RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 SYT6Q5T7P8 510 aaPredicted RBP2.59□□□□□ -1.99
USP28-210ENST00000542033 LGSNQ5TDP6 509 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 HIST2H3PS2Q5TEC6 136 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 REEP3Q6NUK4 255 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 ZNF836Q6ZNA1 936 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 Q6ZPB1 254 aaPredicted RBP2.59□□□□□ -1.99
USP28-210ENST00000542033 ABHD13Q7L211 337 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 SSX7Q7RTT5 188 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 MRPL21Q7Z2W9 205 aaKnown RBP2.59□□□□□ -1.99
USP28-210ENST00000542033 NAA40Q86UY6 237 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 SLC25A42Q86VD7 318 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 SLC47A2Q86VL8 602 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 KCNMB4Q86W47 210 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 PARGQ86W56 976 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 PAQR7Q86WK9 346 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 MFSD6LQ8IWD5 586 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 ZFP82Q8N141 532 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 LRRC75A-AS1Q8N1F1 130 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 LRRC52Q8N7C0 313 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 POM121L12Q8N7R1 296 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 YIPF7Q8N8F6 280 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 C4orf32Q8N8J7 132 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 ZNF557Q8N988 423 aaPredicted RBP2.59□□□□□ -1.99
USP28-210ENST00000542033 PXT1Q8NFP0 134 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 OR11H1Q8NG94 326 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 OR10H4Q8NGA5 316 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 OR4F17Q8NGA8 305 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 OR4F15Q8NGB8 312 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 OR9K2Q8NGE7 335 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 OR10W1Q8NGF6 305 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 OR5L2Q8NGL0 311 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 OR11H2Q8NH07 326 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 OR8U1Q8NH10 309 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 OR5K1Q8NHB7 308 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 CACNG8Q8WXS5 425 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 TMEM234Q8WY98 164 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 ARNTL2Q8WYA1 636 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 GHSRQ92847 366 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 SMARCD2Q92925 531 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 ART4Q93070 314 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 TOMM40LQ969M1 308 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 BIRC7Q96CA5 298 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 COQ2Q96H96 371 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 PPP1R16AQ96I34 528 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 RCHY1Q96PM5 261 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 RNF157Q96PX1 679 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 OR4F4Q96R69 305 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 VAT1Q99536 393 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 KLF6Q99612 283 aaPredicted RBP2.59□□□□□ -1.99
USP28-210ENST00000542033 FAM173AQ9BQD7 235 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 VPS25Q9BRG1 176 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 NICN1Q9BSH3 213 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 TMEM43Q9BTV4 400 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 PRRG3Q9BZD7 231 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 SLC25A51Q9H1U9 297 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 PORCNQ9H237 461 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 PTGES2Q9H7Z7 377 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 TUBA4BQ9H853 241 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 MOB1AQ9H8S9 216 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 ELL3Q9HB65 397 aaPredicted RBP2.59□□□□□ -1.99
USP28-210ENST00000542033 RHOFQ9HBH0 211 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 EML4Q9HC35 981 aaKnown RBP2.59□□□□□ -1.99
USP28-210ENST00000542033 HRASLSQ9HDD0 168 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 SLCO1B3Q9NPD5 702 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 SLC2A9Q9NRM0 540 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 SLC7A10Q9NS82 523 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 SCN3BQ9NY72 215 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 RASL12Q9NYN1 266 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 PIPOXQ9P0Z9 390 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 DHCR7Q9UBM7 475 aaKnown RBP2.59□□□□□ -1.99
USP28-210ENST00000542033 SEC14L3Q9UDX4 400 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 CRLS1Q9UJA2 301 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 POMPQ9Y244 141 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 ZFP30Q9Y2G7 519 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 EXOSC1Q9Y3B2 195 aaKnown RBP2.59□□□□□ -1.99
USP28-210ENST00000542033 NPTNQ9Y639 398 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 ALG6Q9Y672 507 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 V9GYS6 101 aa2.59□□□□□ -1.99
USP28-210ENST00000542033 ZCCHC11Q5TAX3 1644 aaKnown RBP2.59□□□□□ -1.99
USP28-210ENST00000542033 PPLO60437 1756 aa2.59□□□□□ -2
USP28-210ENST00000542033 ATAD5Q96QE3 1844 aa2.58□□□□□ -2
USP28-210ENST00000542033 MYO5BQ9ULV0 1848 aa2.58□□□□□ -2
USP28-210ENST00000542033 MYO5AQ9Y4I1 1855 aaKnown RBP2.58□□□□□ -2
USP28-210ENST00000542033 NFAT5O94916 1531 aa2.58□□□□□ -2
USP28-210ENST00000542033 AGLP35573 1532 aa2.58□□□□□ -2
USP28-210ENST00000542033 UGGT1Q9NYU2 1555 aa2.58□□□□□ -2
USP28-210ENST00000542033 TRAV8-7A0A075B6U6 113 aa2.58□□□□□ -2
USP28-210ENST00000542033 KCNE1BA0A087WTH5 132 aa2.58□□□□□ -2
USP28-210ENST00000542033 GLYATL1P3A0A0U1RQE8 302 aa2.58□□□□□ -2
USP28-210ENST00000542033 KLF18A0A0U1RQI7 1052 aa2.58□□□□□ -2
USP28-210ENST00000542033 A0A1B0GVI7 797 aa2.58□□□□□ -2
USP28-210ENST00000542033 A0A1W2PPR1 153 aa2.58□□□□□ -2
USP28-210ENST00000542033 IGLON5A6NGN9 336 aa2.58□□□□□ -2
USP28-210ENST00000542033 CLDN24A6NM45 220 aa2.58□□□□□ -2
USP28-210ENST00000542033 SEC14L6B5MCN3 397 aa2.58□□□□□ -2
USP28-210ENST00000542033 RNASEK-C17orf49H0YIS7 233 aa2.58□□□□□ -2
USP28-210ENST00000542033 GOSR2O14653 212 aa2.58□□□□□ -2
USP28-210ENST00000542033 CASKO14936 926 aa2.58□□□□□ -2
USP28-210ENST00000542033 CYB5BO43169 146 aa2.58□□□□□ -2
USP28-210ENST00000542033 EMC8O43402 210 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms