RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 UBE2NP61088 152 aaKnown RBP5.16□□□□□ -1.58
VPS50-220ENST00000544910 LGALSLQ3ZCW2 172 aaPredicted RBP5.16□□□□□ -1.58
VPS50-220ENST00000544910 FAM209AQ5JX71 171 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 OR52W1Q6IF63 320 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 FBXW12Q6X9E4 464 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 RPS19BP1Q86WX3 136 aaKnown RBP5.16□□□□□ -1.58
VPS50-220ENST00000544910 BAP18Q8IXM2 172 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 ZNF439Q8NDP4 499 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 OR9K2Q8NGE7 335 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 OR5L1Q8NGL2 311 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 OR6K3Q8NGY3 331 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 MARCH1Q8TCQ1 289 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 SGK3Q96BR1 496 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 WDR89Q96FK6 387 aaPredicted RBP5.16□□□□□ -1.58
VPS50-220ENST00000544910 UTP23Q9BRU9 249 aaKnown RBP5.16□□□□□ -1.58
VPS50-220ENST00000544910 GHITMQ9H3K2 345 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 SPACA1Q9HBV2 294 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 LYRM2Q9NU23 88 aaPredicted RBP5.16□□□□□ -1.58
VPS50-220ENST00000544910 MTCH2Q9Y6C9 303 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 CBY3A6NI87 242 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 SCGB2A1O75556 95 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 IGHMP01871 453 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 TMIGD3P0DMS9 266 aaPredicted RBP5.16□□□□□ -1.58
VPS50-220ENST00000544910 ZP4Q12836 540 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 HLA-BQ31612 363 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 OGFOD3Q6PK18 319 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 YRDCQ86U90 279 aaKnown RBP5.16□□□□□ -1.58
VPS50-220ENST00000544910 C15orf54Q8N8G6 183 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 CPNE4Q96A23 557 aaPredicted RBP5.16□□□□□ -1.58
VPS50-220ENST00000544910 VOPP1Q96AW1 172 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 ZNF2Q9BSG1 426 aaPredicted RBP5.16□□□□□ -1.58
VPS50-220ENST00000544910 FN3KRPQ9HA64 309 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 CDH20Q9HBT6 801 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 ZNF107Q9UII5 783 aaPredicted RBP5.16□□□□□ -1.58
VPS50-220ENST00000544910 GAB2Q9UQC2 676 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 TRPM6Q9BX84 2022 aa5.15□□□□□ -1.58
VPS50-220ENST00000544910 TRBV5-7A0A0A0MS05 114 aa5.15□□□□□ -1.58
VPS50-220ENST00000544910 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.15□□□□□ -1.58
VPS50-220ENST00000544910 UPK3AO75631 287 aa5.15□□□□□ -1.58
VPS50-220ENST00000544910 HPXP02790 462 aa5.15□□□□□ -1.58
VPS50-220ENST00000544910 FPR2P25090 351 aa5.15□□□□□ -1.58
VPS50-220ENST00000544910 PSMB6P28072 239 aa5.15□□□□□ -1.58
VPS50-220ENST00000544910 OR3A4PP47883 348 aa5.15□□□□□ -1.58
VPS50-220ENST00000544910 CYB561P49447 251 aa5.15□□□□□ -1.58
VPS50-220ENST00000544910 PSMB3P49720 205 aa5.15□□□□□ -1.58
VPS50-220ENST00000544910 SHBQ15464 509 aa5.15□□□□□ -1.58
VPS50-220ENST00000544910 MSMO1Q15800 293 aa5.15□□□□□ -1.58
VPS50-220ENST00000544910 TRIM61Q5EBN2 209 aa5.15□□□□□ -1.58
VPS50-220ENST00000544910 ZNF813Q6ZN06 617 aa5.15□□□□□ -1.58
VPS50-220ENST00000544910 C16orf47Q6ZP98 133 aaPredicted RBP5.15□□□□□ -1.58
VPS50-220ENST00000544910 IL22RA1Q8N6P7 574 aa5.15□□□□□ -1.58
VPS50-220ENST00000544910 CLEC1AQ8NC01 280 aa5.15□□□□□ -1.58
VPS50-220ENST00000544910 OR52N4Q8NGI2 321 aa5.15□□□□□ -1.58
VPS50-220ENST00000544910 OR4D6Q8NGJ1 314 aa5.15□□□□□ -1.58
VPS50-220ENST00000544910 OR10AC1Q8NH08 325 aa5.15□□□□□ -1.58
VPS50-220ENST00000544910 HPSE2Q8WWQ2 592 aa5.15□□□□□ -1.58
VPS50-220ENST00000544910 ASB5Q8WWX0 329 aa5.15□□□□□ -1.58
VPS50-220ENST00000544910 PHYHIPLQ96FC7 376 aa5.15□□□□□ -1.58
VPS50-220ENST00000544910 BCO1Q9HAY6 547 aa5.15□□□□□ -1.58
VPS50-220ENST00000544910 MYOTQ9UBF9 498 aa5.15□□□□□ -1.58
VPS50-220ENST00000544910 C9orf170A2RU37 121 aa5.15□□□□□ -1.58
VPS50-220ENST00000544910 RPA2P15927 270 aa5.15□□□□□ -1.58
VPS50-220ENST00000544910 EPHA8P29322 1005 aaPredicted RBP5.15□□□□□ -1.58
VPS50-220ENST00000544910 GSK3AP49840 483 aa5.15□□□□□ -1.58
VPS50-220ENST00000544910 RBP2P50120 134 aa5.15□□□□□ -1.58
VPS50-220ENST00000544910 EFNB2P52799 333 aa5.15□□□□□ -1.58
VPS50-220ENST00000544910 IQCJQ1A5X6 159 aa5.15□□□□□ -1.58
VPS50-220ENST00000544910 IAH1Q2TAA2 248 aaPredicted RBP5.15□□□□□ -1.58
VPS50-220ENST00000544910 C9orf135Q5VTT2 229 aa5.15□□□□□ -1.58
VPS50-220ENST00000544910 TMPPEQ6ZT21 453 aa5.15□□□□□ -1.58
VPS50-220ENST00000544910 UBALD2Q8IYN6 164 aa5.15□□□□□ -1.58
VPS50-220ENST00000544910 SLC38A9Q8NBW4 561 aa5.15□□□□□ -1.58
VPS50-220ENST00000544910 CMBLQ96DG6 245 aa5.15□□□□□ -1.58
VPS50-220ENST00000544910 SERTAD4Q9NUC0 356 aa5.15□□□□□ -1.58
VPS50-220ENST00000544910 SLC39A9Q9NUM3 307 aa5.15□□□□□ -1.58
VPS50-220ENST00000544910 ELF5Q9UKW6 265 aaPredicted RBP5.15□□□□□ -1.58
VPS50-220ENST00000544910 A0A0G2JK05 382 aa5.15□□□□□ -1.59
VPS50-220ENST00000544910 M0QZK8 103 aa5.15□□□□□ -1.59
VPS50-220ENST00000544910 LGALS8O00214 317 aa5.15□□□□□ -1.59
VPS50-220ENST00000544910 GGCTO75223 188 aaKnown RBP5.15□□□□□ -1.59
VPS50-220ENST00000544910 DXOO77932 396 aaKnown RBP5.15□□□□□ -1.59
VPS50-220ENST00000544910 METTL15P1P0C7V9 234 aa5.15□□□□□ -1.59
VPS50-220ENST00000544910 RRASP10301 218 aa5.15□□□□□ -1.59
VPS50-220ENST00000544910 HIST1H1DP16402 221 aaKnown RBP5.15□□□□□ -1.59
VPS50-220ENST00000544910 FSTP19883 344 aa5.15□□□□□ -1.59
VPS50-220ENST00000544910 CD80P33681 288 aa5.15□□□□□ -1.59
VPS50-220ENST00000544910 RBM39Q14498 530 aaKnown RBP5.15□□□□□ -1.59
VPS50-220ENST00000544910 FAM162BQ5T6X4 162 aa5.15□□□□□ -1.59
VPS50-220ENST00000544910 BRICD5Q6PL45 260 aa5.15□□□□□ -1.59
VPS50-220ENST00000544910 PPP1R1CQ8WVI7 109 aa5.15□□□□□ -1.59
VPS50-220ENST00000544910 LIPHQ8WWY8 451 aa5.15□□□□□ -1.59
VPS50-220ENST00000544910 SLC39A7Q92504 469 aa5.15□□□□□ -1.59
VPS50-220ENST00000544910 SLC25A38Q96DW6 304 aa5.15□□□□□ -1.59
VPS50-220ENST00000544910 GNPNAT1Q96EK6 184 aaPredicted RBP5.15□□□□□ -1.59
VPS50-220ENST00000544910 MFRPQ9BY79 579 aa5.15□□□□□ -1.59
VPS50-220ENST00000544910 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.15□□□□□ -1.59
VPS50-220ENST00000544910 CA10Q9NS85 328 aa5.15□□□□□ -1.59
VPS50-220ENST00000544910 PADI1Q9ULC6 663 aa5.15□□□□□ -1.59
VPS50-220ENST00000544910 CNOT4O95628 575 aaKnown RBP5.15□□□□□ -1.59
VPS50-220ENST00000544910 OR13C7P0DN81 318 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms