RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 A0A0U1RQV5 110 aa7.04□□□□□ -1.28
PSEN1-209ENST00000553855 hCG_1807616A0A1W2PRN6 198 aa7.04□□□□□ -1.28
PSEN1-209ENST00000553855 IRGMA1A4Y4 181 aa7.04□□□□□ -1.28
PSEN1-209ENST00000553855 METTL15A6NJ78 407 aa7.04□□□□□ -1.28
PSEN1-209ENST00000553855 INAFM1C9JVW0 142 aa7.04□□□□□ -1.28
PSEN1-209ENST00000553855 H0YL77 283 aa7.04□□□□□ -1.28
PSEN1-209ENST00000553855 ENTPD6O75354 484 aa7.04□□□□□ -1.28
PSEN1-209ENST00000553855 SULT1C4O75897 302 aa7.04□□□□□ -1.28
PSEN1-209ENST00000553855 FADS2O95864 444 aaKnown RBP7.04□□□□□ -1.28
PSEN1-209ENST00000553855 IFNA2P01563 188 aa7.04□□□□□ -1.28
PSEN1-209ENST00000553855 HLA-DPB1P04440 258 aa7.04□□□□□ -1.28
PSEN1-209ENST00000553855 GRPP07492 148 aa7.04□□□□□ -1.28
PSEN1-209ENST00000553855 MDH2P40926 338 aaKnown RBP7.04□□□□□ -1.28
PSEN1-209ENST00000553855 CD200P41217 278 aa7.04□□□□□ -1.28
PSEN1-209ENST00000553855 BTG1P62324 171 aa7.04□□□□□ -1.28
PSEN1-209ENST00000553855 EFNB1P98172 346 aa7.04□□□□□ -1.28
PSEN1-209ENST00000553855 FAM3AP98173 230 aa7.04□□□□□ -1.28
PSEN1-209ENST00000553855 RIPPLY1Q0D2K3 151 aa7.04□□□□□ -1.28
PSEN1-209ENST00000553855 CHRFAM7AQ494W8 412 aa7.04□□□□□ -1.28
PSEN1-209ENST00000553855 SLC25A30Q5SVS4 291 aa7.04□□□□□ -1.28
PSEN1-209ENST00000553855 KCTD8Q6ZWB6 473 aa7.04□□□□□ -1.28
PSEN1-209ENST00000553855 KCTD20Q7Z5Y7 419 aa7.04□□□□□ -1.28
PSEN1-209ENST00000553855 MOGAT3Q86VF5 341 aa7.04□□□□□ -1.28
PSEN1-209ENST00000553855 DHRSXQ8N5I4 330 aa7.04□□□□□ -1.28
PSEN1-209ENST00000553855 SEMA6DQ8NFY4 1073 aa7.04□□□□□ -1.28
PSEN1-209ENST00000553855 SVIPQ8NHG7 77 aa7.04□□□□□ -1.28
PSEN1-209ENST00000553855 CYGBQ8WWM9 190 aa7.04□□□□□ -1.28
PSEN1-209ENST00000553855 SLC29A1Q99808 456 aa7.04□□□□□ -1.28
PSEN1-209ENST00000553855 RTL8AQ9BWD3 113 aa7.04□□□□□ -1.28
PSEN1-209ENST00000553855 PBOV1Q9GZY1 135 aa7.04□□□□□ -1.28
PSEN1-209ENST00000553855 ZNF665Q9H7R5 613 aa7.04□□□□□ -1.28
PSEN1-209ENST00000553855 DCLRE1BQ9H816 532 aa7.04□□□□□ -1.28
PSEN1-209ENST00000553855 GCM1Q9NP62 436 aa7.04□□□□□ -1.28
PSEN1-209ENST00000553855 TRIM36Q9NQ86 728 aa7.04□□□□□ -1.28
PSEN1-209ENST00000553855 FAM118AQ9NWS6 357 aa7.04□□□□□ -1.28
PSEN1-209ENST00000553855 CDC42EP3Q9UKI2 254 aa7.04□□□□□ -1.28
PSEN1-209ENST00000553855 COPS3Q9UNS2 423 aa7.04□□□□□ -1.28
PSEN1-209ENST00000553855 KLHDC2Q9Y2U9 406 aa7.04□□□□□ -1.28
PSEN1-209ENST00000553855 RPL36Q9Y3U8 105 aaKnown RBP7.04□□□□□ -1.28
PSEN1-209ENST00000553855 SNX5Q9Y5X3 404 aa7.04□□□□□ -1.28
PSEN1-209ENST00000553855 CACNG2Q9Y698 323 aa7.04□□□□□ -1.28
PSEN1-209ENST00000553855 R4GMQ9 66 aa7.04□□□□□ -1.28
PSEN1-209ENST00000553855 FLNAP21333 2647 aaKnown RBP7.03□□□□□ -1.28
PSEN1-209ENST00000553855 PPIAL4EA0A075B759 164 aa7.03□□□□□ -1.28
PSEN1-209ENST00000553855 IGHV3-64DA0A0J9YX35 117 aa7.03□□□□□ -1.28
PSEN1-209ENST00000553855 ZNF816-ZNF321PA0A0X1KG74 233 aa7.03□□□□□ -1.28
PSEN1-209ENST00000553855 hCG_38984A0A1B0GV85 526 aa7.03□□□□□ -1.28
PSEN1-209ENST00000553855 A0A1B0GVI7 797 aa7.03□□□□□ -1.28
PSEN1-209ENST00000553855 A0A1W2PQL4 384 aaPredicted RBP7.03□□□□□ -1.28
PSEN1-209ENST00000553855 ANKRD65E5RJM6 399 aa7.03□□□□□ -1.28
PSEN1-209ENST00000553855 PPIAL4DF5H284 164 aa7.03□□□□□ -1.28
PSEN1-209ENST00000553855 TMEM178BH3BS89 294 aa7.03□□□□□ -1.28
PSEN1-209ENST00000553855 SLC16A6O15403 523 aa7.03□□□□□ -1.28
PSEN1-209ENST00000553855 MLNRO43193 412 aa7.03□□□□□ -1.28
PSEN1-209ENST00000553855 RPP14O95059 124 aaKnown RBP7.03□□□□□ -1.28
PSEN1-209ENST00000553855 APOL3O95236 402 aa7.03□□□□□ -1.28
PSEN1-209ENST00000553855 RPSAP08865 295 aaKnown RBP7.03□□□□□ -1.28
PSEN1-209ENST00000553855 PPIAL4FP0DN26 164 aa7.03□□□□□ -1.28
PSEN1-209ENST00000553855 ZNF12P17014 697 aa7.03□□□□□ -1.28
PSEN1-209ENST00000553855 CPT2P23786 658 aa7.03□□□□□ -1.28
PSEN1-209ENST00000553855 SRP14P37108 136 aaKnown RBP7.03□□□□□ -1.28
PSEN1-209ENST00000553855 ACTA2P62736 377 aa7.03□□□□□ -1.28
PSEN1-209ENST00000553855 ACTG2P63267 376 aa7.03□□□□□ -1.28
PSEN1-209ENST00000553855 SCGB2A2Q13296 93 aa7.03□□□□□ -1.28
PSEN1-209ENST00000553855 ZNF181Q2M3W8 571 aa7.03□□□□□ -1.28
PSEN1-209ENST00000553855 TMEM155Q4W5P6 130 aa7.03□□□□□ -1.28
PSEN1-209ENST00000553855 KLHL22Q53GT1 634 aa7.03□□□□□ -1.28
PSEN1-209ENST00000553855 ESCO2Q56NI9 601 aa7.03□□□□□ -1.28
PSEN1-209ENST00000553855 TMEM255AQ5JRV8 349 aa7.03□□□□□ -1.28
PSEN1-209ENST00000553855 ZNF771Q7L3S4 317 aaPredicted RBP7.03□□□□□ -1.28
PSEN1-209ENST00000553855 ZDHHC23Q8IYP9 409 aa7.03□□□□□ -1.28
PSEN1-209ENST00000553855 ACBD7Q8N6N7 88 aa7.03□□□□□ -1.28
PSEN1-209ENST00000553855 BOLLQ8N9W6 283 aaKnown RBP7.03□□□□□ -1.28
PSEN1-209ENST00000553855 CCDC54Q8NEL0 328 aa7.03□□□□□ -1.28
PSEN1-209ENST00000553855 OR8B12Q8NGG6 310 aa7.03□□□□□ -1.28
PSEN1-209ENST00000553855 ZNF420Q8TAQ5 688 aaPredicted RBP7.03□□□□□ -1.28
PSEN1-209ENST00000553855 PIGCQ92535 297 aa7.03□□□□□ -1.28
PSEN1-209ENST00000553855 MSI2Q96DH6 328 aaKnown RBP7.03□□□□□ -1.28
PSEN1-209ENST00000553855 FAM71F1Q96KD3 344 aaPredicted RBP7.03□□□□□ -1.28
PSEN1-209ENST00000553855 MBOAT4Q96T53 435 aa7.03□□□□□ -1.28
PSEN1-209ENST00000553855 VCX3BQ9H321 246 aa7.03□□□□□ -1.28
PSEN1-209ENST00000553855 PLEKHA1Q9HB21 404 aa7.03□□□□□ -1.28
PSEN1-209ENST00000553855 LPAR2Q9HBW0 351 aa7.03□□□□□ -1.28
PSEN1-209ENST00000553855 UFSP2Q9NUQ7 469 aa7.03□□□□□ -1.28
PSEN1-209ENST00000553855 C1orf123Q9NWV4 160 aa7.03□□□□□ -1.28
PSEN1-209ENST00000553855 TMEM160Q9NX00 188 aa7.03□□□□□ -1.28
PSEN1-209ENST00000553855 FAM206AQ9NX38 181 aa7.03□□□□□ -1.28
PSEN1-209ENST00000553855 CHCHD3Q9NX63 227 aaKnown RBP7.03□□□□□ -1.28
PSEN1-209ENST00000553855 RNF7Q9UBF6 113 aa7.03□□□□□ -1.28
PSEN1-209ENST00000553855 NUFIP1Q9UHK0 495 aaKnown RBP7.03□□□□□ -1.28
PSEN1-209ENST00000553855 ENPP5Q9UJA9 477 aa7.03□□□□□ -1.28
PSEN1-209ENST00000553855 GNG8Q9UK08 70 aa7.03□□□□□ -1.28
PSEN1-209ENST00000553855 OR52A1Q9UKL2 312 aa7.03□□□□□ -1.28
PSEN1-209ENST00000553855 PPIAL4AQ9Y536 164 aa7.03□□□□□ -1.28
PSEN1-209ENST00000553855 ARFGEF3Q5TH69 2177 aa7.03□□□□□ -1.28
PSEN1-209ENST00000553855 MED13LQ71F56 2210 aa7.03□□□□□ -1.28
PSEN1-209ENST00000553855 TRAV38-1A0A0B4J264 116 aa7.02□□□□□ -1.29
PSEN1-209ENST00000553855 TMEM210A6NLX4 147 aa7.02□□□□□ -1.29
PSEN1-209ENST00000553855 ZNF850A8MQ14 1090 aa7.02□□□□□ -1.29
PSEN1-209ENST00000553855 CRLF1O75462 422 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms