RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 OR6C6A6NF89 314 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 NKX6-3A6NJ46 265 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 RFXANKO14593 260 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 PRYO14603 147 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 SGCEO43556 437 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 CHP2O43745 196 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 GMDSO60547 372 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 PTBP3O95758 552 aaKnown RBP3.25□□□□□ -1.89
SNHG1-220ENST00000544550 CH25HO95992 272 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 HLA-DPB1P04440 258 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 CHRNGP07510 517 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 ABHD2P08910 425 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 ASAH2BP0C7U1 165 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 BGNP21810 368 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 MYF6P23409 242 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 GGT2P36268 569 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 PCP4P48539 62 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 UGT2B15P54855 530 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 CDH12P55289 794 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 RGS8P57771 180 aaPredicted RBP3.25□□□□□ -1.89
SNHG1-220ENST00000544550 BLCAPP62952 87 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 PRB3Q04118 309 aaPredicted RBP3.25□□□□□ -1.89
SNHG1-220ENST00000544550 FADDQ13158 208 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 AQP6Q13520 282 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 SELPLGQ14242 412 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 ENDOGQ14249 297 aaKnown RBP3.25□□□□□ -1.89
SNHG1-220ENST00000544550 OR8G1Q15617 311 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 MPPED2Q15777 294 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 SPANXN4Q5MJ08 99 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 HHATQ5VTY9 493 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 TMEM88Q6PEY1 159 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 ZNF613Q6PF04 617 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 DHRS4L2Q6PKH6 230 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 SLC25A47Q6Q0C1 308 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 FOXL2NBQ6ZUU3 175 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 C16orf82Q7Z2V1 217 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 C10orf107Q8IVU9 208 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 PNKDQ8N490 385 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 C11orf42Q8N5U0 333 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 SLC26A10Q8NG04 563 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 OR5M8Q8NGP6 311 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 PIFOQ8TCI5 191 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 AENQ8WTP8 325 aaKnown RBP3.25□□□□□ -1.89
SNHG1-220ENST00000544550 SPRYD4Q8WW59 207 aaPredicted RBP3.25□□□□□ -1.89
SNHG1-220ENST00000544550 CAPSLQ8WWF8 208 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 H1FXQ92522 213 aaKnown RBP3.25□□□□□ -1.89
SNHG1-220ENST00000544550 MPP4Q96JB8 637 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 ZBTB18Q99592 522 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 DNTTIP1Q9H147 329 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 RAD21L1Q9H4I0 556 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 EDA2RQ9HAV5 297 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 INIPQ9NRY2 104 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 ZFP57Q9NU63 452 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 ZDHHC18Q9NUE0 388 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 PTTG3PQ9NZH4 202 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 PSMC3IPQ9P2W1 217 aaPredicted RBP3.25□□□□□ -1.89
SNHG1-220ENST00000544550 ZNF256Q9Y2P7 627 aaPredicted RBP3.25□□□□□ -1.89
SNHG1-220ENST00000544550 CAPN7Q9Y6W3 813 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 PCLOQ9Y6V0 5065 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 NOTCH3Q9UM47 2321 aa3.25□□□□□ -1.89
SNHG1-220ENST00000544550 ARHGAP32A7KAX9 2087 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 IGKV1D-43A0A0B4J1Z2 117 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 A0A1B0GW55 424 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 A6NIZ1 184 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 A6NLC8 198 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 J3KRW8 73 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 COPEO14579 308 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 LDLRAD4O15165 306 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 SERPINB7O75635 380 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 FCN3O75636 299 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 ANP32DO95626 131 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 ZCCHC18P0CG32 403 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 DUX4L2P0CJ85 424 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 DUX4L3P0CJ86 424 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 DUX4L5P0CJ88 424 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 DUX4L6P0CJ89 424 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 DUX4L7P0CJ90 424 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 POU1F1P28069 291 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 NAA10P41227 235 aaPredicted RBP3.24□□□□□ -1.89
SNHG1-220ENST00000544550 INSL3P51460 131 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 DYNLT3P51808 116 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 MVDP53602 400 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 CAV3P56539 151 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 RAP1BP61224 184 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 GNG11P61952 73 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 RPL23AP62750 156 aaKnown RBP3.24□□□□□ -1.89
SNHG1-220ENST00000544550 RAP1AP62834 184 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 FMODQ06828 376 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 RPL18Q07020 188 aaKnown RBP3.24□□□□□ -1.89
SNHG1-220ENST00000544550 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.24□□□□□ -1.89
SNHG1-220ENST00000544550 NPTX1Q15818 432 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 WDR38Q5JTN6 314 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 ARMC4Q5T2S8 1044 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 C8orf74Q6P047 294 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 PLBD1Q6P4A8 553 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 TMEM65Q6PI78 240 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 DUX4L9Q6RFH8 374 aaPredicted RBP3.24□□□□□ -1.89
SNHG1-220ENST00000544550 PGAP1Q75T13 922 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 CPLX4Q7Z7G2 160 aa3.24□□□□□ -1.89
SNHG1-220ENST00000544550 TMEM219Q86XT9 240 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms