RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 TREML4Q6UXN2 200 aa10.54□□□□□ -0.72
LINC00643-202ENST00000553426 PRSS45Q7RTY3 260 aa10.54□□□□□ -0.72
LINC00643-202ENST00000553426 WDR86Q86TI4 376 aa10.54□□□□□ -0.72
LINC00643-202ENST00000553426 C11orf53Q8IXP5 236 aa10.54□□□□□ -0.72
LINC00643-202ENST00000553426 OR10Z1Q8NGY1 313 aa10.54□□□□□ -0.72
LINC00643-202ENST00000553426 FAM81AQ8TBF8 368 aa10.54□□□□□ -0.72
LINC00643-202ENST00000553426 DYRK2Q92630 601 aa10.54□□□□□ -0.72
LINC00643-202ENST00000553426 ITPKCQ96DU7 683 aa10.54□□□□□ -0.72
LINC00643-202ENST00000553426 CLPTM1LQ96KA5 538 aa10.54□□□□□ -0.72
LINC00643-202ENST00000553426 CHIAQ9BZP6 476 aa10.54□□□□□ -0.72
LINC00643-202ENST00000553426 DNTTIP1Q9H147 329 aa10.54□□□□□ -0.72
LINC00643-202ENST00000553426 DPAGT1Q9H3H5 408 aa10.54□□□□□ -0.72
LINC00643-202ENST00000553426 HAO2Q9NYQ3 351 aa10.54□□□□□ -0.72
LINC00643-202ENST00000553426 LAMP5Q9UJQ1 280 aa10.54□□□□□ -0.72
LINC00643-202ENST00000553426 BTBD17A6NE02 478 aa10.53□□□□□ -0.72
LINC00643-202ENST00000553426 ZNF850A8MQ14 1090 aa10.53□□□□□ -0.72
LINC00643-202ENST00000553426 SELENOFO60613 162 aa10.53□□□□□ -0.72
LINC00643-202ENST00000553426 CST4P01036 141 aa10.53□□□□□ -0.72
LINC00643-202ENST00000553426 PSMA6P60900 246 aaKnown RBP10.53□□□□□ -0.72
LINC00643-202ENST00000553426 GMFBP60983 142 aa10.53□□□□□ -0.72
LINC00643-202ENST00000553426 GUCA2AQ02747 115 aa10.53□□□□□ -0.72
LINC00643-202ENST00000553426 PRDX4Q13162 271 aa10.53□□□□□ -0.72
LINC00643-202ENST00000553426 IKZF1Q13422 519 aa10.53□□□□□ -0.72
LINC00643-202ENST00000553426 OLFML2AQ68BL7 652 aa10.53□□□□□ -0.72
LINC00643-202ENST00000553426 KCTD18Q6PI47 426 aaPredicted RBP10.53□□□□□ -0.72
LINC00643-202ENST00000553426 VMO1Q7Z5L0 202 aa10.53□□□□□ -0.72
LINC00643-202ENST00000553426 KRT77Q7Z794 578 aa10.53□□□□□ -0.72
LINC00643-202ENST00000553426 CPOQ8IVL8 374 aa10.53□□□□□ -0.72
LINC00643-202ENST00000553426 PDZD9Q8IXQ8 264 aa10.53□□□□□ -0.72
LINC00643-202ENST00000553426 ZDHHC23Q8IYP9 409 aa10.53□□□□□ -0.72
LINC00643-202ENST00000553426 ADGRG5Q8IZF4 528 aa10.53□□□□□ -0.72
LINC00643-202ENST00000553426 NPRL2Q8WTW4 380 aa10.53□□□□□ -0.72
LINC00643-202ENST00000553426 CANT1Q8WVQ1 401 aa10.53□□□□□ -0.72
LINC00643-202ENST00000553426 LRTOMTQ8WZ04 291 aa10.53□□□□□ -0.72
LINC00643-202ENST00000553426 PIGCQ92535 297 aa10.53□□□□□ -0.72
LINC00643-202ENST00000553426 TAF15Q92804 592 aaKnown RBP eCLIP10.53□□□□□ -0.72
LINC00643-202ENST00000553426 ITFG2Q969R8 447 aa10.53□□□□□ -0.72
LINC00643-202ENST00000553426 MED30Q96HR3 178 aa10.53□□□□□ -0.72
LINC00643-202ENST00000553426 RNF170Q96K19 258 aa10.53□□□□□ -0.72
LINC00643-202ENST00000553426 AMELYQ99218 206 aa10.53□□□□□ -0.72
LINC00643-202ENST00000553426 TLNRD1Q9H1K6 362 aa10.53□□□□□ -0.72
LINC00643-202ENST00000553426 TAS2R1Q9NYW7 299 aa10.53□□□□□ -0.72
LINC00643-202ENST00000553426 ZNF319Q9P2F9 582 aa10.53□□□□□ -0.72
LINC00643-202ENST00000553426 CLPSL1A2RUU4 121 aa10.52□□□□□ -0.73
LINC00643-202ENST00000553426 ACOD1A6NK06 481 aa10.52□□□□□ -0.73
LINC00643-202ENST00000553426 ACOT8O14734 319 aa10.52□□□□□ -0.73
LINC00643-202ENST00000553426 NDUFA7O95182 113 aa10.52□□□□□ -0.73
LINC00643-202ENST00000553426 FBP1P09467 338 aa10.52□□□□□ -0.73
LINC00643-202ENST00000553426 T-ENOLP0DO92 83 aa10.52□□□□□ -0.73
LINC00643-202ENST00000553426 MAP2K3P46734 347 aa10.52□□□□□ -0.73
LINC00643-202ENST00000553426 FLOT2Q14254 428 aa10.52□□□□□ -0.73
LINC00643-202ENST00000553426 SNAPC1Q16533 368 aa10.52□□□□□ -0.73
LINC00643-202ENST00000553426 DNAL1Q4LDG9 190 aa10.52□□□□□ -0.73
LINC00643-202ENST00000553426 ATPAF1Q5TC12 328 aaPredicted RBP10.52□□□□□ -0.73
LINC00643-202ENST00000553426 GDPGP1Q6ZNW5 385 aa10.52□□□□□ -0.73
LINC00643-202ENST00000553426 SPATA24Q86W54 205 aa10.52□□□□□ -0.73
LINC00643-202ENST00000553426 KIR3DL3Q8N743 410 aa10.52□□□□□ -0.73
LINC00643-202ENST00000553426 FAM216BQ8N7L0 139 aa10.52□□□□□ -0.73
LINC00643-202ENST00000553426 OR5T2Q8NGG2 359 aa10.52□□□□□ -0.73
LINC00643-202ENST00000553426 OR5P3Q8WZ94 311 aa10.52□□□□□ -0.73
LINC00643-202ENST00000553426 H1FXQ92522 213 aaKnown RBP10.52□□□□□ -0.73
LINC00643-202ENST00000553426 RPL3LQ92901 407 aaKnown RBP10.52□□□□□ -0.73
LINC00643-202ENST00000553426 PKP2Q99959 881 aa10.52□□□□□ -0.73
LINC00643-202ENST00000553426 MROQ9BYG7 248 aa10.52□□□□□ -0.73
LINC00643-202ENST00000553426 C1RLQ9NZP8 487 aa10.52□□□□□ -0.73
LINC00643-202ENST00000553426 A0A0U1RQK1 487 aa10.51□□□□□ -0.73
LINC00643-202ENST00000553426 ZNF816-ZNF321PA0A0X1KG74 233 aa10.51□□□□□ -0.73
LINC00643-202ENST00000553426 TMEM269A0A1B0GVZ9 245 aa10.51□□□□□ -0.73
LINC00643-202ENST00000553426 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.51□□□□□ -0.73
LINC00643-202ENST00000553426 GYG2O15488 501 aa10.51□□□□□ -0.73
LINC00643-202ENST00000553426 GSC2O15499 205 aa10.51□□□□□ -0.73
LINC00643-202ENST00000553426 PAHP00439 452 aa10.51□□□□□ -0.73
LINC00643-202ENST00000553426 GLRA1P23415 457 aa10.51□□□□□ -0.73
LINC00643-202ENST00000553426 ACKR3P25106 362 aa10.51□□□□□ -0.73
LINC00643-202ENST00000553426 IER3P46695 156 aa10.51□□□□□ -0.73
LINC00643-202ENST00000553426 TGM4P49221 684 aa10.51□□□□□ -0.73
LINC00643-202ENST00000553426 CDK5Q00535 292 aa10.51□□□□□ -0.73
LINC00643-202ENST00000553426 APOFQ13790 326 aa10.51□□□□□ -0.73
LINC00643-202ENST00000553426 BLMHQ13867 455 aa10.51□□□□□ -0.73
LINC00643-202ENST00000553426 LCN1P1Q5VSP4 162 aa10.51□□□□□ -0.73
LINC00643-202ENST00000553426 STUMQ69YW2 141 aa10.51□□□□□ -0.73
LINC00643-202ENST00000553426 BRICD5Q6PL45 260 aa10.51□□□□□ -0.73
LINC00643-202ENST00000553426 DEGS2Q6QHC5 323 aa10.51□□□□□ -0.73
LINC00643-202ENST00000553426 METAP1DQ6UB28 335 aaPredicted RBP10.51□□□□□ -0.73
LINC00643-202ENST00000553426 THAP5Q7Z6K1 395 aa10.51□□□□□ -0.73
LINC00643-202ENST00000553426 TMEM179BQ7Z7N9 219 aa10.51□□□□□ -0.73
LINC00643-202ENST00000553426 COMMD2Q86X83 199 aa10.51□□□□□ -0.73
LINC00643-202ENST00000553426 LDLRAD3Q86YD5 345 aa10.51□□□□□ -0.73
LINC00643-202ENST00000553426 LY6G5BQ8NDX9 201 aa10.51□□□□□ -0.73
LINC00643-202ENST00000553426 OR8B12Q8NGG6 310 aa10.51□□□□□ -0.73
LINC00643-202ENST00000553426 ZNF671Q8TAW3 534 aa10.51□□□□□ -0.73
LINC00643-202ENST00000553426 WFDC12Q8WWY7 111 aa10.51□□□□□ -0.73
LINC00643-202ENST00000553426 DNAJC9Q8WXX5 260 aa10.51□□□□□ -0.73
LINC00643-202ENST00000553426 RAB3IPQ96QF0 476 aaPredicted RBP10.51□□□□□ -0.73
LINC00643-202ENST00000553426 DCTN5Q9BTE1 182 aa10.51□□□□□ -0.73
LINC00643-202ENST00000553426 PRRG3Q9BZD7 231 aa10.51□□□□□ -0.73
LINC00643-202ENST00000553426 YIPF3Q9GZM5 350 aa10.51□□□□□ -0.73
LINC00643-202ENST00000553426 SNTG1Q9NSN8 517 aa10.51□□□□□ -0.73
LINC00643-202ENST00000553426 DNAJB9Q9UBS3 223 aa10.51□□□□□ -0.73
LINC00643-202ENST00000553426 SLC25A10Q9UBX3 287 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms