RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 SAMHD1Q9Y3Z3 626 aaKnown RBP0.84□□□□□ -2.27
CEP290-204ENST00000547926 EP300Q09472 2414 aaPredicted RBP0.84□□□□□ -2.28
CEP290-204ENST00000547926 PRRC2CQ9Y520 2896 aaKnown RBP0.84□□□□□ -2.28
CEP290-204ENST00000547926 DMXL2Q8TDJ6 3036 aa0.84□□□□□ -2.28
CEP290-204ENST00000547926 C2orf16Q68DN1 1984 aa0.84□□□□□ -2.28
CEP290-204ENST00000547926 ITPR2Q14571 2701 aa0.84□□□□□ -2.28
CEP290-204ENST00000547926 OR7C2O60412 319 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 GATBO75879 557 aaKnown RBP0.83□□□□□ -2.28
CEP290-204ENST00000547926 TGM6O95932 706 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 UQCRFS1P1P0C7P4 283 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 PGA4P0DJD7 388 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 PGA3P0DJD8 388 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 PGA5P0DJD9 388 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 RAB7AP51149 207 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 RAB9AP51151 201 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 ACTR3P61158 418 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 FAM228AQ86W67 206 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 GTPBP8Q8N3Z3 284 aaPredicted RBP0.83□□□□□ -2.28
CEP290-204ENST00000547926 OR56B2PQ8NGI1 322 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 OR4A4PQ8NGN8 299 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 OR5K2Q8NHB8 316 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 LYPD6BQ8NI32 183 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 SLC2A14Q8TDB8 520 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 ELMO1Q92556 727 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 PKMYT1Q99640 499 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 NT5C3AQ9H0P0 336 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 TMEM38AQ9H6F2 299 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 RRAGDQ9NQL2 400 aaPredicted RBP0.83□□□□□ -2.28
CEP290-204ENST00000547926 DCAF16Q9NXF7 216 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 IL37Q9NZH6 218 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 CHD7Q9P2D1 2997 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 CUX1P39880 1505 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 ZNF608Q9ULD9 1512 aaPredicted RBP0.83□□□□□ -2.28
CEP290-204ENST00000547926 RIF1Q5UIP0 2472 aaKnown RBP0.83□□□□□ -2.28
CEP290-204ENST00000547926 MRC2Q9UBG0 1479 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP0.83□□□□□ -2.28
CEP290-204ENST00000547926 ADGRG4Q8IZF6 3080 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 IGHV3OR16-9A0A0B4J2B5 98 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 C3orf84H3BNL1 204 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 SLC9A3R1O14745 358 aaPredicted RBP0.83□□□□□ -2.28
CEP290-204ENST00000547926 TAAR5O14804 337 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 HSPD1P10809 573 aaKnown RBP0.83□□□□□ -2.28
CEP290-204ENST00000547926 CTRB1P17538 263 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 USF1P22415 310 aaPredicted RBP0.83□□□□□ -2.28
CEP290-204ENST00000547926 ZNF121P58317 390 aaPredicted RBP0.83□□□□□ -2.28
CEP290-204ENST00000547926 ZNF829Q3KNS6 432 aaPredicted RBP0.83□□□□□ -2.28
CEP290-204ENST00000547926 KRTAP13-4Q3LI77 160 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 PYDC2Q56P42 97 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 XKR7Q5GH72 579 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 OPN5Q6U736 354 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 FAM131AQ6UXB0 335 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 RTL4Q6ZR62 310 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 NT5DC3Q86UY8 548 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 SLC22A9Q8IVM8 553 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 DRAM1Q8N682 238 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 LINC00469Q8N7U9 141 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 C19orf18Q8NEA5 215 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 RXFP4Q8TDU9 374 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 OR4K3Q96R72 315 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 UQCC2Q9BRT2 126 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 SLC39A1Q9NY26 324 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 TAS2R1Q9NYW7 299 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 RWDD2AQ9UIY3 292 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 PITPNC1Q9UKF7 332 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 SVEP1Q4LDE5 3571 aa0.83□□□□□ -2.28
CEP290-204ENST00000547926 COL22A1Q8NFW1 1626 aaPredicted RBP0.82□□□□□ -2.28
CEP290-204ENST00000547926 PPRC1Q5VV67 1664 aaKnown RBP0.82□□□□□ -2.28
CEP290-204ENST00000547926 TRBV9A0A0B4J1U6 114 aa0.82□□□□□ -2.28
CEP290-204ENST00000547926 HEATR9A2RTY3 570 aa0.82□□□□□ -2.28
CEP290-204ENST00000547926 NME4O00746 187 aa0.82□□□□□ -2.28
CEP290-204ENST00000547926 NDUFAB1O14561 156 aa0.82□□□□□ -2.28
CEP290-204ENST00000547926 FSTL3O95633 263 aa0.82□□□□□ -2.28
CEP290-204ENST00000547926 RRM2P31350 389 aa0.82□□□□□ -2.28
CEP290-204ENST00000547926 RAB10P61026 200 aa0.82□□□□□ -2.28
CEP290-204ENST00000547926 ILKQ13418 452 aa0.82□□□□□ -2.28
CEP290-204ENST00000547926 PRAMEF20Q5VT98 475 aa0.82□□□□□ -2.28
CEP290-204ENST00000547926 AKR7LQ8NHP1 331 aa0.82□□□□□ -2.28
CEP290-204ENST00000547926 PHOSPHO2Q8TCD6 241 aa0.82□□□□□ -2.28
CEP290-204ENST00000547926 STACQ99469 402 aa0.82□□□□□ -2.28
CEP290-204ENST00000547926 KCNS3Q9BQ31 491 aa0.82□□□□□ -2.28
CEP290-204ENST00000547926 DYRK4Q9NR20 520 aa0.82□□□□□ -2.28
CEP290-204ENST00000547926 RGS18Q9NS28 235 aa0.82□□□□□ -2.28
CEP290-204ENST00000547926 YARS2Q9Y2Z4 477 aaKnown RBP0.82□□□□□ -2.28
CEP290-204ENST00000547926 NRKQ7Z2Y5 1582 aa0.82□□□□□ -2.28
CEP290-204ENST00000547926 ATAD2BQ9ULI0 1458 aa0.82□□□□□ -2.28
CEP290-204ENST00000547926 TENM3Q9P273 2699 aa0.82□□□□□ -2.28
CEP290-204ENST00000547926 APCP25054 2843 aa0.82□□□□□ -2.28
CEP290-204ENST00000547926 HIVEP1P15822 2718 aa0.82□□□□□ -2.28
CEP290-204ENST00000547926 OR2AG2A6NM03 316 aa0.82□□□□□ -2.28
CEP290-204ENST00000547926 M0R1X1 148 aa0.82□□□□□ -2.28
CEP290-204ENST00000547926 AP3B1O00203 1094 aa0.82□□□□□ -2.28
CEP290-204ENST00000547926 CPLX1O14810 134 aa0.82□□□□□ -2.28
CEP290-204ENST00000547926 RNF13O43567 381 aa0.82□□□□□ -2.28
CEP290-204ENST00000547926 SCELO95171 688 aa0.82□□□□□ -2.28
CEP290-204ENST00000547926 FGFR1OPO95684 399 aaKnown RBP0.82□□□□□ -2.28
CEP290-204ENST00000547926 LSM8O95777 96 aaKnown RBP0.82□□□□□ -2.28
CEP290-204ENST00000547926 NELFEP18615 380 aaKnown RBP0.82□□□□□ -2.28
CEP290-204ENST00000547926 RAB4AP20338 218 aa0.82□□□□□ -2.28
CEP290-204ENST00000547926 HTR1DP28221 377 aa0.82□□□□□ -2.28
CEP290-204ENST00000547926 GGT2P36268 569 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms