RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 GUCA2AQ02747 115 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 SPANXN5Q5MJ07 72 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 EIF4E3Q8N5X7 224 aaKnown RBP11.53□□□□□ -0.56
PTCH1-212ENST00000546744 RBMXL3Q8N7X1 1067 aaKnown RBP11.53□□□□□ -0.56
PTCH1-212ENST00000546744 SLC46A2Q9BY10 475 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 PBOV1Q9GZY1 135 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 CALHM2Q9HA72 323 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 GNG12Q9UBI6 72 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 MYO9BQ13459 2157 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 XRCC2O43543 280 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 F11P03951 625 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 EN2P19622 333 aaPredicted RBP11.53□□□□□ -0.56
PTCH1-212ENST00000546744 FAM3BP58499 235 aaPredicted RBP11.53□□□□□ -0.56
PTCH1-212ENST00000546744 PAFAH1B2P68402 229 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 NHLH2Q02577 135 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 CEBPEQ15744 281 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 PIGTQ969N2 578 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 FBXO4Q9UKT5 387 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 A0A0G2JMZ2 1700 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 CD79AP11912 226 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 TMEM33P57088 247 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 PUSL1Q8N0Z8 303 aaKnown RBP11.53□□□□□ -0.56
PTCH1-212ENST00000546744 OR51E1Q8TCB6 317 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 OR10C1Q96KK4 312 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 GPR84Q9NQS5 396 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 KIAA1456Q9P272 454 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 ARL2-SNX15V9GYD0 113 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 PLXNA1Q9UIW2 1896 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 SRCAPQ6ZRS2 3230 aa11.53□□□□□ -0.56
PTCH1-212ENST00000546744 A0A0A6YYD5 115 aa11.52□□□□□ -0.56
PTCH1-212ENST00000546744 DDTP30046 118 aa11.52□□□□□ -0.56
PTCH1-212ENST00000546744 PABPC1L2AQ5JQF8 200 aa11.52□□□□□ -0.56
PTCH1-212ENST00000546744 RPS4Y2Q8TD47 263 aa11.52□□□□□ -0.56
PTCH1-212ENST00000546744 ARRDC3Q96B67 414 aa11.52□□□□□ -0.56
PTCH1-212ENST00000546744 NEIL1Q96FI4 390 aaPredicted RBP11.52□□□□□ -0.56
PTCH1-212ENST00000546744 MFRPQ9BY79 579 aa11.52□□□□□ -0.56
PTCH1-212ENST00000546744 SLCO1C1Q9NYB5 712 aa11.52□□□□□ -0.56
PTCH1-212ENST00000546744 SSUH2Q9Y2M2 353 aa11.52□□□□□ -0.56
PTCH1-212ENST00000546744 LSM2Q9Y333 95 aaKnown RBP11.52□□□□□ -0.56
PTCH1-212ENST00000546744 DRD1P21728 446 aa11.52□□□□□ -0.57
PTCH1-212ENST00000546744 TMEM176BQ3YBM2 270 aaPredicted RBP11.52□□□□□ -0.57
PTCH1-212ENST00000546744 TRMT12Q53H54 448 aaKnown RBP11.52□□□□□ -0.57
PTCH1-212ENST00000546744 ETFBKMTQ8IXQ9 262 aa11.52□□□□□ -0.57
PTCH1-212ENST00000546744 MEGF10Q96KG7 1140 aa11.52□□□□□ -0.57
PTCH1-212ENST00000546744 KCNK7Q9Y2U2 307 aa11.52□□□□□ -0.57
PTCH1-212ENST00000546744 DOK2O60496 412 aa11.52□□□□□ -0.57
PTCH1-212ENST00000546744 CDS2O95674 445 aa11.52□□□□□ -0.57
PTCH1-212ENST00000546744 HPP00738 406 aa11.52□□□□□ -0.57
PTCH1-212ENST00000546744 CLDN2P57739 230 aa11.52□□□□□ -0.57
PTCH1-212ENST00000546744 MRGPRX3Q96LB0 322 aa11.52□□□□□ -0.57
PTCH1-212ENST00000546744 NAA60Q9H7X0 242 aa11.52□□□□□ -0.57
PTCH1-212ENST00000546744 RNF24Q9Y225 148 aa11.52□□□□□ -0.57
PTCH1-212ENST00000546744 TMEM272A0A1B0GTI8 110 aa11.51□□□□□ -0.57
PTCH1-212ENST00000546744 TEX50A0A1B0GTY4 177 aa11.51□□□□□ -0.57
PTCH1-212ENST00000546744 MRPL33O75394 65 aaKnown RBP11.51□□□□□ -0.57
PTCH1-212ENST00000546744 CT45A10P0DMU9 189 aa11.51□□□□□ -0.57
PTCH1-212ENST00000546744 C1orf61Q13536 156 aa11.51□□□□□ -0.57
PTCH1-212ENST00000546744 SHHQ15465 462 aa11.51□□□□□ -0.57
PTCH1-212ENST00000546744 ZNF660Q6AZW8 331 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-212ENST00000546744 DHRS7BQ6IAN0 325 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-212ENST00000546744 REC114Q7Z4M0 266 aa11.51□□□□□ -0.57
PTCH1-212ENST00000546744 MRPS24Q96EL2 167 aaKnown RBP11.51□□□□□ -0.57
PTCH1-212ENST00000546744 CNRIP1Q96F85 164 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-212ENST00000546744 ACY3Q96HD9 319 aa11.51□□□□□ -0.57
PTCH1-212ENST00000546744 SLC35E1Q96K37 410 aa11.51□□□□□ -0.57
PTCH1-212ENST00000546744 LINC00597Q9H2U6 94 aa11.51□□□□□ -0.57
PTCH1-212ENST00000546744 VAX2Q9UIW0 290 aa11.51□□□□□ -0.57
PTCH1-212ENST00000546744 SLC22A13Q9Y226 551 aa11.51□□□□□ -0.57
PTCH1-212ENST00000546744 hCG_1809904A0A1W2PP81 198 aa11.51□□□□□ -0.57
PTCH1-212ENST00000546744 A0A1W2PR64 198 aa11.51□□□□□ -0.57
PTCH1-212ENST00000546744 A0A1W2PRV1 198 aa11.51□□□□□ -0.57
PTCH1-212ENST00000546744 RFLNAQ6ZTI6 216 aa11.51□□□□□ -0.57
PTCH1-212ENST00000546744 EXTL1Q92935 676 aa11.51□□□□□ -0.57
PTCH1-212ENST00000546744 MS4A7Q9GZW8 240 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-212ENST00000546744 PPIL1Q9Y3C6 166 aa11.51□□□□□ -0.57
PTCH1-212ENST00000546744 MPPED1O15442 326 aa11.51□□□□□ -0.57
PTCH1-212ENST00000546744 TUSC2O75896 110 aa11.51□□□□□ -0.57
PTCH1-212ENST00000546744 ICAM2P13598 275 aa11.51□□□□□ -0.57
PTCH1-212ENST00000546744 CDX1P47902 265 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-212ENST00000546744 OR51H1Q8NH63 302 aa11.51□□□□□ -0.57
PTCH1-212ENST00000546744 SPOCK3Q9BQ16 436 aa11.51□□□□□ -0.57
PTCH1-212ENST00000546744 TMEM191AQ9H0A3 160 aa11.51□□□□□ -0.57
PTCH1-212ENST00000546744 CLEC18AA5D8T8 446 aa11.51□□□□□ -0.57
PTCH1-212ENST00000546744 GPANK1O95872 356 aa11.51□□□□□ -0.57
PTCH1-212ENST00000546744 PI3P19957 117 aa11.51□□□□□ -0.57
PTCH1-212ENST00000546744 MRGPRGQ86SM5 289 aa11.51□□□□□ -0.57
PTCH1-212ENST00000546744 CISD2Q8N5K1 135 aaKnown RBP11.51□□□□□ -0.57
PTCH1-212ENST00000546744 CLEC18CQ8NCF0 446 aa11.51□□□□□ -0.57
PTCH1-212ENST00000546744 NT5CQ8TCD5 201 aa11.51□□□□□ -0.57
PTCH1-212ENST00000546744 FAM122AQ96E09 287 aa11.51□□□□□ -0.57
PTCH1-212ENST00000546744 MVB12AQ96EY5 273 aa11.51□□□□□ -0.57
PTCH1-212ENST00000546744 BOKQ9UMX3 212 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-212ENST00000546744 CCL27Q9Y4X3 112 aa11.51□□□□□ -0.57
PTCH1-212ENST00000546744 CRISP2P16562 243 aa11.5□□□□□ -0.57
PTCH1-212ENST00000546744 GZMMP51124 257 aa11.5□□□□□ -0.57
PTCH1-212ENST00000546744 RPS15P62841 145 aaKnown RBP11.5□□□□□ -0.57
PTCH1-212ENST00000546744 SHBQ15464 509 aa11.5□□□□□ -0.57
PTCH1-212ENST00000546744 OR8G1Q15617 311 aa11.5□□□□□ -0.57
PTCH1-212ENST00000546744 RTL8BQ17RB0 113 aa11.5□□□□□ -0.57
PTCH1-212ENST00000546744 ETFRF1Q6IPR1 90 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms