RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 SSNA1O43805 119 aa10.38□□□□□ -0.75
CCDC38-202ENST00000546386 DHRS3O75911 302 aa10.38□□□□□ -0.75
CCDC38-202ENST00000546386 FARS2O95363 451 aaKnown RBP10.38□□□□□ -0.75
CCDC38-202ENST00000546386 TPOP07202 933 aa10.38□□□□□ -0.75
CCDC38-202ENST00000546386 CRYGSP22914 178 aa10.38□□□□□ -0.75
CCDC38-202ENST00000546386 AGTR1P30556 359 aa10.38□□□□□ -0.75
CCDC38-202ENST00000546386 TAF9Q16594 264 aa10.38□□□□□ -0.75
CCDC38-202ENST00000546386 DOK3Q7L591 496 aa10.38□□□□□ -0.75
CCDC38-202ENST00000546386 C6orf201Q7Z4U5 140 aa10.38□□□□□ -0.75
CCDC38-202ENST00000546386 FJX1Q86VR8 437 aa10.38□□□□□ -0.75
CCDC38-202ENST00000546386 DUSP18Q8NEJ0 188 aa10.38□□□□□ -0.75
CCDC38-202ENST00000546386 OR11H7Q8NGC8 314 aa10.38□□□□□ -0.75
CCDC38-202ENST00000546386 GRPEL2Q8TAA5 225 aa10.38□□□□□ -0.75
CCDC38-202ENST00000546386 RAB40AQ8WXH6 277 aa10.38□□□□□ -0.75
CCDC38-202ENST00000546386 PTTG3PQ9NZH4 202 aa10.38□□□□□ -0.75
CCDC38-202ENST00000546386 KCNK7Q9Y2U2 307 aa10.38□□□□□ -0.75
CCDC38-202ENST00000546386 STARD10Q9Y365 291 aa10.38□□□□□ -0.75
CCDC38-202ENST00000546386 CFAP46Q8IYW2 2715 aa10.38□□□□□ -0.75
CCDC38-202ENST00000546386 LRP3O75074 770 aa10.38□□□□□ -0.75
CCDC38-202ENST00000546386 TSC22D2O75157 780 aa10.38□□□□□ -0.75
CCDC38-202ENST00000546386 PMP2P02689 132 aa10.38□□□□□ -0.75
CCDC38-202ENST00000546386 MMP7P09237 267 aaPredicted RBP10.38□□□□□ -0.75
CCDC38-202ENST00000546386 STOMP27105 288 aa10.38□□□□□ -0.75
CCDC38-202ENST00000546386 IDH3GP51553 393 aaPredicted RBP10.38□□□□□ -0.75
CCDC38-202ENST00000546386 SNTB1Q13884 538 aaKnown RBP10.38□□□□□ -0.75
CCDC38-202ENST00000546386 C9orf106Q8NAJ2 232 aa10.38□□□□□ -0.75
CCDC38-202ENST00000546386 OR51T1Q8NGJ9 327 aa10.38□□□□□ -0.75
CCDC38-202ENST00000546386 SCMH1Q96GD3 660 aa10.38□□□□□ -0.75
CCDC38-202ENST00000546386 ZNF488Q96MN9 340 aa10.38□□□□□ -0.75
CCDC38-202ENST00000546386 PRR13Q9NZ81 148 aa10.38□□□□□ -0.75
CCDC38-202ENST00000546386 IL36RNQ9UBH0 155 aa10.38□□□□□ -0.75
CCDC38-202ENST00000546386 SDCBPO00560 298 aaPredicted RBP10.37□□□□□ -0.75
CCDC38-202ENST00000546386 AKR7A2O43488 359 aa10.37□□□□□ -0.75
CCDC38-202ENST00000546386 H2AFB2P0C5Z0 115 aa10.37□□□□□ -0.75
CCDC38-202ENST00000546386 PTGER4P35408 488 aa10.37□□□□□ -0.75
CCDC38-202ENST00000546386 PER3P56645 1201 aa10.37□□□□□ -0.75
CCDC38-202ENST00000546386 MRPS15P82914 257 aaKnown RBP10.37□□□□□ -0.75
CCDC38-202ENST00000546386 BAMBIQ13145 260 aa10.37□□□□□ -0.75
CCDC38-202ENST00000546386 SF3B4Q15427 424 aaKnown RBP eCLIP10.37□□□□□ -0.75
CCDC38-202ENST00000546386 PIGYQ3MUY2 71 aa10.37□□□□□ -0.75
CCDC38-202ENST00000546386 PLEKHN1Q494U1 663 aaPredicted RBP10.37□□□□□ -0.75
CCDC38-202ENST00000546386 LIN54Q6MZP7 749 aa10.37□□□□□ -0.75
CCDC38-202ENST00000546386 MOB3CQ70IA8 216 aa10.37□□□□□ -0.75
CCDC38-202ENST00000546386 TRAPPC6BQ86SZ2 158 aa10.37□□□□□ -0.75
CCDC38-202ENST00000546386 LYPD6Q86Y78 171 aa10.37□□□□□ -0.75
CCDC38-202ENST00000546386 CALHM1Q8IU99 346 aa10.37□□□□□ -0.75
CCDC38-202ENST00000546386 SEMA6DQ8NFY4 1073 aa10.37□□□□□ -0.75
CCDC38-202ENST00000546386 SNIP1Q8TAD8 396 aaKnown RBP10.37□□□□□ -0.75
CCDC38-202ENST00000546386 ABHD17AQ96GS6 310 aa10.37□□□□□ -0.75
CCDC38-202ENST00000546386 GINS4Q9BRT9 223 aa10.37□□□□□ -0.75
CCDC38-202ENST00000546386 PAPOLGQ9BWT3 736 aaKnown RBP10.37□□□□□ -0.75
CCDC38-202ENST00000546386 OR10A2Q9H208 303 aa10.37□□□□□ -0.75
CCDC38-202ENST00000546386 ZNF69Q9UC07 566 aa10.37□□□□□ -0.75
CCDC38-202ENST00000546386 PKD1L2Q7Z442 2459 aa10.37□□□□□ -0.75
CCDC38-202ENST00000546386 F8VVB4 439 aa10.37□□□□□ -0.75
CCDC38-202ENST00000546386 F8VWA3 439 aa10.37□□□□□ -0.75
CCDC38-202ENST00000546386 HTR3BO95264 441 aa10.37□□□□□ -0.75
CCDC38-202ENST00000546386 PTGFRP43088 359 aa10.37□□□□□ -0.75
CCDC38-202ENST00000546386 NPBWR2P48146 333 aa10.37□□□□□ -0.75
CCDC38-202ENST00000546386 GSK3AP49840 483 aa10.37□□□□□ -0.75
CCDC38-202ENST00000546386 TMEM50BP56557 158 aa10.37□□□□□ -0.75
CCDC38-202ENST00000546386 GK2Q14410 553 aaPredicted RBP10.37□□□□□ -0.75
CCDC38-202ENST00000546386 RAB35Q15286 201 aa10.37□□□□□ -0.75
CCDC38-202ENST00000546386 TUSC1Q2TAM9 212 aa10.37□□□□□ -0.75
CCDC38-202ENST00000546386 ZFP69Q49AA0 526 aa10.37□□□□□ -0.75
CCDC38-202ENST00000546386 OR56B2PQ8NGI1 322 aa10.37□□□□□ -0.75
CCDC38-202ENST00000546386 OPN3Q9H1Y3 402 aaPredicted RBP10.37□□□□□ -0.75
CCDC38-202ENST00000546386 METTL17Q9H7H0 456 aaPredicted RBP10.37□□□□□ -0.75
CCDC38-202ENST00000546386 ZDHHC11Q9H8X9 412 aa10.37□□□□□ -0.75
CCDC38-202ENST00000546386 CELSR1Q9NYQ6 3014 aa10.37□□□□□ -0.75
CCDC38-202ENST00000546386 ANKRD20A5PA0PJZ0 165 aa10.36□□□□□ -0.75
CCDC38-202ENST00000546386 HSPB2A8KAH6 182 aa10.36□□□□□ -0.75
CCDC38-202ENST00000546386 AMY2AP04746 511 aa10.36□□□□□ -0.75
CCDC38-202ENST00000546386 CST2P09228 141 aa10.36□□□□□ -0.75
CCDC38-202ENST00000546386 FSTP19883 344 aa10.36□□□□□ -0.75
CCDC38-202ENST00000546386 GPM6AP51674 278 aa10.36□□□□□ -0.75
CCDC38-202ENST00000546386 FAM3AP98173 230 aa10.36□□□□□ -0.75
CCDC38-202ENST00000546386 SCRN3Q0VDG4 424 aa10.36□□□□□ -0.75
CCDC38-202ENST00000546386 HSPB2Q16082 182 aa10.36□□□□□ -0.75
CCDC38-202ENST00000546386 ALKBH6Q3KRA9 238 aa10.36□□□□□ -0.75
CCDC38-202ENST00000546386 PRR30Q53SZ7 412 aaPredicted RBP10.36□□□□□ -0.75
CCDC38-202ENST00000546386 MDP1Q86V88 176 aa10.36□□□□□ -0.75
CCDC38-202ENST00000546386 C1orf147Q96MC9 270 aaPredicted RBP10.36□□□□□ -0.75
CCDC38-202ENST00000546386 LPAR5Q9H1C0 372 aa10.36□□□□□ -0.75
CCDC38-202ENST00000546386 EMC3Q9P0I2 261 aa10.36□□□□□ -0.75
CCDC38-202ENST00000546386 ETV7Q9Y603 341 aa10.36□□□□□ -0.75
CCDC38-202ENST00000546386 FLNCQ14315 2725 aa10.36□□□□□ -0.75
CCDC38-202ENST00000546386 OR6C6A6NF89 314 aa10.36□□□□□ -0.75
CCDC38-202ENST00000546386 GFRA3O60609 400 aa10.36□□□□□ -0.75
CCDC38-202ENST00000546386 CDC14BO60729 498 aa10.36□□□□□ -0.75
CCDC38-202ENST00000546386 SFTPBP07988 381 aa10.36□□□□□ -0.75
CCDC38-202ENST00000546386 FAM87AP0C7U9 286 aa10.36□□□□□ -0.75
CCDC38-202ENST00000546386 NR2C1P13056 603 aa10.36□□□□□ -0.75
CCDC38-202ENST00000546386 OTX1P32242 354 aaPredicted RBP10.36□□□□□ -0.75
CCDC38-202ENST00000546386 HRH1P35367 487 aa10.36□□□□□ -0.75
CCDC38-202ENST00000546386 GSG1Q2KHT4 349 aa10.36□□□□□ -0.75
CCDC38-202ENST00000546386 C2orf68Q2NKX9 166 aa10.36□□□□□ -0.75
CCDC38-202ENST00000546386 PLCXD3Q63HM9 321 aa10.36□□□□□ -0.75
CCDC38-202ENST00000546386 S100A13Q99584 98 aa10.36□□□□□ -0.75
CCDC38-202ENST00000546386 TMEM59Q9BXS4 323 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms