RNA–Protein interactions for RNA: ENST00000549417.5

LIN7A-202, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 905 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-202ENST00000549417 PMS2P11Q13670 270 aa5.3□□□□□ -1.56
LIN7A-202ENST00000549417 KRTAP27-1Q3LI81 207 aa5.3□□□□□ -1.56
LIN7A-202ENST00000549417 GLYATL3Q5SZD4 288 aa5.3□□□□□ -1.56
LIN7A-202ENST00000549417 ZNF626Q68DY1 528 aa5.3□□□□□ -1.56
LIN7A-202ENST00000549417 ZNF770Q6IQ21 691 aaPredicted RBP5.3□□□□□ -1.56
LIN7A-202ENST00000549417 ACP7Q6ZNF0 438 aa5.3□□□□□ -1.56
LIN7A-202ENST00000549417 TMPRSS11FQ6ZWK6 438 aa5.3□□□□□ -1.56
LIN7A-202ENST00000549417 C16orf82Q7Z2V1 217 aa5.3□□□□□ -1.56
LIN7A-202ENST00000549417 CPLX4Q7Z7G2 160 aa5.3□□□□□ -1.56
LIN7A-202ENST00000549417 LRRC75AQ8NAA5 344 aa5.3□□□□□ -1.56
LIN7A-202ENST00000549417 GJC3Q8NFK1 279 aa5.3□□□□□ -1.56
LIN7A-202ENST00000549417 OR13D1Q8NGV5 346 aa5.3□□□□□ -1.56
LIN7A-202ENST00000549417 OR2T27Q8NH04 317 aa5.3□□□□□ -1.56
LIN7A-202ENST00000549417 OR51A7Q8NH64 312 aa5.3□□□□□ -1.56
LIN7A-202ENST00000549417 CHPT1Q8WUD6 406 aa5.3□□□□□ -1.56
LIN7A-202ENST00000549417 RPL3LQ92901 407 aaKnown RBP5.3□□□□□ -1.56
LIN7A-202ENST00000549417 ST6GALNAC6Q969X2 333 aa5.3□□□□□ -1.56
LIN7A-202ENST00000549417 MPP4Q96JB8 637 aa5.3□□□□□ -1.56
LIN7A-202ENST00000549417 RBM14Q96PK6 669 aaKnown RBP5.3□□□□□ -1.56
LIN7A-202ENST00000549417 ATF6BQ99941 703 aa5.3□□□□□ -1.56
LIN7A-202ENST00000549417 ST6GALNAC5Q9BVH7 336 aa5.3□□□□□ -1.56
LIN7A-202ENST00000549417 PAIP1Q9H074 479 aaKnown RBP5.3□□□□□ -1.56
LIN7A-202ENST00000549417 DNTTIP1Q9H147 329 aa5.3□□□□□ -1.56
LIN7A-202ENST00000549417 YY1AP1Q9H869 796 aa5.3□□□□□ -1.56
LIN7A-202ENST00000549417 NLKQ9UBE8 527 aa5.3□□□□□ -1.56
LIN7A-202ENST00000549417 TNCP24821 2201 aa5.29□□□□□ -1.56
LIN7A-202ENST00000549417 A0A1W2PPH5 198 aa5.29□□□□□ -1.56
LIN7A-202ENST00000549417 PRSS37A4D1T9 235 aa5.29□□□□□ -1.56
LIN7A-202ENST00000549417 ANKRD30BLA7E2S9 258 aa5.29□□□□□ -1.56
LIN7A-202ENST00000549417 POLR3GO15318 223 aaPredicted RBP5.29□□□□□ -1.56
LIN7A-202ENST00000549417 OR5F1O95221 314 aa5.29□□□□□ -1.56
LIN7A-202ENST00000549417 BRI3O95415 125 aa5.29□□□□□ -1.56
LIN7A-202ENST00000549417 SHBGP04278 402 aa5.29□□□□□ -1.56
LIN7A-202ENST00000549417 IL6P05231 212 aa5.29□□□□□ -1.56
LIN7A-202ENST00000549417 PSG2P11465 335 aa5.29□□□□□ -1.56
LIN7A-202ENST00000549417 CD247P20963 164 aa5.29□□□□□ -1.56
LIN7A-202ENST00000549417 MDH1P40925 334 aaKnown RBP5.29□□□□□ -1.56
LIN7A-202ENST00000549417 HIST1H3AP68431 136 aa5.29□□□□□ -1.56
LIN7A-202ENST00000549417 KIR2DS1Q14954 304 aa5.29□□□□□ -1.56
LIN7A-202ENST00000549417 SNAPC1Q16533 368 aa5.29□□□□□ -1.56
LIN7A-202ENST00000549417 MESTQ5EB52 335 aa5.29□□□□□ -1.56
LIN7A-202ENST00000549417 HIST2H3PS2Q5TEC6 136 aa5.29□□□□□ -1.56
LIN7A-202ENST00000549417 HIST2H3AQ71DI3 136 aa5.29□□□□□ -1.56
LIN7A-202ENST00000549417 HAPLN4Q86UW8 402 aa5.29□□□□□ -1.56
LIN7A-202ENST00000549417 LINC00471Q8N535 108 aa5.29□□□□□ -1.56
LIN7A-202ENST00000549417 OR9I1Q8NGQ6 314 aa5.29□□□□□ -1.56
LIN7A-202ENST00000549417 EPS8L3Q8TE67 593 aaKnown RBP5.29□□□□□ -1.56
LIN7A-202ENST00000549417 TMEM239Q8WW34 195 aa5.29□□□□□ -1.56
LIN7A-202ENST00000549417 Q96M85 177 aa5.29□□□□□ -1.56
LIN7A-202ENST00000549417 ZIM3Q96PE6 472 aa5.29□□□□□ -1.56
LIN7A-202ENST00000549417 NABP2Q9BQ15 211 aa5.29□□□□□ -1.56
LIN7A-202ENST00000549417 SYT4Q9H2B2 425 aa5.29□□□□□ -1.56
LIN7A-202ENST00000549417 SP140LQ9H930 580 aa5.29□□□□□ -1.56
LIN7A-202ENST00000549417 TBC1D23Q9NUY8 699 aa5.29□□□□□ -1.56
LIN7A-202ENST00000549417 C19orf73Q9NVV2 129 aa5.29□□□□□ -1.56
LIN7A-202ENST00000549417 GRHPRQ9UBQ7 328 aa5.29□□□□□ -1.56
LIN7A-202ENST00000549417 CXorf65A6NEN9 183 aa5.28□□□□□ -1.56
LIN7A-202ENST00000549417 LINC01548A6NM66 108 aa5.28□□□□□ -1.56
LIN7A-202ENST00000549417 M0R135 149 aa5.28□□□□□ -1.56
LIN7A-202ENST00000549417 XKRYO14609 159 aa5.28□□□□□ -1.56
LIN7A-202ENST00000549417 SLC22A2O15244 555 aa5.28□□□□□ -1.56
LIN7A-202ENST00000549417 KHDRBS3O75525 346 aaKnown RBP5.28□□□□□ -1.56
LIN7A-202ENST00000549417 IGHV1-8P0DP01 117 aa5.28□□□□□ -1.56
LIN7A-202ENST00000549417 SLC2A1P11166 492 aa5.28□□□□□ -1.56
LIN7A-202ENST00000549417 IFI30P13284 250 aa5.28□□□□□ -1.56
LIN7A-202ENST00000549417 TNFRSF1BP20333 461 aa5.28□□□□□ -1.56
LIN7A-202ENST00000549417 GLRA1P23415 457 aa5.28□□□□□ -1.56
LIN7A-202ENST00000549417 GNALP38405 381 aa5.28□□□□□ -1.56
LIN7A-202ENST00000549417 SLC9A3P48764 834 aa5.28□□□□□ -1.56
LIN7A-202ENST00000549417 MTNR1BP49286 362 aa5.28□□□□□ -1.56
LIN7A-202ENST00000549417 INSL3P51460 131 aa5.28□□□□□ -1.56
LIN7A-202ENST00000549417 DLX6P56179 175 aa5.28□□□□□ -1.56
LIN7A-202ENST00000549417 TPTEP56180 551 aa5.28□□□□□ -1.56
LIN7A-202ENST00000549417 TAS2R41P59536 307 aa5.28□□□□□ -1.56
LIN7A-202ENST00000549417 SLC35B1P78383 322 aa5.28□□□□□ -1.56
LIN7A-202ENST00000549417 SPIBQ01892 262 aa5.28□□□□□ -1.56
LIN7A-202ENST00000549417 TNP2Q05952 138 aa5.28□□□□□ -1.56
LIN7A-202ENST00000549417 GABPB1Q06547 395 aaPredicted RBP5.28□□□□□ -1.56
LIN7A-202ENST00000549417 KRT72Q14CN4 511 aa5.28□□□□□ -1.56
LIN7A-202ENST00000549417 RFX4Q33E94 735 aa5.28□□□□□ -1.56
LIN7A-202ENST00000549417 RNLSQ5VYX0 342 aa5.28□□□□□ -1.56
LIN7A-202ENST00000549417 KCTD8Q6ZWB6 473 aa5.28□□□□□ -1.56
LIN7A-202ENST00000549417 MAVSQ7Z434 540 aa5.28□□□□□ -1.56
LIN7A-202ENST00000549417 TSEN54Q7Z6J9 526 aaKnown RBP5.28□□□□□ -1.56
LIN7A-202ENST00000549417 MSRB3Q8IXL7 192 aa5.28□□□□□ -1.56
LIN7A-202ENST00000549417 CNPY4Q8N129 248 aa5.28□□□□□ -1.56
LIN7A-202ENST00000549417 OR6V1Q8N148 313 aa5.28□□□□□ -1.56
LIN7A-202ENST00000549417 Q8N1Y9 231 aa5.28□□□□□ -1.56
LIN7A-202ENST00000549417 OR11H1Q8NG94 326 aa5.28□□□□□ -1.56
LIN7A-202ENST00000549417 OR11H6Q8NGC7 330 aa5.28□□□□□ -1.56
LIN7A-202ENST00000549417 GTF2H4Q92759 462 aa5.28□□□□□ -1.56
LIN7A-202ENST00000549417 ZNF799Q96GE5 643 aa5.28□□□□□ -1.56
LIN7A-202ENST00000549417 APOPT1Q96IL0 206 aa5.28□□□□□ -1.56
LIN7A-202ENST00000549417 PKNOX2Q96KN3 472 aa5.28□□□□□ -1.56
LIN7A-202ENST00000549417 ZNF570Q96NI8 536 aa5.28□□□□□ -1.56
LIN7A-202ENST00000549417 TSSK2Q96PF2 358 aa5.28□□□□□ -1.56
LIN7A-202ENST00000549417 C20orf27Q9GZN8 174 aa5.28□□□□□ -1.56
LIN7A-202ENST00000549417 NUAK2Q9H093 628 aa5.28□□□□□ -1.56
LIN7A-202ENST00000549417 C1orf21Q9H246 121 aa5.28□□□□□ -1.56
LIN7A-202ENST00000549417 IKZF5Q9H5V7 419 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms