RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 ARL6IP5O75915 188 aa7.32□□□□□ -1.24
VPS29-203ENST00000546588 CLPXO76031 633 aa7.32□□□□□ -1.24
VPS29-203ENST00000546588 TOXO94900 526 aa7.32□□□□□ -1.24
VPS29-203ENST00000546588 TTRP02766 147 aa7.32□□□□□ -1.24
VPS29-203ENST00000546588 ACHEP22303 614 aa7.32□□□□□ -1.24
VPS29-203ENST00000546588 TGFBR1P36897 503 aa7.32□□□□□ -1.24
VPS29-203ENST00000546588 GUCA1AP43080 201 aaPredicted RBP7.32□□□□□ -1.24
VPS29-203ENST00000546588 MFGE8Q08431 387 aaPredicted RBP7.32□□□□□ -1.24
VPS29-203ENST00000546588 Q499Y3 187 aa7.32□□□□□ -1.24
VPS29-203ENST00000546588 SOWAHCQ53LP3 525 aaPredicted RBP7.32□□□□□ -1.24
VPS29-203ENST00000546588 ZMAT1Q5H9K5 638 aa7.32□□□□□ -1.24
VPS29-203ENST00000546588 ZNF529Q6P280 563 aa7.32□□□□□ -1.24
VPS29-203ENST00000546588 ARL9Q6T311 187 aa7.32□□□□□ -1.24
VPS29-203ENST00000546588 COLCA1Q6ZS62 124 aa7.32□□□□□ -1.24
VPS29-203ENST00000546588 LYPD6Q86Y78 171 aa7.32□□□□□ -1.24
VPS29-203ENST00000546588 ZGRF1Q86YA3 2104 aa7.32□□□□□ -1.24
VPS29-203ENST00000546588 CROCCP3Q8IVE0 287 aa7.32□□□□□ -1.24
VPS29-203ENST00000546588 LINC00346Q8IVM7 164 aa7.32□□□□□ -1.24
VPS29-203ENST00000546588 C17orf78Q8N4C9 275 aa7.32□□□□□ -1.24
VPS29-203ENST00000546588 YIPF7Q8N8F6 280 aa7.32□□□□□ -1.24
VPS29-203ENST00000546588 LINC00482Q8N8I6 264 aa7.32□□□□□ -1.24
VPS29-203ENST00000546588 ZFP41Q8N8Y5 198 aa7.32□□□□□ -1.24
VPS29-203ENST00000546588 OR1K1Q8NGR3 316 aa7.32□□□□□ -1.24
VPS29-203ENST00000546588 OR2AJ1Q8NGZ0 328 aa7.32□□□□□ -1.24
VPS29-203ENST00000546588 OR5AK2Q8NH90 309 aa7.32□□□□□ -1.24
VPS29-203ENST00000546588 SNRNP40Q96DI7 357 aaKnown RBP7.32□□□□□ -1.24
VPS29-203ENST00000546588 WDFY2Q96P53 400 aa7.32□□□□□ -1.24
VPS29-203ENST00000546588 DERL3Q96Q80 235 aa7.32□□□□□ -1.24
VPS29-203ENST00000546588 PDCD1LG2Q9BQ51 273 aa7.32□□□□□ -1.24
VPS29-203ENST00000546588 RBM24Q9BX46 236 aaKnown RBP7.32□□□□□ -1.24
VPS29-203ENST00000546588 PRRG4Q9BZD6 226 aa7.32□□□□□ -1.24
VPS29-203ENST00000546588 COMMD4Q9H0A8 199 aa7.32□□□□□ -1.24
VPS29-203ENST00000546588 MMP27Q9H306 513 aa7.32□□□□□ -1.24
VPS29-203ENST00000546588 RERGLQ9H628 205 aa7.32□□□□□ -1.24
VPS29-203ENST00000546588 SEC61A2Q9H9S3 476 aa7.32□□□□□ -1.24
VPS29-203ENST00000546588 B3GNT2Q9NY97 397 aa7.32□□□□□ -1.24
VPS29-203ENST00000546588 ZNF391Q9UJN7 358 aa7.32□□□□□ -1.24
VPS29-203ENST00000546588 IKZF2Q9UKS7 526 aa7.32□□□□□ -1.24
VPS29-203ENST00000546588 FBXL3Q9UKT7 428 aa7.32□□□□□ -1.24
VPS29-203ENST00000546588 CACNA1CQ13936 2221 aa7.32□□□□□ -1.24
VPS29-203ENST00000546588 ZZEF1O43149 2961 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 A0A0G2JK05 382 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 TMEM269A0A1B0GVZ9 245 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 NPIPB6E9PJ23 425 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 LRRTM2O43300 516 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 FARS2O95363 451 aaKnown RBP7.31□□□□□ -1.24
VPS29-203ENST00000546588 H2BFMP0C1H6 154 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 B4GALT1P15291 398 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 ZNF32P17041 273 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 IGFBP3P17936 291 aaPredicted RBP7.31□□□□□ -1.24
VPS29-203ENST00000546588 OPRM1P35372 400 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 RPS19P39019 145 aaKnown RBP7.31□□□□□ -1.24
VPS29-203ENST00000546588 PITPNBP48739 271 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 DYRK1AQ13627 763 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 DGUOKQ16854 277 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 ZNF404Q494X3 552 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 ACSM3Q53FZ2 586 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 TMEM244Q5VVB8 128 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 C22orf42Q6IC83 251 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 KRTAP5-3Q6L8H2 238 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 ANKRD16Q6P6B7 361 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 PCSK4Q6UW60 755 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 DRAM2Q6UX65 266 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 NR2C2APQ86WQ0 139 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 SKA3Q8IX90 412 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 LINC00518Q8N0U6 118 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 PARP16Q8N5Y8 322 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 ST6GALNAC3Q8NDV1 305 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 OR14K1Q8NGZ2 314 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 TBC1D15Q8TC07 691 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 GPR148Q8TDV2 347 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 ASB5Q8WWX0 329 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 BCL2L2Q92843 193 aaPredicted RBP7.31□□□□□ -1.24
VPS29-203ENST00000546588 SPSB4Q96A44 273 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 C10orf35Q96D05 121 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 SNX22Q96L94 193 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 FOXN4Q96NZ1 517 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 TRIB1Q96RU8 372 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 TMED9Q9BVK6 235 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 SFXN3Q9BWM7 321 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 TTTY10Q9BZA0 68 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 BARHL1Q9BZE3 327 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 CEP295Q9C0D2 2601 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 OR2H1Q9GZK4 316 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 PPIL3Q9H2H8 161 aaKnown RBP7.31□□□□□ -1.24
VPS29-203ENST00000546588 RNF167Q9H6Y7 350 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 MOV10Q9HCE1 1003 aaKnown RBP7.31□□□□□ -1.24
VPS29-203ENST00000546588 OBP2BQ9NPH6 170 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 DIABLOQ9NR28 239 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 JKAMPQ9P055 326 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 OR52A1Q9UKL2 312 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 TIMM10BQ9Y5J6 103 aa7.31□□□□□ -1.24
VPS29-203ENST00000546588 SPTBN2O15020 2390 aa7.3□□□□□ -1.24
VPS29-203ENST00000546588 FUOMA2VDF0 154 aa7.3□□□□□ -1.24
VPS29-203ENST00000546588 LOC110117498-PIK3R3F6TDL0 507 aa7.3□□□□□ -1.24
VPS29-203ENST00000546588 PIN1P1O15428 100 aa7.3□□□□□ -1.24
VPS29-203ENST00000546588 SGCEO43556 437 aa7.3□□□□□ -1.24
VPS29-203ENST00000546588 UBL3O95164 117 aa7.3□□□□□ -1.24
VPS29-203ENST00000546588 ACAA1P09110 424 aaPredicted RBP7.3□□□□□ -1.24
VPS29-203ENST00000546588 ACSM4P0C7M7 580 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms