209ENST00000553949 TNFRSF1AP19438 455 aa10.37□□□□□ -0.75
SHMT2-209ENST00000553949 THBS2P35442 1172 aa10.37□□□□□ -0.75
SHMT2-209ENST00000553949 CACNA1DQ01668 2161 aa10.37□□□□□ -0.75
SHMT2-209ENST00000553949 UBE2V2Q15819 145 aa10.37□□□□□ -0.75
SHMT2-209ENST00000553949 ASPHD2Q6ICH7 369 aa10.37□□□□□ -0.75
SHMT2-209ENST00000553949 LRRC75A-AS1Q8N1F1 130 aa10.37□□□□□ -0.75
SHMT2-209ENST00000553949 CELF2-AS1Q8N7Q2 184 aa10.37□□□□□ -0.75
SHMT2-209ENST00000553949 OR5A2Q8NGI9 324 aa10.37□□□□□ -0.75
SHMT2-209ENST00000553949 OR5D14Q8NGL3 314 aa10.37□□□□□ -0.75
SHMT2-209ENST00000553949 THRSPQ92748 146 aa10.37□□□□□ -0.75
SHMT2-209ENST00000553949 RNF170Q96K19 258 aa10.37□□□□□ -0.75
SHMT2-209ENST00000553949 DERL3Q96Q80 235 aa10.37□□□□□ -0.75
SHMT2-209ENST00000553949 ZCCHC4Q9H5U6 513 aa10.37□□□□□ -0.75
SHMT2-209ENST00000553949 BARX1Q9HBU1 254 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-209ENST00000553949 C14orf119Q9NWQ9 140 aa10.37□□□□□ -0.75
SHMT2-209ENST00000553949 TAS2R4Q9NYW5 299 aa10.37□□□□□ -0.75
SHMT2-209ENST00000553949 POLQO75417 2590 aa10.37□□□□□ -0.75
SHMT2-209ENST00000553949 IGKV1-9A0A0C4DH69 117 aa10.36□□□□□ -0.75
SHMT2-209ENST00000553949 OR5B21A6NL26 309 aa10.36□□□□□ -0.75
SHMT2-209ENST00000553949 TMEM210A6NLX4 147 aa10.36□□□□□ -0.75
SHMT2-209ENST00000553949 ZNF732B4DXR9 585 aa10.36□□□□□ -0.75
SHMT2-209ENST00000553949 PIN1P1O15428 100 aa10.36□□□□□ -0.75
SHMT2-209ENST00000553949 CDC14BO60729 498 aa10.36□□□□□ -0.75
SHMT2-209ENST00000553949 SC5DO75845 299 aa10.36□□□□□ -0.75
SHMT2-209ENST00000553949 RGS9O75916 674 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-209ENST00000553949 PTBP3O95758 552 aaKnown RBP10.36□□□□□ -0.75
SHMT2-209ENST00000553949 GRPP07492 148 aa10.36□□□□□ -0.75
SHMT2-209ENST00000553949 DAOP14920 347 aa10.36□□□□□ -0.75
SHMT2-209ENST00000553949 MAPK3P27361 379 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-209ENST00000553949 GATA4P43694 442 aa10.36□□□□□ -0.75
SHMT2-209ENST00000553949 GPM6AP51674 278 aa10.36□□□□□ -0.75
SHMT2-209ENST00000553949 GNG3P63215 75 aa10.36□□□□□ -0.75
SHMT2-209ENST00000553949 MRPS11P82912 194 aaKnown RBP10.36□□□□□ -0.75
SHMT2-209ENST00000553949 FABP5Q01469 135 aa10.36□□□□□ -0.75
SHMT2-209ENST00000553949 CNN3Q15417 329 aaKnown RBP10.36□□□□□ -0.75
SHMT2-209ENST00000553949 PRAMEF6Q5VXH4 476 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms