RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 SYT13Q7L8C5 426 aa7.31□□□□□ -1.24
PRKAB1-207ENST00000542698 WDSUB1Q8N9V3 476 aa7.31□□□□□ -1.24
PRKAB1-207ENST00000542698 NOXO1Q8NFA2 376 aa7.31□□□□□ -1.24
PRKAB1-207ENST00000542698 OR51B6Q9H340 312 aa7.31□□□□□ -1.24
PRKAB1-207ENST00000542698 ZNF576Q9H609 170 aa7.31□□□□□ -1.24
PRKAB1-207ENST00000542698 MMP26Q9NRE1 261 aa7.31□□□□□ -1.24
PRKAB1-207ENST00000542698 RASL12Q9NYN1 266 aa7.31□□□□□ -1.24
PRKAB1-207ENST00000542698 ZNF230Q9UIE0 474 aaPredicted RBP7.31□□□□□ -1.24
PRKAB1-207ENST00000542698 ANGPTL7O43827 346 aa7.31□□□□□ -1.24
PRKAB1-207ENST00000542698 ABHD16AO95870 558 aa7.31□□□□□ -1.24
PRKAB1-207ENST00000542698 NRASP01111 189 aa7.31□□□□□ -1.24
PRKAB1-207ENST00000542698 H2AFB1P0C5Y9 115 aa7.31□□□□□ -1.24
PRKAB1-207ENST00000542698 APLNRP35414 380 aa7.31□□□□□ -1.24
PRKAB1-207ENST00000542698 TAGLN2P37802 199 aaKnown RBP7.31□□□□□ -1.24
PRKAB1-207ENST00000542698 OR2B8PP59922 312 aa7.31□□□□□ -1.24
PRKAB1-207ENST00000542698 SP6Q3SY56 376 aa7.31□□□□□ -1.24
PRKAB1-207ENST00000542698 RGS7BPQ6MZT1 257 aaPredicted RBP7.31□□□□□ -1.24
PRKAB1-207ENST00000542698 RPS4Y2Q8TD47 263 aa7.31□□□□□ -1.24
PRKAB1-207ENST00000542698 AKR1E2Q96JD6 320 aa7.31□□□□□ -1.24
PRKAB1-207ENST00000542698 PRRX2Q99811 253 aa7.31□□□□□ -1.24
PRKAB1-207ENST00000542698 ANKRD10Q9NXR5 420 aa7.31□□□□□ -1.24
PRKAB1-207ENST00000542698 TRPM7Q96QT4 1865 aa7.31□□□□□ -1.24
PRKAB1-207ENST00000542698 ASXL3Q9C0F0 2248 aa7.31□□□□□ -1.24
PRKAB1-207ENST00000542698 IGHV1OR21-1A0A087WYE8 117 aa7.31□□□□□ -1.24
PRKAB1-207ENST00000542698 XRCC2O43543 280 aa7.31□□□□□ -1.24
PRKAB1-207ENST00000542698 PNPP00491 289 aa7.31□□□□□ -1.24
PRKAB1-207ENST00000542698 RAC2P15153 192 aa7.31□□□□□ -1.24
PRKAB1-207ENST00000542698 BTCP35070 178 aa7.31□□□□□ -1.24
PRKAB1-207ENST00000542698 ZP1P60852 638 aa7.31□□□□□ -1.24
PRKAB1-207ENST00000542698 RBMXL1Q96E39 390 aaKnown RBP7.31□□□□□ -1.24
PRKAB1-207ENST00000542698 SCARF2Q96GP6 870 aaPredicted RBP7.31□□□□□ -1.24
PRKAB1-207ENST00000542698 OCSTAMPQ9BR26 566 aa7.31□□□□□ -1.24
PRKAB1-207ENST00000542698 FN3KRPQ9HA64 309 aa7.31□□□□□ -1.24
PRKAB1-207ENST00000542698 SOCS1O15524 211 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 VSIG8P0DPA2 414 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 HLA-DOBP13765 273 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 OR3A4PP47883 348 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 GSK3AP49840 483 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 UBE2NP61088 152 aaKnown RBP7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 RPS11P62280 158 aaKnown RBP eCLIP7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 PPIAP62937 165 aaKnown RBP7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 EXT1Q16394 746 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 DPPA2Q7Z7J5 298 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 BATF2Q8N1L9 274 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 ZNF561Q8N587 486 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 SLC26A10Q8NG04 563 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 SGK3Q96BR1 496 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 SPACA9Q96E40 222 aaPredicted RBP7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 NELFAQ9H3P2 528 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 FANCFQ9NPI8 374 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 DNAJB11Q9UBS4 358 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 TNFSF18Q9UNG2 199 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 YBX2Q9Y2T7 364 aaKnown RBP7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 FAM96BQ9Y3D0 163 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 URGCP-MRPS24S4R325 110 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 TRBV5-7A0A0A0MS05 114 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 LAMTOR5O43504 91 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 PIAS2O75928 621 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 THBS4P35443 961 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 AKR1C3P42330 323 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 MRPS34P82930 218 aaKnown RBP7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 ZNF273Q14593 569 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 EIF2S3LQ2VIR3 472 aaKnown RBP7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 CLEC18BQ6UXF7 455 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 TMEM182Q6ZP80 229 aaPredicted RBP7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 IL22RA1Q8N6P7 574 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 OR5AP2Q8NGF4 316 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 MCHR2Q969V1 340 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 PTX4Q96A99 478 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 KIRREL1Q96J84 757 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 SHARPINQ9H0F6 387 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 TMEM74BQ9NUR3 256 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 NOSIPQ9Y314 301 aaKnown RBP7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 CACNA1DQ01668 2161 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 MED12Q93074 2177 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 IGHV3-15A0A0B4J1V0 119 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 SMCO3A2RU48 225 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 CDC14BO60729 498 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 DXOO77932 396 aaKnown RBP7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 HPNP05981 417 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 CD63P08962 238 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 TCN2P20062 427 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 ROM1Q03395 351 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 KIAA0141Q14154 515 aaPredicted RBP7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 ZNF345Q14585 488 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 TMEM255AQ5JRV8 349 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 AADACL3Q5VUY0 350 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 TMEM268Q5VZI3 342 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 YRDCQ86U90 279 aaKnown RBP7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 OR10G3Q8NGC4 313 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 OR1J1Q8NGS3 322 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 RNF133Q8WVZ7 376 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 NANOS1Q8WY41 292 aaKnown RBP7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 SAT2Q96F10 170 aaPredicted RBP7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 ZNF426Q9BUY5 554 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 UQCC1Q9NVA1 299 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 ST3GAL6Q9Y274 331 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 STRAPQ9Y3F4 350 aaKnown RBP7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 DNAJC13O75165 2243 aa7.3□□□□□ -1.24
PRKAB1-207ENST00000542698 IGKV1D-42A0A075B6H8 117 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms