RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 ITGB3BPQ13352 177 aaPredicted RBP3.17□□□□□ -1.9
SCAF11-210ENST00000547654 DYNC1I2Q13409 638 aaKnown RBP3.17□□□□□ -1.9
SCAF11-210ENST00000547654 FZD2Q14332 565 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 ACTL10Q5JWF8 245 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 THEM4Q5T1C6 240 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 MARC1Q5VT66 337 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 AP1ARQ63HQ0 302 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 OR2T5Q6IEZ7 315 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 FAM151BQ6UXP7 276 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 NPSR1Q6W5P4 371 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 TPGS1Q6ZTW0 290 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 H2AFVQ71UI9 128 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 COX15Q7KZN9 410 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 TMEM179BQ7Z7N9 219 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 SLC30A8Q8IWU4 369 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 TMEM61Q8N0U2 210 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 CA13Q8N1Q1 262 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 ARRDC1Q8N5I2 433 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 ZNF738Q8NE65 137 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 ATP6V1C2Q8NEY4 427 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 OR51G1Q8NGK1 321 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 OR5AR1Q8NGP9 310 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 OR2L8Q8NGY9 312 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 OR2G3Q8NGZ4 309 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 OR2T29Q8NH02 315 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 GTSF1Q8WW33 167 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 FAM151AQ8WW52 585 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 TMEM234Q8WY98 164 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 ING5Q8WYH8 240 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 ITFG2Q969R8 447 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 SGTBQ96EQ0 304 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 VSIG2Q96IQ7 327 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 ZNF681Q96N22 645 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 CHRNA10Q9GZZ6 450 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 SLC38A1Q9H2H9 487 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 ZNF442Q9H7R0 627 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 TMBIM4Q9HC24 238 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 RAB23Q9ULC3 237 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 SCML1Q9UN30 329 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 OR51B2Q9Y5P1 312 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 CRB1P82279 1406 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 EEA1Q15075 1411 aa3.17□□□□□ -1.9
SCAF11-210ENST00000547654 USP42Q9H9J4 1324 aaKnown RBP3.17□□□□□ -1.9
SCAF11-210ENST00000547654 CHD8Q9HCK8 2581 aa3.16□□□□□ -1.9
SCAF11-210ENST00000547654 ZNF593O00488 134 aaPredicted RBP3.16□□□□□ -1.9
SCAF11-210ENST00000547654 PLPP3O14495 311 aa3.16□□□□□ -1.9
SCAF11-210ENST00000547654 XKRYO14609 159 aa3.16□□□□□ -1.9
SCAF11-210ENST00000547654 COCHO43405 550 aa3.16□□□□□ -1.9
SCAF11-210ENST00000547654 MYO1DO94832 1006 aa3.16□□□□□ -1.9
SCAF11-210ENST00000547654 RCBTB2O95199 551 aa3.16□□□□□ -1.9
SCAF11-210ENST00000547654 RAB3DO95716 219 aa3.16□□□□□ -1.9
SCAF11-210ENST00000547654 GIPP09681 153 aaPredicted RBP3.16□□□□□ -1.9
SCAF11-210ENST00000547654 PGA5P0DJD9 388 aa3.16□□□□□ -1.9
SCAF11-210ENST00000547654 ERGP11308 486 aa3.16□□□□□ -1.9
SCAF11-210ENST00000547654 GABRG2P18507 467 aa3.16□□□□□ -1.9
SCAF11-210ENST00000547654 RAB3BP20337 219 aa3.16□□□□□ -1.9
SCAF11-210ENST00000547654 MYL9P24844 172 aa3.16□□□□□ -1.9
SCAF11-210ENST00000547654 TEAD1P28347 426 aa3.16□□□□□ -1.9
SCAF11-210ENST00000547654 GNRHRP30968 328 aa3.16□□□□□ -1.9
SCAF11-210ENST00000547654 CEACAM3P40198 252 aa3.16□□□□□ -1.9
SCAF11-210ENST00000547654 RGS6P49758 472 aa3.16□□□□□ -1.9
SCAF11-210ENST00000547654 EMP2P54851 167 aa3.16□□□□□ -1.9
SCAF11-210ENST00000547654 OR2B8PP59922 312 aa3.16□□□□□ -1.9
SCAF11-210ENST00000547654 MRPS15P82914 257 aaKnown RBP3.16□□□□□ -1.9
SCAF11-210ENST00000547654 FLOT2Q14254 428 aa3.16□□□□□ -1.9
SCAF11-210ENST00000547654 ZNF266Q14584 549 aa3.16□□□□□ -1.9
SCAF11-210ENST00000547654 GPNMBQ14956 572 aa3.16□□□□□ -1.9
SCAF11-210ENST00000547654 BSXQ3C1V8 233 aa3.16□□□□□ -1.9
SCAF11-210ENST00000547654 RNLSQ5VYX0 342 aa3.16□□□□□ -1.9
SCAF11-210ENST00000547654 METTL7BQ6UX53 244 aa3.16□□□□□ -1.9
SCAF11-210ENST00000547654 ZNF677Q86XU0 584 aa3.16□□□□□ -1.9
SCAF11-210ENST00000547654 BBS7Q8IWZ6 715 aa3.16□□□□□ -1.9
SCAF11-210ENST00000547654 BOD1L2Q8IYS8 172 aa3.16□□□□□ -1.9
SCAF11-210ENST00000547654 POM121L12Q8N7R1 296 aa3.16□□□□□ -1.9
SCAF11-210ENST00000547654 ZNF565Q8N9K5 539 aa3.16□□□□□ -1.9
SCAF11-210ENST00000547654 MDS2Q8NDY4 140 aa3.16□□□□□ -1.9
SCAF11-210ENST00000547654 FAM222BQ8WU58 562 aa3.16□□□□□ -1.9
SCAF11-210ENST00000547654 PHF10Q8WUB8 498 aaKnown RBP3.16□□□□□ -1.9
SCAF11-210ENST00000547654 ADTRPQ96IZ2 230 aa3.16□□□□□ -1.9
SCAF11-210ENST00000547654 PORCNQ9H237 461 aa3.16□□□□□ -1.9
SCAF11-210ENST00000547654 WDR55Q9H6Y2 383 aaPredicted RBP3.16□□□□□ -1.9
SCAF11-210ENST00000547654 ISYNA1Q9NPH2 558 aa3.16□□□□□ -1.9
SCAF11-210ENST00000547654 CCL28Q9NRJ3 127 aa3.16□□□□□ -1.9
SCAF11-210ENST00000547654 SLC25A37Q9NYZ2 338 aa3.16□□□□□ -1.9
SCAF11-210ENST00000547654 MAT2BQ9NZL9 334 aa3.16□□□□□ -1.9
SCAF11-210ENST00000547654 KLF12Q9Y4X4 402 aa3.16□□□□□ -1.9
SCAF11-210ENST00000547654 LTN1O94822 1766 aa3.15□□□□□ -1.9
SCAF11-210ENST00000547654 LAMB2P55268 1798 aa3.15□□□□□ -1.9
SCAF11-210ENST00000547654 ZDBF2Q9HCK1 2354 aa3.15□□□□□ -1.9
SCAF11-210ENST00000547654 PRAMEF26H0Y7S4 382 aa3.15□□□□□ -1.91
SCAF11-210ENST00000547654 H7C1H1 209 aa3.15□□□□□ -1.91
SCAF11-210ENST00000547654 LIN7AO14910 233 aaPredicted RBP3.15□□□□□ -1.91
SCAF11-210ENST00000547654 TTC4O95801 387 aa3.15□□□□□ -1.91
SCAF11-210ENST00000547654 IGHV3-23P01764 117 aa3.15□□□□□ -1.91
SCAF11-210ENST00000547654 KRT7P08729 469 aa3.15□□□□□ -1.91
SCAF11-210ENST00000547654 OR5AL1P0C617 328 aa3.15□□□□□ -1.91
SCAF11-210ENST00000547654 PGA4P0DJD7 388 aa3.15□□□□□ -1.91
SCAF11-210ENST00000547654 PGA3P0DJD8 388 aa3.15□□□□□ -1.91
SCAF11-210ENST00000547654 LIPCP11150 499 aa3.15□□□□□ -1.91
SCAF11-210ENST00000547654 PSMB1P20618 241 aaKnown RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms