RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 RAB9AP51151 201 aa1.55□□□□□ -2.16
GPN3-209ENST00000551079 AP1S2P56377 157 aa1.55□□□□□ -2.16
GPN3-209ENST00000551079 KRTAP12-1P59990 96 aa1.55□□□□□ -2.16
GPN3-209ENST00000551079 UBE2MP61081 183 aaKnown RBP1.55□□□□□ -2.16
GPN3-209ENST00000551079 LRRC74AQ0VAA2 488 aa1.55□□□□□ -2.16
GPN3-209ENST00000551079 ILKQ13418 452 aa1.55□□□□□ -2.16
GPN3-209ENST00000551079 HADHQ16836 314 aaKnown RBP1.55□□□□□ -2.16
GPN3-209ENST00000551079 C6orf99Q4VX62 202 aa1.55□□□□□ -2.16
GPN3-209ENST00000551079 RWDD4Q6NW29 188 aaKnown RBP1.55□□□□□ -2.16
GPN3-209ENST00000551079 DAZ4Q86SG3 579 aaKnown RBP1.55□□□□□ -2.16
GPN3-209ENST00000551079 OR4M2Q8NGB6 313 aa1.55□□□□□ -2.16
GPN3-209ENST00000551079 OR52E5Q8NH55 327 aa1.55□□□□□ -2.16
GPN3-209ENST00000551079 SFXN3Q9BWM7 321 aa1.55□□□□□ -2.16
GPN3-209ENST00000551079 TRIM45Q9H8W5 580 aaPredicted RBP1.55□□□□□ -2.16
GPN3-209ENST00000551079 CCNB1IP1Q9NPC3 277 aa1.55□□□□□ -2.16
GPN3-209ENST00000551079 DAZ1Q9NQZ3 744 aaKnown RBP1.55□□□□□ -2.16
GPN3-209ENST00000551079 TREX1Q9NSU2 369 aa1.55□□□□□ -2.16
GPN3-209ENST00000551079 ASF1BQ9NVP2 202 aa1.55□□□□□ -2.16
GPN3-209ENST00000551079 RWDD2AQ9UIY3 292 aa1.55□□□□□ -2.16
GPN3-209ENST00000551079 ZNF257Q9Y2Q1 563 aa1.55□□□□□ -2.16
GPN3-209ENST00000551079 PRRC2BQ5JSZ5 2229 aaKnown RBP1.54□□□□□ -2.16
GPN3-209ENST00000551079 CACNA1GO43497 2377 aa1.54□□□□□ -2.16
GPN3-209ENST00000551079 CCL15-CCL14A0A0B4J2E2 113 aa1.54□□□□□ -2.16
GPN3-209ENST00000551079 CLDN34H7C241 214 aa1.54□□□□□ -2.16
GPN3-209ENST00000551079 BCKDKO14874 412 aa1.54□□□□□ -2.16
GPN3-209ENST00000551079 PSPHP1O15172 72 aa1.54□□□□□ -2.16
GPN3-209ENST00000551079 MMP7P09237 267 aaPredicted RBP1.54□□□□□ -2.16
GPN3-209ENST00000551079 FUSP35637 526 aaKnown RBP eCLIP1.54□□□□□ -2.16
GPN3-209ENST00000551079 TGM4P49221 684 aa1.54□□□□□ -2.16
GPN3-209ENST00000551079 PPP1CAP62136 330 aa1.54□□□□□ -2.16
GPN3-209ENST00000551079 TFDP2Q14188 446 aa1.54□□□□□ -2.16
GPN3-209ENST00000551079 RCN1Q15293 331 aa1.54□□□□□ -2.16
GPN3-209ENST00000551079 CCL15Q16663 113 aa1.54□□□□□ -2.16
GPN3-209ENST00000551079 TMEM236Q5W0B7 351 aa1.54□□□□□ -2.16
GPN3-209ENST00000551079 MORN3Q6PF18 240 aaPredicted RBP1.54□□□□□ -2.16
GPN3-209ENST00000551079 APRG1Q8IVJ8 170 aa1.54□□□□□ -2.16
GPN3-209ENST00000551079 BBS5Q8N3I7 341 aa1.54□□□□□ -2.16
GPN3-209ENST00000551079 LRRC75AQ8NAA5 344 aa1.54□□□□□ -2.16
GPN3-209ENST00000551079 OR51F2Q8NH61 342 aa1.54□□□□□ -2.16
GPN3-209ENST00000551079 S100PBPQ96BU1 408 aa1.54□□□□□ -2.16
GPN3-209ENST00000551079 CTAGE15A4D2H0 777 aa1.53□□□□□ -2.16
GPN3-209ENST00000551079 CTNSO60931 367 aa1.53□□□□□ -2.16
GPN3-209ENST00000551079 FCN3O75636 299 aa1.53□□□□□ -2.16
GPN3-209ENST00000551079 IGHV1-46P01743 117 aa1.53□□□□□ -2.16
GPN3-209ENST00000551079 IFNW1P05000 195 aa1.53□□□□□ -2.16
GPN3-209ENST00000551079 TACSTD2P09758 323 aa1.53□□□□□ -2.16
GPN3-209ENST00000551079 OR1G1P47890 313 aa1.53□□□□□ -2.16
GPN3-209ENST00000551079 ERFP50548 548 aa1.53□□□□□ -2.16
GPN3-209ENST00000551079 OR2B8PP59922 312 aa1.53□□□□□ -2.16
GPN3-209ENST00000551079 RPS15AP62244 130 aaKnown RBP1.53□□□□□ -2.16
GPN3-209ENST00000551079 ZNF33AQ06730 810 aa1.53□□□□□ -2.16
GPN3-209ENST00000551079 ITIH4Q14624 930 aa1.53□□□□□ -2.16
GPN3-209ENST00000551079 OR1Q1Q15612 314 aa1.53□□□□□ -2.16
GPN3-209ENST00000551079 FAM104BQ5XKR9 115 aa1.53□□□□□ -2.16
GPN3-209ENST00000551079 TMEM53Q6P2H8 277 aa1.53□□□□□ -2.16
GPN3-209ENST00000551079 EIF3MQ7L2H7 374 aaKnown RBP1.53□□□□□ -2.16
GPN3-209ENST00000551079 CTAGE6Q86UF2 777 aa1.53□□□□□ -2.16
GPN3-209ENST00000551079 UNC93AQ86WB7 457 aa1.53□□□□□ -2.16
GPN3-209ENST00000551079 BBS7Q8IWZ6 715 aa1.53□□□□□ -2.16
GPN3-209ENST00000551079 LINC00469Q8N7U9 141 aa1.53□□□□□ -2.16
GPN3-209ENST00000551079 C8orf31Q8N9H6 132 aa1.53□□□□□ -2.16
GPN3-209ENST00000551079 LY6G5BQ8NDX9 201 aa1.53□□□□□ -2.16
GPN3-209ENST00000551079 ASZ1Q8WWH4 475 aa1.53□□□□□ -2.16
GPN3-209ENST00000551079 JSRP1Q96MG2 331 aaPredicted RBP1.53□□□□□ -2.16
GPN3-209ENST00000551079 ZNF302Q9NR11 478 aa1.53□□□□□ -2.16
GPN3-209ENST00000551079 RAB20Q9NX57 234 aa1.53□□□□□ -2.16
GPN3-209ENST00000551079 IGKV1-6A0A0C4DH72 117 aa1.52□□□□□ -2.17
GPN3-209ENST00000551079 C3orf84H3BNL1 204 aa1.52□□□□□ -2.17
GPN3-209ENST00000551079 XRCC2O43543 280 aa1.52□□□□□ -2.17
GPN3-209ENST00000551079 CCDC22O60826 627 aa1.52□□□□□ -2.17
GPN3-209ENST00000551079 TDP2O95551 362 aa1.52□□□□□ -2.17
GPN3-209ENST00000551079 PTHP01270 115 aa1.52□□□□□ -2.17
GPN3-209ENST00000551079 IGKV1-39P01597 117 aa1.52□□□□□ -2.17
GPN3-209ENST00000551079 IGKV1D-39P04432 117 aa1.52□□□□□ -2.17
GPN3-209ENST00000551079 CXCR1P25024 350 aa1.52□□□□□ -2.17
GPN3-209ENST00000551079 BEX5Q5H9J7 111 aa1.52□□□□□ -2.17
GPN3-209ENST00000551079 ZNF678Q5SXM1 525 aa1.52□□□□□ -2.17
GPN3-209ENST00000551079 KDM4DQ6B0I6 523 aa1.52□□□□□ -2.17
GPN3-209ENST00000551079 WDR59Q6PJI9 974 aa1.52□□□□□ -2.17
GPN3-209ENST00000551079 FAM131AQ6UXB0 335 aa1.52□□□□□ -2.17
GPN3-209ENST00000551079 RAB43Q86YS6 212 aa1.52□□□□□ -2.17
GPN3-209ENST00000551079 RNF10Q8N5U6 811 aaKnown RBP1.52□□□□□ -2.17
GPN3-209ENST00000551079 RCN3Q96D15 328 aa1.52□□□□□ -2.17
GPN3-209ENST00000551079 SNF8Q96H20 258 aa1.52□□□□□ -2.17
GPN3-209ENST00000551079 FAM19A4Q96LR4 140 aa1.52□□□□□ -2.17
GPN3-209ENST00000551079 OPALINQ96PE5 141 aa1.52□□□□□ -2.17
GPN3-209ENST00000551079 AGMATQ9BSE5 352 aa1.52□□□□□ -2.17
GPN3-209ENST00000551079 DUSP21Q9H596 190 aa1.52□□□□□ -2.17
GPN3-209ENST00000551079 HEBP1Q9NRV9 189 aa1.52□□□□□ -2.17
GPN3-209ENST00000551079 C2orf16Q68DN1 1984 aa1.52□□□□□ -2.17
GPN3-209ENST00000551079 A0A1W2PRD5 423 aa1.51□□□□□ -2.17
GPN3-209ENST00000551079 SLC19A2O60779 497 aa1.51□□□□□ -2.17
GPN3-209ENST00000551079 THRAP10827 490 aa1.51□□□□□ -2.17
GPN3-209ENST00000551079 GFAPP14136 432 aa1.51□□□□□ -2.17
GPN3-209ENST00000551079 GSTM3P21266 225 aa1.51□□□□□ -2.17
GPN3-209ENST00000551079 IL3RAP26951 378 aa1.51□□□□□ -2.17
GPN3-209ENST00000551079 SLC1A2P43004 574 aa1.51□□□□□ -2.17
GPN3-209ENST00000551079 CPTPQ5TA50 214 aa1.51□□□□□ -2.17
GPN3-209ENST00000551079 STEAP4Q687X5 459 aa1.51□□□□□ -2.17
GPN3-209ENST00000551079 AMMECR1LQ6DCA0 310 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms