RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 INSL4Q14641 139 aa17.98■□□□□ 0.47
VPS29-206ENST00000549578 FAM209AQ5JX71 171 aa17.98■□□□□ 0.47
VPS29-206ENST00000549578 PLCXD3Q63HM9 321 aa17.98■□□□□ 0.47
VPS29-206ENST00000549578 MOB3CQ70IA8 216 aa17.98■□□□□ 0.47
VPS29-206ENST00000549578 OR8S1Q8NH09 359 aa17.98■□□□□ 0.47
VPS29-206ENST00000549578 HPSE2Q8WWQ2 592 aa17.98■□□□□ 0.47
VPS29-206ENST00000549578 MUL1Q969V5 352 aa17.98■□□□□ 0.47
VPS29-206ENST00000549578 C10orf35Q96D05 121 aa17.98■□□□□ 0.47
VPS29-206ENST00000549578 ITPKCQ96DU7 683 aa17.98■□□□□ 0.47
VPS29-206ENST00000549578 OR2V2Q96R30 315 aa17.98■□□□□ 0.47
VPS29-206ENST00000549578 OR14A2Q96R54 314 aa17.98■□□□□ 0.47
VPS29-206ENST00000549578 DECR2Q9NUI1 292 aa17.98■□□□□ 0.47
VPS29-206ENST00000549578 BEX4Q9NWD9 120 aaPredicted RBP17.98■□□□□ 0.47
VPS29-206ENST00000549578 NOP16Q9Y3C1 178 aaKnown RBP17.98■□□□□ 0.47
VPS29-206ENST00000549578 ARID1AO14497 2285 aa17.98■□□□□ 0.47
VPS29-206ENST00000549578 MAGEA13PA6NCF6 341 aa17.98■□□□□ 0.47
VPS29-206ENST00000549578 ANXA2P2A6NMY6 339 aa17.98■□□□□ 0.47
VPS29-206ENST00000549578 CD55P08174 381 aa17.98■□□□□ 0.47
VPS29-206ENST00000549578 PAX1P15863 534 aa17.98■□□□□ 0.47
VPS29-206ENST00000549578 GP2P55259 537 aaKnown RBP17.98■□□□□ 0.47
VPS29-206ENST00000549578 ATP5J2P56134 94 aa17.98■□□□□ 0.47
VPS29-206ENST00000549578 MAB21L1Q13394 359 aa17.98■□□□□ 0.47
VPS29-206ENST00000549578 Q499Y3 187 aa17.98■□□□□ 0.47
VPS29-206ENST00000549578 SYT6Q5T7P8 510 aaPredicted RBP17.98■□□□□ 0.47
VPS29-206ENST00000549578 ITLN1Q8WWA0 313 aa17.98■□□□□ 0.47
VPS29-206ENST00000549578 NEU4Q8WWR8 484 aaPredicted RBP17.98■□□□□ 0.47
VPS29-206ENST00000549578 TMEM106AQ96A25 262 aa17.98■□□□□ 0.47
VPS29-206ENST00000549578 MBD6Q96DN6 1003 aa17.98■□□□□ 0.47
VPS29-206ENST00000549578 GSX2Q9BZM3 304 aa17.98■□□□□ 0.47
VPS29-206ENST00000549578 CHST5Q9GZS9 411 aa17.98■□□□□ 0.47
VPS29-206ENST00000549578 FGF23Q9GZV9 251 aaPredicted RBP17.98■□□□□ 0.47
VPS29-206ENST00000549578 SAP30LQ9HAJ7 183 aa17.98■□□□□ 0.47
VPS29-206ENST00000549578 VCX3AQ9NNX9 186 aa17.98■□□□□ 0.47
VPS29-206ENST00000549578 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.97■□□□□ 0.47
VPS29-206ENST00000549578 EFNA4P52798 201 aa17.97■□□□□ 0.47
VPS29-206ENST00000549578 UBE2V2Q15819 145 aa17.97■□□□□ 0.47
VPS29-206ENST00000549578 MS4A15Q8N5U1 240 aa17.97■□□□□ 0.47
VPS29-206ENST00000549578 PP6455Q8WZ26 134 aa17.97■□□□□ 0.47
VPS29-206ENST00000549578 OR5P3Q8WZ94 311 aa17.97■□□□□ 0.47
VPS29-206ENST00000549578 ORAI1Q96D31 301 aa17.97■□□□□ 0.47
VPS29-206ENST00000549578 MEGF10Q96KG7 1140 aa17.97■□□□□ 0.47
VPS29-206ENST00000549578 EGLN1Q9GZT9 426 aa17.97■□□□□ 0.47
VPS29-206ENST00000549578 CXXC4Q9H2H0 198 aa17.97■□□□□ 0.47
VPS29-206ENST00000549578 IL19Q9UHD0 177 aa17.97■□□□□ 0.47
VPS29-206ENST00000549578 SF3B6Q9Y3B4 125 aaKnown RBP17.97■□□□□ 0.47
VPS29-206ENST00000549578 LOC100289279A0A1B0GTE1 492 aa17.96■□□□□ 0.47
VPS29-206ENST00000549578 A0A1W2PPK0 400 aa17.96■□□□□ 0.47
VPS29-206ENST00000549578 F12P00748 615 aaPredicted RBP17.96■□□□□ 0.47
VPS29-206ENST00000549578 CD2P06729 351 aa17.96■□□□□ 0.47
VPS29-206ENST00000549578 HNRNPA0Q13151 305 aaKnown RBP17.96■□□□□ 0.47
VPS29-206ENST00000549578 PARP16Q8N5Y8 322 aa17.96■□□□□ 0.47
VPS29-206ENST00000549578 NPRL2Q8WTW4 380 aa17.96■□□□□ 0.47
VPS29-206ENST00000549578 HIST1H2AAQ96QV6 131 aa17.96■□□□□ 0.47
VPS29-206ENST00000549578 MICU1Q9BPX6 476 aa17.96■□□□□ 0.47
VPS29-206ENST00000549578 ABCB9Q9NP78 766 aa17.96■□□□□ 0.47
VPS29-206ENST00000549578 NDUFB11Q9NX14 153 aa17.96■□□□□ 0.47
VPS29-206ENST00000549578 CHD3Q12873 2000 aaKnown RBP17.96■□□□□ 0.46
VPS29-206ENST00000549578 ZNF879B4DU55 563 aa17.95■□□□□ 0.46
VPS29-206ENST00000549578 CCRL2O00421 344 aa17.95■□□□□ 0.46
VPS29-206ENST00000549578 GATBO75879 557 aaKnown RBP17.95■□□□□ 0.46
VPS29-206ENST00000549578 SERPINA3P01011 423 aa17.95■□□□□ 0.46
VPS29-206ENST00000549578 GABRA5P31644 462 aa17.95■□□□□ 0.46
VPS29-206ENST00000549578 THBS2P35442 1172 aa17.95■□□□□ 0.46
VPS29-206ENST00000549578 RBMXP38159 391 aaKnown RBP17.95■□□□□ 0.46
VPS29-206ENST00000549578 CD200P41217 278 aa17.95■□□□□ 0.46
VPS29-206ENST00000549578 SRP9P49458 86 aaKnown RBP17.95■□□□□ 0.46
VPS29-206ENST00000549578 TESK1Q15569 626 aa17.95■□□□□ 0.46
VPS29-206ENST00000549578 CEACAM21Q3KPI0 293 aa17.95■□□□□ 0.46
VPS29-206ENST00000549578 ACSM3Q53FZ2 586 aa17.95■□□□□ 0.46
VPS29-206ENST00000549578 PRAMEF6Q5VXH4 476 aa17.95■□□□□ 0.46
VPS29-206ENST00000549578 ASPHD2Q6ICH7 369 aa17.95■□□□□ 0.46
VPS29-206ENST00000549578 WDR86Q86TI4 376 aa17.95■□□□□ 0.46
VPS29-206ENST00000549578 SERPINA12Q8IW75 414 aa17.95■□□□□ 0.46
VPS29-206ENST00000549578 SPERTQ8NA61 448 aa17.95■□□□□ 0.46
VPS29-206ENST00000549578 OR13C9Q8NGT0 318 aa17.95■□□□□ 0.46
VPS29-206ENST00000549578 RNF170Q96K19 258 aa17.95■□□□□ 0.46
VPS29-206ENST00000549578 RTL8AQ9BWD3 113 aa17.95■□□□□ 0.46
VPS29-206ENST00000549578 MRPS26Q9BYN8 205 aaKnown RBP17.95■□□□□ 0.46
VPS29-206ENST00000549578 TAS2R4Q9NYW5 299 aa17.95■□□□□ 0.46
VPS29-206ENST00000549578 TREM2Q9NZC2 230 aa17.95■□□□□ 0.46
VPS29-206ENST00000549578 LYNX1G3V0Z9 82 aa17.94■□□□□ 0.46
VPS29-206ENST00000549578 SSX4O60224 188 aa17.94■□□□□ 0.46
VPS29-206ENST00000549578 CDC14BO60729 498 aa17.94■□□□□ 0.46
VPS29-206ENST00000549578 GRPP07492 148 aa17.94■□□□□ 0.46
VPS29-206ENST00000549578 LYNX1P0DP58 116 aa17.94■□□□□ 0.46
VPS29-206ENST00000549578 DAOP14920 347 aa17.94■□□□□ 0.46
VPS29-206ENST00000549578 GPM6AP51674 278 aa17.94■□□□□ 0.46
VPS29-206ENST00000549578 UTS2BQ765I0 119 aa17.94■□□□□ 0.46
VPS29-206ENST00000549578 TGIF2LYQ8IUE0 185 aa17.94■□□□□ 0.46
VPS29-206ENST00000549578 TRMT10AQ8TBZ6 339 aaKnown RBP17.94■□□□□ 0.46
VPS29-206ENST00000549578 DERL3Q96Q80 235 aa17.94■□□□□ 0.46
VPS29-206ENST00000549578 ZCCHC4Q9H5U6 513 aa17.94■□□□□ 0.46
VPS29-206ENST00000549578 C14orf119Q9NWQ9 140 aa17.94■□□□□ 0.46
VPS29-206ENST00000549578 CACNG2Q9Y698 323 aa17.94■□□□□ 0.46
VPS29-206ENST00000549578 TRBV5-7A0A0A0MS05 114 aa17.93■□□□□ 0.46
VPS29-206ENST00000549578 IGKV1-9A0A0C4DH69 117 aa17.93■□□□□ 0.46
VPS29-206ENST00000549578 JUNBP17275 347 aaPredicted RBP17.93■□□□□ 0.46
VPS29-206ENST00000549578 FABP5Q01469 135 aa17.93■□□□□ 0.46
VPS29-206ENST00000549578 MPPED2Q15777 294 aa17.93■□□□□ 0.46
VPS29-206ENST00000549578 FAM27D1Q5T7N8 215 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms