RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 SLC35A2P78381 396 aa10.28□□□□□ -0.76
SCAF11-208ENST00000546534 MXRA7P84157 204 aa10.28□□□□□ -0.76
SCAF11-208ENST00000546534 FAM3AP98173 230 aa10.28□□□□□ -0.76
SCAF11-208ENST00000546534 CNN3Q15417 329 aaKnown RBP10.28□□□□□ -0.76
SCAF11-208ENST00000546534 FGD3Q5JSP0 725 aa10.28□□□□□ -0.76
SCAF11-208ENST00000546534 Q6ZS46 218 aa10.28□□□□□ -0.76
SCAF11-208ENST00000546534 FKBP9P1Q75LS8 142 aa10.28□□□□□ -0.76
SCAF11-208ENST00000546534 SLC16A9Q7RTY1 509 aa10.28□□□□□ -0.76
SCAF11-208ENST00000546534 TMEM219Q86XT9 240 aa10.28□□□□□ -0.76
SCAF11-208ENST00000546534 FAM185AQ8N0U4 392 aa10.28□□□□□ -0.76
SCAF11-208ENST00000546534 ANGPTL6Q8NI99 470 aa10.28□□□□□ -0.76
SCAF11-208ENST00000546534 RCC1LQ96I51 464 aaKnown RBP10.28□□□□□ -0.76
SCAF11-208ENST00000546534 COPS4Q9BT78 406 aa10.28□□□□□ -0.76
SCAF11-208ENST00000546534 PRSS22Q9GZN4 317 aa10.28□□□□□ -0.76
SCAF11-208ENST00000546534 HEXA-AS1Q9H8Q6 139 aa10.28□□□□□ -0.76
SCAF11-208ENST00000546534 KCNG2Q9UJ96 466 aa10.28□□□□□ -0.76
SCAF11-208ENST00000546534 TCF19Q9Y242 345 aa10.28□□□□□ -0.76
SCAF11-208ENST00000546534 TRBV23-1A0A0A0MS06 115 aa10.27□□□□□ -0.77
SCAF11-208ENST00000546534 TRBV4-1A0A0J9YWV2 114 aa10.27□□□□□ -0.77
SCAF11-208ENST00000546534 A0A1W2PRQ8 180 aa10.27□□□□□ -0.77
SCAF11-208ENST00000546534 A6NDX4 124 aa10.27□□□□□ -0.77
SCAF11-208ENST00000546534 E9PQ18 207 aa10.27□□□□□ -0.77
SCAF11-208ENST00000546534 PF4P02776 101 aa10.27□□□□□ -0.77
SCAF11-208ENST00000546534 H1F0P07305 194 aaKnown RBP10.27□□□□□ -0.77
SCAF11-208ENST00000546534 ZNF823P16415 610 aa10.27□□□□□ -0.77
SCAF11-208ENST00000546534 NOS3P29474 1203 aa10.27□□□□□ -0.77
SCAF11-208ENST00000546534 EGFEM1PQ0D2K5 195 aa10.27□□□□□ -0.77
SCAF11-208ENST00000546534 DGCR6Q14129 220 aa10.27□□□□□ -0.77
SCAF11-208ENST00000546534 SEC23BQ15437 767 aa10.27□□□□□ -0.77
SCAF11-208ENST00000546534 TMEM95Q3KNT9 176 aa10.27□□□□□ -0.77
SCAF11-208ENST00000546534 PLA1AQ53H76 456 aa10.27□□□□□ -0.77
SCAF11-208ENST00000546534 DCXRQ7Z4W1 244 aa10.27□□□□□ -0.77
SCAF11-208ENST00000546534 LHFPL4Q7Z7J7 247 aa10.27□□□□□ -0.77
SCAF11-208ENST00000546534 CYP4Z1Q86W10 505 aa10.27□□□□□ -0.77
SCAF11-208ENST00000546534 ZDHHC21Q8IVQ6 265 aa10.27□□□□□ -0.77
SCAF11-208ENST00000546534 DYNAPQ8N1N2 210 aa10.27□□□□□ -0.77
SCAF11-208ENST00000546534 CYB561A3Q8NBI2 242 aa10.27□□□□□ -0.77
SCAF11-208ENST00000546534 ZNRF1Q8ND25 227 aa10.27□□□□□ -0.77
SCAF11-208ENST00000546534 SDR9C7Q8NEX9 313 aa10.27□□□□□ -0.77
SCAF11-208ENST00000546534 OR5AU1Q8NGC0 362 aa10.27□□□□□ -0.77
SCAF11-208ENST00000546534 OR10Z1Q8NGY1 313 aa10.27□□□□□ -0.77
SCAF11-208ENST00000546534 RPL3LQ92901 407 aaKnown RBP10.27□□□□□ -0.77
SCAF11-208ENST00000546534 MUC13Q9H3R2 512 aa10.27□□□□□ -0.77
SCAF11-208ENST00000546534 RHBDD3Q9Y3P4 386 aa10.27□□□□□ -0.77
SCAF11-208ENST00000546534 ENPP4Q9Y6X5 453 aa10.27□□□□□ -0.77
SCAF11-208ENST00000546534 TVP23AA6NH52 213 aa10.26□□□□□ -0.77
SCAF11-208ENST00000546534 FAM90A8PA6NJQ4 464 aa10.26□□□□□ -0.77
SCAF11-208ENST00000546534 VGLL3A8MV65 326 aa10.26□□□□□ -0.77
SCAF11-208ENST00000546534 TBX1O43435 398 aa10.26□□□□□ -0.77
SCAF11-208ENST00000546534 AKR7A2O43488 359 aa10.26□□□□□ -0.77
SCAF11-208ENST00000546534 COX7A1P24310 79 aa10.26□□□□□ -0.77
SCAF11-208ENST00000546534 SLC6A6P31641 620 aa10.26□□□□□ -0.77
SCAF11-208ENST00000546534 PYCR1P32322 319 aa10.26□□□□□ -0.77
SCAF11-208ENST00000546534 GNALP38405 381 aa10.26□□□□□ -0.77
SCAF11-208ENST00000546534 SLC7A2P52569 658 aa10.26□□□□□ -0.77
SCAF11-208ENST00000546534 LGALS4P56470 323 aa10.26□□□□□ -0.77
SCAF11-208ENST00000546534 BLCAPP62952 87 aa10.26□□□□□ -0.77
SCAF11-208ENST00000546534 TAF13Q15543 124 aa10.26□□□□□ -0.77
SCAF11-208ENST00000546534 COQ5Q5HYK3 327 aa10.26□□□□□ -0.77
SCAF11-208ENST00000546534 TCTEX1D4Q5JR98 221 aa10.26□□□□□ -0.77
SCAF11-208ENST00000546534 AGBL2Q5U5Z8 902 aa10.26□□□□□ -0.77
SCAF11-208ENST00000546534 CCDC121Q6ZUS5 278 aa10.26□□□□□ -0.77
SCAF11-208ENST00000546534 CBLL1Q75N03 491 aa10.26□□□□□ -0.77
SCAF11-208ENST00000546534 C11orf42Q8N5U0 333 aa10.26□□□□□ -0.77
SCAF11-208ENST00000546534 TMEM185AQ8NFB2 350 aa10.26□□□□□ -0.77
SCAF11-208ENST00000546534 OR4C15Q8NGM1 316 aa10.26□□□□□ -0.77
SCAF11-208ENST00000546534 FANK1Q8TC84 345 aa10.26□□□□□ -0.77
SCAF11-208ENST00000546534 ZNRF4Q8WWF5 429 aa10.26□□□□□ -0.77
SCAF11-208ENST00000546534 SGK3Q96BR1 496 aa10.26□□□□□ -0.77
SCAF11-208ENST00000546534 KCNJ15Q99712 375 aa10.26□□□□□ -0.77
SCAF11-208ENST00000546534 PAPOLGQ9BWT3 736 aaKnown RBP10.26□□□□□ -0.77
SCAF11-208ENST00000546534 OR52D1Q9H346 318 aa10.26□□□□□ -0.77
SCAF11-208ENST00000546534 INPP5EQ9NRR6 644 aa10.26□□□□□ -0.77
SCAF11-208ENST00000546534 C19orf12Q9NSK7 152 aa10.26□□□□□ -0.77
SCAF11-208ENST00000546534 CENPMQ9NSP4 180 aa10.26□□□□□ -0.77
SCAF11-208ENST00000546534 IGKV1D-17A0A075B6S4 117 aa10.25□□□□□ -0.77
SCAF11-208ENST00000546534 hCG_38984A0A1B0GV85 526 aa10.25□□□□□ -0.77
SCAF11-208ENST00000546534 OR2AT4A6NND4 320 aa10.25□□□□□ -0.77
SCAF11-208ENST00000546534 CXCR6O00574 342 aa10.25□□□□□ -0.77
SCAF11-208ENST00000546534 SYNGR1O43759 233 aa10.25□□□□□ -0.77
SCAF11-208ENST00000546534 GLCEO94923 617 aa10.25□□□□□ -0.77
SCAF11-208ENST00000546534 DUS4LO95620 317 aaKnown RBP10.25□□□□□ -0.77
SCAF11-208ENST00000546534 VDAC2P45880 294 aaPredicted RBP10.25□□□□□ -0.77
SCAF11-208ENST00000546534 GABRA2P47869 451 aa10.25□□□□□ -0.77
SCAF11-208ENST00000546534 GSK3AP49840 483 aa10.25□□□□□ -0.77
SCAF11-208ENST00000546534 ERVFRD-1P60508 538 aa10.25□□□□□ -0.77
SCAF11-208ENST00000546534 SPIBQ01892 262 aa10.25□□□□□ -0.77
SCAF11-208ENST00000546534 KLHL12Q53G59 568 aa10.25□□□□□ -0.77
SCAF11-208ENST00000546534 METTL21CQ5VZV1 264 aa10.25□□□□□ -0.77
SCAF11-208ENST00000546534 C8orf86Q6ZUL3 223 aa10.25□□□□□ -0.77
SCAF11-208ENST00000546534 OR5K1Q8NHB7 308 aa10.25□□□□□ -0.77
SCAF11-208ENST00000546534 RPS4Y2Q8TD47 263 aa10.25□□□□□ -0.77
SCAF11-208ENST00000546534 SLAMF6Q96DU3 332 aa10.25□□□□□ -0.77
SCAF11-208ENST00000546534 REEP6Q96HR9 211 aa10.25□□□□□ -0.77
SCAF11-208ENST00000546534 MICU1Q9BPX6 476 aa10.25□□□□□ -0.77
SCAF11-208ENST00000546534 IFT27Q9BW83 186 aa10.25□□□□□ -0.77
SCAF11-208ENST00000546534 RTL8AQ9BWD3 113 aa10.25□□□□□ -0.77
SCAF11-208ENST00000546534 GID8Q9NWU2 228 aa10.25□□□□□ -0.77
SCAF11-208ENST00000546534 CMTM6Q9NX76 183 aa10.25□□□□□ -0.77
SCAF11-208ENST00000546534 NLKQ9UBE8 527 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms