RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 RBBP4Q09028 425 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 RAB40BQ12829 278 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 KIAA0141Q14154 515 aaPredicted RBP3.39□□□□□ -1.87
MDM2-229ENST00000543046 EXT1Q16394 746 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 ZNF74Q16587 644 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 ZSWIM7Q19AV6 140 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 QRICH1Q2TAL8 776 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 GOLGA7BQ2TAP0 167 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 MOGAT2Q3SYC2 334 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 VWA2Q5GFL6 755 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 NCMAPQ5T1S8 102 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 AKR1C8PQ5T2L2 129 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 GLT8D1Q68CQ7 371 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 LEMD1Q68G75 181 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 NCBP2-AS2Q69YL0 99 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 OR8G2PQ6IF36 304 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 OR4A47Q6IF82 309 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 HEPN1Q6WQI6 88 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 B3GLCTQ6Y288 498 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 NDUFAF7Q7L592 441 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 BHLHA15Q7RTS1 189 aaPredicted RBP3.39□□□□□ -1.87
MDM2-229ENST00000543046 C5orf24Q7Z6I8 188 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 ZNF546Q86UE3 836 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 GTSCR1Q86UQ5 136 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 HIST3H2BBQ8N257 126 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 ZNF664Q8N3J9 261 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 RYBPQ8N488 228 aaPredicted RBP3.39□□□□□ -1.87
MDM2-229ENST00000543046 KLHDC1Q8N7A1 406 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 CCDC54Q8NEL0 328 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 OR2M7Q8NG81 312 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 OR4F15Q8NGB8 312 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 OR10G2Q8NGC3 310 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 OR10AD1Q8NGE0 317 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 OR52I1Q8NGK6 324 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 STAG3L4Q8TBR4 150 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 GATAD1Q8WUU5 269 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 BCL2L2Q92843 193 aaPredicted RBP3.39□□□□□ -1.87
MDM2-229ENST00000543046 ATXN7L3BQ96GX2 97 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 YPEL4Q96NS1 127 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 ATOH8Q96SQ7 321 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 ZNF382Q96SR6 550 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 TXN2Q99757 166 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 NKX3-1Q99801 234 aaPredicted RBP3.39□□□□□ -1.87
MDM2-229ENST00000543046 VGLL1Q99990 258 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 CABLES2Q9BTV7 478 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 DOHHQ9BU89 302 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 SNRNP25Q9BV90 132 aaKnown RBP3.39□□□□□ -1.87
MDM2-229ENST00000543046 DDA1Q9BW61 102 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 DUSP16Q9BY84 665 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 POTEKPQ9BYX7 375 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 CHIAQ9BZP6 476 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 COMMD4Q9H0A8 199 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 DEFB129Q9H1M3 183 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 OR2AG1Q9H205 316 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 CLMPQ9H6B4 373 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 HRASLSQ9HDD0 168 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 DNAJC4Q9NNZ3 241 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 TREM1Q9NP99 234 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 TREX1Q9NSU2 369 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 MARCH5Q9NX47 278 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 SPG21Q9NZD8 308 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 DOK5Q9P104 306 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 TRMT112Q9UI30 125 aaKnown RBP3.39□□□□□ -1.87
MDM2-229ENST00000543046 TNFSF18Q9UNG2 199 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 ZFP30Q9Y2G7 519 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 STARD10Q9Y365 291 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 SLCO1B1Q9Y6L6 691 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 KCPQ6ZWJ8 1503 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 ANKRD12Q6UB98 2062 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 PHLPP1O60346 1717 aa3.39□□□□□ -1.87
MDM2-229ENST00000543046 ALPK3Q96L96 1907 aa3.38□□□□□ -1.87
MDM2-229ENST00000543046 TRBV5-5A0A0J9YX44 114 aa3.38□□□□□ -1.87
MDM2-229ENST00000543046 A0A1B0GW64 132 aa3.38□□□□□ -1.87
MDM2-229ENST00000543046 SLC5A10A0PJK1 596 aa3.38□□□□□ -1.87
MDM2-229ENST00000543046 SMCO3A2RU48 225 aa3.38□□□□□ -1.87
MDM2-229ENST00000543046 SNURFLB1AK76 121 aa3.38□□□□□ -1.87
MDM2-229ENST00000543046 GABARAPH6UMI1 98 aa3.38□□□□□ -1.87
MDM2-229ENST00000543046 FOXE1O00358 373 aaPredicted RBP3.38□□□□□ -1.87
MDM2-229ENST00000543046 RFXANKO14593 260 aa3.38□□□□□ -1.87
MDM2-229ENST00000543046 PPP1R2P9O14990 202 aa3.38□□□□□ -1.87
MDM2-229ENST00000543046 NUDT21O43809 227 aaKnown RBP3.38□□□□□ -1.87
MDM2-229ENST00000543046 CYTIPO60759 359 aa3.38□□□□□ -1.87
MDM2-229ENST00000543046 STK16O75716 305 aa3.38□□□□□ -1.87
MDM2-229ENST00000543046 YIF1AO95070 293 aa3.38□□□□□ -1.87
MDM2-229ENST00000543046 ZNF682O95780 498 aa3.38□□□□□ -1.87
MDM2-229ENST00000543046 ACTL6AO96019 429 aa3.38□□□□□ -1.87
MDM2-229ENST00000543046 IFNA6P05013 189 aa3.38□□□□□ -1.87
MDM2-229ENST00000543046 EIF4EP06730 217 aaKnown RBP3.38□□□□□ -1.87
MDM2-229ENST00000543046 CD14P08571 375 aa3.38□□□□□ -1.87
MDM2-229ENST00000543046 FCGR3AP08637 254 aa3.38□□□□□ -1.87
MDM2-229ENST00000543046 IL3P08700 152 aa3.38□□□□□ -1.87
MDM2-229ENST00000543046 ALPIP09923 528 aa3.38□□□□□ -1.87
MDM2-229ENST00000543046 CTXN2P0C2S0 81 aa3.38□□□□□ -1.87
MDM2-229ENST00000543046 NBEAP1P0C6P0 100 aa3.38□□□□□ -1.87
MDM2-229ENST00000543046 RD3LP0DJH9 198 aa3.38□□□□□ -1.87
MDM2-229ENST00000543046 FOLR1P15328 257 aa3.38□□□□□ -1.87
MDM2-229ENST00000543046 PPIBP23284 216 aaKnown RBP3.38□□□□□ -1.87
MDM2-229ENST00000543046 DTYMKP23919 212 aa3.38□□□□□ -1.87
MDM2-229ENST00000543046 CD82P27701 267 aa3.38□□□□□ -1.87
MDM2-229ENST00000543046 PTPN6P29350 595 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms