RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 ZNF670-ZNF695F2Z2N8 137 aa8.13□□□□□ -1.11
HDAC7-229ENST00000549883 LOC110117498-PIK3R3F6TDL0 507 aa8.13□□□□□ -1.11
HDAC7-229ENST00000549883 P2RY10O00398 339 aa8.13□□□□□ -1.11
HDAC7-229ENST00000549883 ADAM20O43506 726 aa8.13□□□□□ -1.11
HDAC7-229ENST00000549883 TCF21O43680 179 aa8.13□□□□□ -1.11
HDAC7-229ENST00000549883 ENTPD6O75354 484 aa8.13□□□□□ -1.11
HDAC7-229ENST00000549883 ZNF254O75437 659 aa8.13□□□□□ -1.11
HDAC7-229ENST00000549883 RHBDL1O75783 438 aa8.13□□□□□ -1.11
HDAC7-229ENST00000549883 FSTL3O95633 263 aa8.13□□□□□ -1.11
HDAC7-229ENST00000549883 IGHV4-38-2P0DP08 117 aa8.13□□□□□ -1.11
HDAC7-229ENST00000549883 SELLP14151 372 aa8.13□□□□□ -1.11
HDAC7-229ENST00000549883 CFL1P23528 166 aaKnown RBP8.13□□□□□ -1.11
HDAC7-229ENST00000549883 DCTDP32321 178 aa8.13□□□□□ -1.11
HDAC7-229ENST00000549883 GNALP38405 381 aa8.13□□□□□ -1.11
HDAC7-229ENST00000549883 ALDH3A2P51648 485 aa8.13□□□□□ -1.11
HDAC7-229ENST00000549883 GPM6AP51674 278 aa8.13□□□□□ -1.11
HDAC7-229ENST00000549883 ZNF85Q03923 595 aa8.13□□□□□ -1.11
HDAC7-229ENST00000549883 ODF4Q2M2E3 257 aa8.13□□□□□ -1.11
HDAC7-229ENST00000549883 ZFP1Q6P2D0 407 aa8.13□□□□□ -1.11
HDAC7-229ENST00000549883 DEGS2Q6QHC5 323 aa8.13□□□□□ -1.11
HDAC7-229ENST00000549883 COMMD2Q86X83 199 aa8.13□□□□□ -1.11
HDAC7-229ENST00000549883 GID4Q8IVV7 300 aa8.13□□□□□ -1.11
HDAC7-229ENST00000549883 GALNT4Q8N4A0 578 aa8.13□□□□□ -1.11
HDAC7-229ENST00000549883 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.13□□□□□ -1.11
HDAC7-229ENST00000549883 SPERTQ8NA61 448 aa8.13□□□□□ -1.11
HDAC7-229ENST00000549883 PLPP7Q8NBV4 271 aa8.13□□□□□ -1.11
HDAC7-229ENST00000549883 SCCPDHQ8NBX0 429 aa8.13□□□□□ -1.11
HDAC7-229ENST00000549883 CSNK2A3Q8NEV1 391 aa8.13□□□□□ -1.11
HDAC7-229ENST00000549883 SEMA6DQ8NFY4 1073 aa8.13□□□□□ -1.11
HDAC7-229ENST00000549883 OR10H4Q8NGA5 316 aa8.13□□□□□ -1.11
HDAC7-229ENST00000549883 OR8B3Q8NGG8 313 aa8.13□□□□□ -1.11
HDAC7-229ENST00000549883 OR8J1Q8NGP2 316 aa8.13□□□□□ -1.11
HDAC7-229ENST00000549883 RAB40AQ8WXH6 277 aa8.13□□□□□ -1.11
HDAC7-229ENST00000549883 RNF170Q96K19 258 aa8.13□□□□□ -1.11
HDAC7-229ENST00000549883 HRASLS5Q96KN8 279 aa8.13□□□□□ -1.11
HDAC7-229ENST00000549883 OR8B2Q96RD0 313 aa8.13□□□□□ -1.11
HDAC7-229ENST00000549883 TLNRD1Q9H1K6 362 aa8.13□□□□□ -1.11
HDAC7-229ENST00000549883 ESM1Q9NQ30 184 aa8.13□□□□□ -1.11
HDAC7-229ENST00000549883 SNTG1Q9NSN8 517 aa8.13□□□□□ -1.11
HDAC7-229ENST00000549883 ZNF69Q9UC07 566 aa8.13□□□□□ -1.11
HDAC7-229ENST00000549883 OR5V1Q9UGF6 321 aa8.13□□□□□ -1.11
HDAC7-229ENST00000549883 WARS2Q9UGM6 360 aaKnown RBP8.13□□□□□ -1.11
HDAC7-229ENST00000549883 NUFIP1Q9UHK0 495 aaKnown RBP8.13□□□□□ -1.11
HDAC7-229ENST00000549883 NOP16Q9Y3C1 178 aaKnown RBP8.13□□□□□ -1.11
HDAC7-229ENST00000549883 AUP1Q9Y679 476 aa8.13□□□□□ -1.11
HDAC7-229ENST00000549883 R4GMQ9 66 aa8.13□□□□□ -1.11
HDAC7-229ENST00000549883 ZNF732B4DXR9 585 aa8.12□□□□□ -1.11
HDAC7-229ENST00000549883 ANKRD65E5RJM6 399 aa8.12□□□□□ -1.11
HDAC7-229ENST00000549883 DVL1O14640 695 aa8.12□□□□□ -1.11
HDAC7-229ENST00000549883 AKR7A2O43488 359 aa8.12□□□□□ -1.11
HDAC7-229ENST00000549883 GABRB1P18505 474 aa8.12□□□□□ -1.11
HDAC7-229ENST00000549883 GATA3P23771 443 aa8.12□□□□□ -1.11
HDAC7-229ENST00000549883 ZNF829Q3KNS6 432 aaPredicted RBP8.12□□□□□ -1.11
HDAC7-229ENST00000549883 TP53I3Q53FA7 332 aa8.12□□□□□ -1.11
HDAC7-229ENST00000549883 WDR38Q5JTN6 314 aa8.12□□□□□ -1.11
HDAC7-229ENST00000549883 BCL2L15Q5TBC7 163 aa8.12□□□□□ -1.11
HDAC7-229ENST00000549883 LIPNQ5VXI9 398 aa8.12□□□□□ -1.11
HDAC7-229ENST00000549883 TEX36Q5VZQ5 186 aa8.12□□□□□ -1.11
HDAC7-229ENST00000549883 MOB3CQ70IA8 216 aa8.12□□□□□ -1.11
HDAC7-229ENST00000549883 ZDHHC23Q8IYP9 409 aa8.12□□□□□ -1.11
HDAC7-229ENST00000549883 ELMOD2Q8IZ81 293 aa8.12□□□□□ -1.11
HDAC7-229ENST00000549883 PQLC1Q8N2U9 271 aa8.12□□□□□ -1.11
HDAC7-229ENST00000549883 FAM216BQ8N7L0 139 aa8.12□□□□□ -1.11
HDAC7-229ENST00000549883 YIPF7Q8N8F6 280 aa8.12□□□□□ -1.11
HDAC7-229ENST00000549883 SPATA3Q8NHX4 192 aa8.12□□□□□ -1.11
HDAC7-229ENST00000549883 NANPQ8TBE9 248 aa8.12□□□□□ -1.11
HDAC7-229ENST00000549883 RORBQ92753 470 aa8.12□□□□□ -1.11
HDAC7-229ENST00000549883 ZNF48Q96MX3 618 aaPredicted RBP8.12□□□□□ -1.11
HDAC7-229ENST00000549883 TECTBQ96PL2 329 aa8.12□□□□□ -1.11
HDAC7-229ENST00000549883 CCL13Q99616 98 aa8.12□□□□□ -1.11
HDAC7-229ENST00000549883 MICU1Q9BPX6 476 aa8.12□□□□□ -1.11
HDAC7-229ENST00000549883 RTL8AQ9BWD3 113 aa8.12□□□□□ -1.11
HDAC7-229ENST00000549883 RNPEPL1Q9HAU8 725 aa8.12□□□□□ -1.11
HDAC7-229ENST00000549883 GPR173Q9NS66 373 aa8.12□□□□□ -1.11
HDAC7-229ENST00000549883 CLN8Q9UBY8 286 aa8.12□□□□□ -1.11
HDAC7-229ENST00000549883 ENOPH1Q9UHY7 261 aa8.12□□□□□ -1.11
HDAC7-229ENST00000549883 OR52A1Q9UKL2 312 aa8.12□□□□□ -1.11
HDAC7-229ENST00000549883 PIGLQ9Y2B2 252 aa8.12□□□□□ -1.11
HDAC7-229ENST00000549883 MPC1Q9Y5U8 109 aa8.12□□□□□ -1.11
HDAC7-229ENST00000549883 TMEM14AQ9Y6G1 99 aa8.12□□□□□ -1.11
HDAC7-229ENST00000549883 TRAV38-1A0A0B4J264 116 aa8.11□□□□□ -1.11
HDAC7-229ENST00000549883 ZNF816-ZNF321PA0A0X1KG74 233 aa8.11□□□□□ -1.11
HDAC7-229ENST00000549883 KIR2DS1A0A191URI9 304 aa8.11□□□□□ -1.11
HDAC7-229ENST00000549883 ACOD1A6NK06 481 aa8.11□□□□□ -1.11
HDAC7-229ENST00000549883 ANXA2P2A6NMY6 339 aa8.11□□□□□ -1.11
HDAC7-229ENST00000549883 SRRM5B3KS81 715 aa8.11□□□□□ -1.11
HDAC7-229ENST00000549883 J3QRE1 110 aa8.11□□□□□ -1.11
HDAC7-229ENST00000549883 DLGAP1O14490 977 aa8.11□□□□□ -1.11
HDAC7-229ENST00000549883 BAG2O95816 211 aa8.11□□□□□ -1.11
HDAC7-229ENST00000549883 SFTPBP07988 381 aa8.11□□□□□ -1.11
HDAC7-229ENST00000549883 OR2T7P0C7T2 308 aa8.11□□□□□ -1.11
HDAC7-229ENST00000549883 KIR3DL2P43630 455 aa8.11□□□□□ -1.11
HDAC7-229ENST00000549883 MAP2K3P46734 347 aa8.11□□□□□ -1.11
HDAC7-229ENST00000549883 CDC42P60953 191 aa8.11□□□□□ -1.11
HDAC7-229ENST00000549883 FGF12P61328 243 aa8.11□□□□□ -1.11
HDAC7-229ENST00000549883 IL5RAQ01344 420 aa8.11□□□□□ -1.11
HDAC7-229ENST00000549883 PRB3Q04118 309 aaPredicted RBP8.11□□□□□ -1.11
HDAC7-229ENST00000549883 EGR3Q06889 387 aa8.11□□□□□ -1.11
HDAC7-229ENST00000549883 TUSC1Q2TAM9 212 aa8.11□□□□□ -1.11
HDAC7-229ENST00000549883 FAM76BQ5HYJ3 339 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms