RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 COMPP49747 757 aaPredicted RBP6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 TAS2R30P59541 319 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 KIAA0040Q15053 153 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 TAF9Q16594 264 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 MICBQ29980 383 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 PDZD9Q8IXQ8 264 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 NANOGP1Q8N7R0 232 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 SLC30A7Q8NEW0 376 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 FAM131CQ96AQ9 280 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 ORAI1Q96D31 301 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 DNAJB12Q9NXW2 375 aaKnown RBP6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 A4GNTQ9UNA3 340 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 SLC22A13Q9Y226 551 aa6.18□□□□□ -1.42
SRGAP1-206ENST00000543397 CTDSPLO15194 276 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 YIF1AO95070 293 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 PSMB1P20618 241 aaKnown RBP6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 SUB1P53999 127 aaKnown RBP eCLIP6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 DOC2BQ14184 412 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 PHLDA2Q53GA4 152 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 ANKRD39Q53RE8 183 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 SLC22A18ASQ8N1D0 253 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 OR56B4Q8NH76 319 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 SAP25Q8TEE9 199 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 TSNAXQ99598 290 aaKnown RBP6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 ADAT1Q9BUB4 502 aaKnown RBP6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 RTN4RQ9BZR6 473 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 GNB4Q9HAV0 340 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 HSD17B6O14756 317 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 CDC14BO60729 498 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 POU3F3P20264 500 aaPredicted RBP6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 SPCS2Q15005 226 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 RTL8BQ17RB0 113 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 SIGIRRQ6IA17 410 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 SLC23A3Q6PIS1 610 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 CBLN3Q6UW01 205 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 DRAM2Q6UX65 266 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 BEST4Q8NFU0 473 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 ANGPTL6Q8NI99 470 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 MITD1Q8WV92 249 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 OIT3Q8WWZ8 545 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 SLC39A7Q92504 469 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 C12orf57Q99622 126 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 ZNF649Q9BS31 505 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 ELOVL1Q9BW60 279 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 GABARAPL3Q9BY60 117 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 SLC23A1Q9UHI7 598 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 WDR90Q96KV7 1748 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 TRGV10A0A0A0MS01 117 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 CDX4O14627 284 aaPredicted RBP6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 TERTO14746 1132 aaKnown RBP6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 HLA-HP01893 362 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 PMP2P02689 132 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 ADH4P08319 380 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 KLF3P57682 345 aaPredicted RBP6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 CSRP2Q16527 193 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 AARDQ4LEZ3 155 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 CYB5R2Q6BCY4 276 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 H2BFWTQ7Z2G1 175 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 RIMKLAQ8IXN7 391 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 SLC25A45Q8N413 288 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 EDARADDQ8WWZ3 215 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 PP6455Q8WZ26 134 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 CCL17Q92583 94 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 SEH1LQ96EE3 360 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 NRTNQ99748 197 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 DDA1Q9BW61 102 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 HRH4Q9H3N8 390 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 NRXN2Q9P2S2 1712 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 SBF2Q86WG5 1849 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 DOCK5Q9H7D0 1870 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 GHRHP01286 108 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 FAHP16930 419 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 OMGP23515 440 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 NPBWR1P48145 328 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 GNB1P62873 340 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 GNG3P63215 75 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 LSAMPQ13449 338 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 PXDC1Q5TGL8 231 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 LYPD4Q6UWN0 246 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 RNF165Q6ZSG1 346 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 TMPRSS11FQ6ZWK6 438 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 SFTPA2Q8IWL1 248 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 LAX1Q8IWV1 398 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 LGI3Q8N145 548 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 RAB1CQ92928 201 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 ZNF501Q96CX3 271 aaPredicted RBP6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 RBMXL1Q96E39 390 aaKnown RBP6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 ATP6V0BQ99437 205 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 GABARAPL1Q9H0R8 117 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 PPIL3Q9H2H8 161 aaKnown RBP6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 MYOZ1Q9NP98 299 aaPredicted RBP6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 TMEM140Q9NV12 185 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 FBXO34Q9NWN3 711 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 PEMTQ9UBM1 199 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 ATAD5Q96QE3 1844 aa6.17□□□□□ -1.42
SRGAP1-206ENST00000543397 TCRBV16S1A1N1A0A5B0 115 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 C17orf112F2Z3M2 114 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 K7EPK0 472 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 M0QYG6 137 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 MAGEB4O15481 346 aaPredicted RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms