RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 ANKRD61A6NGH8 418 aa10.34□□□□□ -0.75
DDX55-210ENST00000543016 NDUFS8O00217 210 aa10.34□□□□□ -0.75
DDX55-210ENST00000543016 MLNRO43193 412 aa10.34□□□□□ -0.75
DDX55-210ENST00000543016 LILRA1O75019 489 aa10.34□□□□□ -0.75
DDX55-210ENST00000543016 IGHV4-39P01824 125 aa10.34□□□□□ -0.75
DDX55-210ENST00000543016 CPEP16870 476 aa10.34□□□□□ -0.75
DDX55-210ENST00000543016 FAHP16930 419 aa10.34□□□□□ -0.75
DDX55-210ENST00000543016 ZNF20P17024 532 aa10.34□□□□□ -0.75
DDX55-210ENST00000543016 PCMT1P22061 227 aa10.34□□□□□ -0.75
DDX55-210ENST00000543016 MAPK3P27361 379 aaPredicted RBP10.34□□□□□ -0.75
DDX55-210ENST00000543016 CRYBB2P43320 205 aa10.34□□□□□ -0.75
DDX55-210ENST00000543016 MAP2K4P45985 399 aa10.34□□□□□ -0.75
DDX55-210ENST00000543016 PRDX4Q13162 271 aa10.34□□□□□ -0.75
DDX55-210ENST00000543016 TSTQ16762 297 aaKnown RBP10.34□□□□□ -0.75
DDX55-210ENST00000543016 CEACAM21Q3KPI0 293 aa10.34□□□□□ -0.75
DDX55-210ENST00000543016 Q499Y3 187 aa10.34□□□□□ -0.75
DDX55-210ENST00000543016 SERPINA12Q8IW75 414 aa10.34□□□□□ -0.75
DDX55-210ENST00000543016 ZCCHC24Q8N2G6 241 aaKnown RBP10.34□□□□□ -0.75
DDX55-210ENST00000543016 PARP16Q8N5Y8 322 aa10.34□□□□□ -0.75
DDX55-210ENST00000543016 OR5D14Q8NGL3 314 aa10.34□□□□□ -0.75
DDX55-210ENST00000543016 TSEN15Q8WW01 171 aaKnown RBP10.34□□□□□ -0.75
DDX55-210ENST00000543016 OR5P3Q8WZ94 311 aa10.34□□□□□ -0.75
DDX55-210ENST00000543016 PHYHIPQ92561 330 aa10.34□□□□□ -0.75
DDX55-210ENST00000543016 ITPKCQ96DU7 683 aa10.34□□□□□ -0.75
DDX55-210ENST00000543016 MEGF10Q96KG7 1140 aa10.34□□□□□ -0.75
DDX55-210ENST00000543016 PGLYRP3Q96LB9 341 aa10.34□□□□□ -0.75
DDX55-210ENST00000543016 SOX7Q9BT81 388 aa10.34□□□□□ -0.75
DDX55-210ENST00000543016 TPK1Q9H3S4 243 aa10.34□□□□□ -0.75
DDX55-210ENST00000543016 SLC7A11Q9UPY5 501 aa10.34□□□□□ -0.75
DDX55-210ENST00000543016 DCHS2Q6V1P9 2916 aa10.34□□□□□ -0.75
DDX55-210ENST00000543016 CCDC168Q8NDH2 2452 aa10.33□□□□□ -0.76
DDX55-210ENST00000543016 TRBV5-5A0A0J9YX44 114 aa10.33□□□□□ -0.76
DDX55-210ENST00000543016 LRRC30A6NM36 301 aa10.33□□□□□ -0.76
DDX55-210ENST00000543016 ZNF850A8MQ14 1090 aa10.33□□□□□ -0.76
DDX55-210ENST00000543016 HLA-DPB1P04440 258 aa10.33□□□□□ -0.76
DDX55-210ENST00000543016 OCM2P0CE71 109 aa10.33□□□□□ -0.76
DDX55-210ENST00000543016 HSMCR30P0CW71 290 aa10.33□□□□□ -0.76
DDX55-210ENST00000543016 DAOP14920 347 aa10.33□□□□□ -0.76
DDX55-210ENST00000543016 PRKACBP22694 351 aa10.33□□□□□ -0.76
DDX55-210ENST00000543016 MAGEB1P43366 347 aa10.33□□□□□ -0.76
DDX55-210ENST00000543016 PDLIM4P50479 330 aa10.33□□□□□ -0.76
DDX55-210ENST00000543016 PRSS12P56730 875 aa10.33□□□□□ -0.76
DDX55-210ENST00000543016 TMEM33P57088 247 aa10.33□□□□□ -0.76
DDX55-210ENST00000543016 GNG3P63215 75 aa10.33□□□□□ -0.76
DDX55-210ENST00000543016 CCL8P80075 99 aa10.33□□□□□ -0.76
DDX55-210ENST00000543016 CNN3Q15417 329 aaKnown RBP10.33□□□□□ -0.76
DDX55-210ENST00000543016 ZNF181Q2M3W8 571 aa10.33□□□□□ -0.76
DDX55-210ENST00000543016 HFEQ30201 348 aa10.33□□□□□ -0.76
DDX55-210ENST00000543016 FAM76BQ5HYJ3 339 aa10.33□□□□□ -0.76
DDX55-210ENST00000543016 CLEC2AQ6UVW9 174 aa10.33□□□□□ -0.76
DDX55-210ENST00000543016 DNAAF1Q8NEP3 725 aa10.33□□□□□ -0.76
DDX55-210ENST00000543016 OR10AD1Q8NGE0 317 aa10.33□□□□□ -0.76
DDX55-210ENST00000543016 GTF3AQ92664 365 aaKnown RBP10.33□□□□□ -0.76
DDX55-210ENST00000543016 HPS1Q92902 700 aa10.33□□□□□ -0.76
DDX55-210ENST00000543016 SPSB1Q96BD6 273 aa10.33□□□□□ -0.76
DDX55-210ENST00000543016 FGGYQ96C11 551 aa10.33□□□□□ -0.76
DDX55-210ENST00000543016 PERPQ96FX8 193 aa10.33□□□□□ -0.76
DDX55-210ENST00000543016 OR2V2Q96R30 315 aa10.33□□□□□ -0.76
DDX55-210ENST00000543016 CHODLQ9H9P2 273 aa10.33□□□□□ -0.76
DDX55-210ENST00000543016 FN3KRPQ9HA64 309 aa10.33□□□□□ -0.76
DDX55-210ENST00000543016 FBN2P35556 2912 aa10.32□□□□□ -0.76
DDX55-210ENST00000543016 IGHV1-69-2A0A0G2JMI3 117 aa10.32□□□□□ -0.76
DDX55-210ENST00000543016 TRIM64CA6NLI5 447 aa10.32□□□□□ -0.76
DDX55-210ENST00000543016 F5H5P2 479 aa10.32□□□□□ -0.76
DDX55-210ENST00000543016 GPX5O75715 221 aa10.32□□□□□ -0.76
DDX55-210ENST00000543016 HPXP02790 462 aa10.32□□□□□ -0.76
DDX55-210ENST00000543016 GALP22466 123 aa10.32□□□□□ -0.76
DDX55-210ENST00000543016 GABRA5P31644 462 aa10.32□□□□□ -0.76
DDX55-210ENST00000543016 FUT6P51993 359 aa10.32□□□□□ -0.76
DDX55-210ENST00000543016 RPS11P62280 158 aaKnown RBP eCLIP10.32□□□□□ -0.76
DDX55-210ENST00000543016 MAB21L1Q13394 359 aa10.32□□□□□ -0.76
DDX55-210ENST00000543016 ARMCX4Q5H9R4 360 aa10.32□□□□□ -0.76
DDX55-210ENST00000543016 SYT6Q5T7P8 510 aaPredicted RBP10.32□□□□□ -0.76
DDX55-210ENST00000543016 PLCXD3Q63HM9 321 aa10.32□□□□□ -0.76
DDX55-210ENST00000543016 MOB3CQ70IA8 216 aa10.32□□□□□ -0.76
DDX55-210ENST00000543016 ZNF573Q86YE8 665 aa10.32□□□□□ -0.76
DDX55-210ENST00000543016 PHC2Q8IXK0 858 aa10.32□□□□□ -0.76
DDX55-210ENST00000543016 C1orf87Q8N0U7 546 aa10.32□□□□□ -0.76
DDX55-210ENST00000543016 ZFP41Q8N8Y5 198 aa10.32□□□□□ -0.76
DDX55-210ENST00000543016 OR51A4Q8NGJ6 313 aa10.32□□□□□ -0.76
DDX55-210ENST00000543016 OR11L1Q8NGX0 322 aa10.32□□□□□ -0.76
DDX55-210ENST00000543016 OR10AC1Q8NH08 325 aa10.32□□□□□ -0.76
DDX55-210ENST00000543016 Q8TCH9 128 aa10.32□□□□□ -0.76
DDX55-210ENST00000543016 ITLN1Q8WWA0 313 aa10.32□□□□□ -0.76
DDX55-210ENST00000543016 RGP1Q92546 391 aaPredicted RBP10.32□□□□□ -0.76
DDX55-210ENST00000543016 TMEM106AQ96A25 262 aa10.32□□□□□ -0.76
DDX55-210ENST00000543016 CPNE2Q96FN4 548 aaPredicted RBP10.32□□□□□ -0.76
DDX55-210ENST00000543016 RNF170Q96K19 258 aa10.32□□□□□ -0.76
DDX55-210ENST00000543016 OPALINQ96PE5 141 aa10.32□□□□□ -0.76
DDX55-210ENST00000543016 ZCCHC4Q9H5U6 513 aa10.32□□□□□ -0.76
DDX55-210ENST00000543016 CKLFQ9UBR5 152 aa10.32□□□□□ -0.76
DDX55-210ENST00000543016 PPP1R3CQ9UQK1 317 aa10.32□□□□□ -0.76
DDX55-210ENST00000543016 LRP5LA4QPB2 252 aa10.31□□□□□ -0.76
DDX55-210ENST00000543016 MAGEA13PA6NCF6 341 aa10.31□□□□□ -0.76
DDX55-210ENST00000543016 ZNF879B4DU55 563 aa10.31□□□□□ -0.76
DDX55-210ENST00000543016 H0YL77 283 aa10.31□□□□□ -0.76
DDX55-210ENST00000543016 CCRL2O00421 344 aa10.31□□□□□ -0.76
DDX55-210ENST00000543016 SSX4O60224 188 aa10.31□□□□□ -0.76
DDX55-210ENST00000543016 NCR1O76036 304 aa10.31□□□□□ -0.76
DDX55-210ENST00000543016 FSTL3O95633 263 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms