RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 POMPQ9Y244 141 aa7.76□□□□□ -1.17
YBX3-218ENST00000546298 KPTNQ9Y664 436 aa7.76□□□□□ -1.17
YBX3-218ENST00000546298 IGHV3OR15-7A0A075B7D8 119 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 A0A0U1RQV5 110 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 ZNF816-ZNF321PA0A0X1KG74 233 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 TMEM269A0A1B0GVZ9 245 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 NKX6-3A6NJ46 265 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 ZNF850A8MQ14 1090 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 SRRM5B3KS81 715 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 GSC2O15499 205 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 HOXA3O43365 443 aaPredicted RBP7.75□□□□□ -1.17
YBX3-218ENST00000546298 MMP9P14780 707 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 ATP6V1B1P15313 513 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 DCTDP32321 178 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 RASSF2P50749 326 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 ACTR3P61158 418 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 ARF6P62330 175 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 ESRRGP62508 458 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 CSNK2BP67870 215 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 HOXA4Q00056 320 aaPredicted RBP7.75□□□□□ -1.17
YBX3-218ENST00000546298 POU4F2Q12837 409 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 APOFQ13790 326 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 ZNF829Q3KNS6 432 aaPredicted RBP7.75□□□□□ -1.17
YBX3-218ENST00000546298 CDONQ4KMG0 1287 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 LRRC10Q5BKY1 277 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 ATPAF1Q5TC12 328 aaPredicted RBP7.75□□□□□ -1.17
YBX3-218ENST00000546298 Q6YL49 198 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 KCTD8Q6ZWB6 473 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 THAP5Q7Z6K1 395 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 WDR86Q86TI4 376 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 ZDHHC23Q8IYP9 409 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 HS3ST5Q8IZT8 346 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 SCCPDHQ8NBX0 429 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 BBS1Q8NFJ9 593 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 OR8B12Q8NGG6 310 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 OR5K1Q8NHB7 308 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 ZNF671Q8TAW3 534 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 SSMEM1Q8WWF3 244 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 OR5P3Q8WZ94 311 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 TMIGD2Q96BF3 282 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 SLC7A6OSQ96CW6 309 aaPredicted RBP7.75□□□□□ -1.17
YBX3-218ENST00000546298 MNTQ99583 582 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 TEAD3Q99594 435 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 PKP2Q99959 881 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 SIRPDQ9H106 197 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 UNKLQ9H9P5 680 aaKnown RBP7.75□□□□□ -1.17
YBX3-218ENST00000546298 SMURF1Q9HCE7 757 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 HAO2Q9NYQ3 351 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 ENOPH1Q9UHY7 261 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 CAB39Q9Y376 341 aaPredicted RBP7.75□□□□□ -1.17
YBX3-218ENST00000546298 LRP12Q9Y561 859 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 POMT1Q9Y6A1 747 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 ARHGAP32A7KAX9 2087 aa7.75□□□□□ -1.17
YBX3-218ENST00000546298 TANC2Q9HCD6 1990 aa7.74□□□□□ -1.17
YBX3-218ENST00000546298 IGHV1-69DA0A0B4J2H0 117 aa7.74□□□□□ -1.17
YBX3-218ENST00000546298 CENPVL3A0A0U1RRI6 287 aa7.74□□□□□ -1.17
YBX3-218ENST00000546298 A0A1B0GVI7 797 aa7.74□□□□□ -1.17
YBX3-218ENST00000546298 MTRF1O75570 445 aaKnown RBP7.74□□□□□ -1.17
YBX3-218ENST00000546298 IGHV1-69P01742 117 aa7.74□□□□□ -1.17
YBX3-218ENST00000546298 SFTPBP07988 381 aa7.74□□□□□ -1.17
YBX3-218ENST00000546298 SLC2A5P22732 501 aa7.74□□□□□ -1.17
YBX3-218ENST00000546298 EEF1B2P24534 225 aaKnown RBP7.74□□□□□ -1.17
YBX3-218ENST00000546298 TGM4P49221 684 aa7.74□□□□□ -1.17
YBX3-218ENST00000546298 RPL15P61313 204 aaKnown RBP7.74□□□□□ -1.17
YBX3-218ENST00000546298 ROM1Q03395 351 aa7.74□□□□□ -1.17
YBX3-218ENST00000546298 FAM76BQ5HYJ3 339 aa7.74□□□□□ -1.17
YBX3-218ENST00000546298 WDR38Q5JTN6 314 aa7.74□□□□□ -1.17
YBX3-218ENST00000546298 TMEM236Q5W0B7 351 aa7.74□□□□□ -1.17
YBX3-218ENST00000546298 FAHD1Q6P587 224 aa7.74□□□□□ -1.17
YBX3-218ENST00000546298 KRT74Q7RTS7 529 aa7.74□□□□□ -1.17
YBX3-218ENST00000546298 COMMD2Q86X83 199 aa7.74□□□□□ -1.17
YBX3-218ENST00000546298 ZNF679Q8IYX0 411 aa7.74□□□□□ -1.17
YBX3-218ENST00000546298 OR4F5Q8NH21 305 aa7.74□□□□□ -1.17
YBX3-218ENST00000546298 LHX4Q969G2 390 aa7.74□□□□□ -1.17
YBX3-218ENST00000546298 RAB3IPQ96QF0 476 aaPredicted RBP7.74□□□□□ -1.17
YBX3-218ENST00000546298 CNN2Q99439 309 aaKnown RBP7.74□□□□□ -1.17
YBX3-218ENST00000546298 SLITRK2Q9H156 845 aa7.74□□□□□ -1.17
YBX3-218ENST00000546298 ZNF696Q9H7X3 374 aa7.74□□□□□ -1.17
YBX3-218ENST00000546298 BEX1Q9HBH7 125 aa7.74□□□□□ -1.17
YBX3-218ENST00000546298 ACOXLQ9NUZ1 547 aa7.74□□□□□ -1.17
YBX3-218ENST00000546298 IKZF2Q9UKS7 526 aa7.74□□□□□ -1.17
YBX3-218ENST00000546298 KLHDC2Q9Y2U9 406 aa7.74□□□□□ -1.17
YBX3-218ENST00000546298 FAM96BQ9Y3D0 163 aa7.74□□□□□ -1.17
YBX3-218ENST00000546298 MMP24Q9Y5R2 645 aa7.74□□□□□ -1.17
YBX3-218ENST00000546298 SOX21Q9Y651 276 aaPredicted RBP7.74□□□□□ -1.17
YBX3-218ENST00000546298 MDFIC2A0A1B0GVS7 189 aa7.73□□□□□ -1.17
YBX3-218ENST00000546298 FAM181BA6NEQ2 426 aa7.73□□□□□ -1.17
YBX3-218ENST00000546298 OR5B21A6NL26 309 aa7.73□□□□□ -1.17
YBX3-218ENST00000546298 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.73□□□□□ -1.17
YBX3-218ENST00000546298 AKR7A2O43488 359 aa7.73□□□□□ -1.17
YBX3-218ENST00000546298 ATP5HO75947 161 aa7.73□□□□□ -1.17
YBX3-218ENST00000546298 MELTFP08582 738 aa7.73□□□□□ -1.17
YBX3-218ENST00000546298 GLRA1P23415 457 aa7.73□□□□□ -1.17
YBX3-218ENST00000546298 ACKR3P25106 362 aa7.73□□□□□ -1.17
YBX3-218ENST00000546298 RIDAP52758 137 aaKnown RBP7.73□□□□□ -1.17
YBX3-218ENST00000546298 GNG3P63215 75 aa7.73□□□□□ -1.17
YBX3-218ENST00000546298 GUCA2AQ02747 115 aa7.73□□□□□ -1.17
YBX3-218ENST00000546298 RIPPLY1Q0D2K3 151 aa7.73□□□□□ -1.17
YBX3-218ENST00000546298 IKZF1Q13422 519 aa7.73□□□□□ -1.17
YBX3-218ENST00000546298 PTGES3Q15185 160 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms