RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 REPIN1Q9BWE0 567 aaKnown RBP23.91■■□□□ 1.42
CCM2-218ENST00000541586 SRRQ9GZT4 340 aa23.91■■□□□ 1.42
CCM2-218ENST00000541586 METTL17Q9H7H0 456 aaPredicted RBP23.91■■□□□ 1.42
CCM2-218ENST00000541586 NPAP1Q9NZP6 1156 aa23.91■■□□□ 1.42
CCM2-218ENST00000541586 ETV7Q9Y603 341 aa23.91■■□□□ 1.42
CCM2-218ENST00000541586 TALDO1P37837 337 aa23.9■■□□□ 1.42
CCM2-218ENST00000541586 SCAND1P57086 179 aa23.9■■□□□ 1.42
CCM2-218ENST00000541586 FAM3DQ96BQ1 224 aa23.9■■□□□ 1.42
CCM2-218ENST00000541586 SLC25A38Q96DW6 304 aa23.9■■□□□ 1.42
CCM2-218ENST00000541586 TBCCD1Q9NVR7 557 aa23.9■■□□□ 1.42
CCM2-218ENST00000541586 UPK1BO75841 260 aa23.9■■□□□ 1.42
CCM2-218ENST00000541586 AZGP1P25311 298 aaKnown RBP23.9■■□□□ 1.42
CCM2-218ENST00000541586 DMRTC1Q5HYR2 192 aa23.9■■□□□ 1.42
CCM2-218ENST00000541586 RFPL4BQ6ZWI9 263 aa23.9■■□□□ 1.42
CCM2-218ENST00000541586 SPACA5Q96QH8 159 aa23.9■■□□□ 1.42
CCM2-218ENST00000541586 SPOCK3Q9BQ16 436 aa23.9■■□□□ 1.42
CCM2-218ENST00000541586 UQCC2Q9BRT2 126 aa23.9■■□□□ 1.42
CCM2-218ENST00000541586 POFUT1Q9H488 388 aa23.9■■□□□ 1.42
CCM2-218ENST00000541586 PPP1R3EQ9H7J1 279 aa23.9■■□□□ 1.42
CCM2-218ENST00000541586 CNTD2Q9H8S5 307 aa23.9■■□□□ 1.42
CCM2-218ENST00000541586 CDH20Q9HBT6 801 aa23.9■■□□□ 1.42
CCM2-218ENST00000541586 PTTG3PQ9NZH4 202 aa23.9■■□□□ 1.42
CCM2-218ENST00000541586 USP9YO00507 2555 aaPredicted RBP23.89■■□□□ 1.42
CCM2-218ENST00000541586 ALX3O95076 343 aa23.89■■□□□ 1.41
CCM2-218ENST00000541586 POU3F4P49335 361 aa23.89■■□□□ 1.41
CCM2-218ENST00000541586 IL18Q14116 193 aa23.89■■□□□ 1.41
CCM2-218ENST00000541586 RNF144BQ7Z419 303 aa23.89■■□□□ 1.41
CCM2-218ENST00000541586 CMTM4Q8IZR5 234 aa23.89■■□□□ 1.41
CCM2-218ENST00000541586 DTX3Q8N9I9 347 aa23.89■■□□□ 1.41
CCM2-218ENST00000541586 OR4D6Q8NGJ1 314 aa23.89■■□□□ 1.41
CCM2-218ENST00000541586 OR51B6Q9H340 312 aa23.89■■□□□ 1.41
CCM2-218ENST00000541586 NGBQ9NPG2 151 aa23.89■■□□□ 1.41
CCM2-218ENST00000541586 MAGEB3O15480 346 aa23.88■■□□□ 1.41
CCM2-218ENST00000541586 ALDOBP05062 364 aa23.88■■□□□ 1.41
CCM2-218ENST00000541586 HCKP08631 526 aa23.88■■□□□ 1.41
CCM2-218ENST00000541586 OCMP0CE72 109 aaPredicted RBP23.88■■□□□ 1.41
CCM2-218ENST00000541586 COX6B1P14854 86 aa23.88■■□□□ 1.41
CCM2-218ENST00000541586 ZNF93P35789 620 aaPredicted RBP23.88■■□□□ 1.41
CCM2-218ENST00000541586 HLXQ14774 488 aaPredicted RBP23.88■■□□□ 1.41
CCM2-218ENST00000541586 C2orf76Q3KRA6 126 aa23.88■■□□□ 1.41
CCM2-218ENST00000541586 MRPL21Q7Z2W9 205 aaKnown RBP23.88■■□□□ 1.41
CCM2-218ENST00000541586 CCDC32Q9BV29 185 aa23.88■■□□□ 1.41
CCM2-218ENST00000541586 KCNK15Q9H427 330 aa23.88■■□□□ 1.41
CCM2-218ENST00000541586 ABCB10Q9NRK6 738 aa23.88■■□□□ 1.41
CCM2-218ENST00000541586 LOC100289279A0A1B0GTE1 492 aa23.87■■□□□ 1.41
CCM2-218ENST00000541586 IGLV1-44P01699 117 aa23.87■■□□□ 1.41
CCM2-218ENST00000541586 PTBP1P26599 531 aaKnown RBP eCLIP23.87■■□□□ 1.419e-9■■■■■ 35.7
CCM2-218ENST00000541586 PLA2G7Q13093 441 aa23.87■■□□□ 1.41
CCM2-218ENST00000541586 PYDC2Q56P42 97 aa23.87■■□□□ 1.41
CCM2-218ENST00000541586 CDH26Q8IXH8 852 aa23.87■■□□□ 1.41
CCM2-218ENST00000541586 SYNPRQ8TBG9 265 aa23.87■■□□□ 1.41
CCM2-218ENST00000541586 NPRL2Q8WTW4 380 aa23.87■■□□□ 1.41
CCM2-218ENST00000541586 FAM222BQ8WU58 562 aa23.87■■□□□ 1.41
CCM2-218ENST00000541586 ABCG5Q9H222 651 aa23.87■■□□□ 1.41
CCM2-218ENST00000541586 GPR173Q9NS66 373 aa23.87■■□□□ 1.41
CCM2-218ENST00000541586 EIF3KQ9UBQ5 218 aaKnown RBP23.87■■□□□ 1.41
CCM2-218ENST00000541586 ANKHD1Q8IWZ3 2542 aaKnown RBP23.87■■□□□ 1.41
CCM2-218ENST00000541586 ICMTO60725 284 aa23.87■■□□□ 1.41
CCM2-218ENST00000541586 PRF1P14222 555 aa23.87■■□□□ 1.41
CCM2-218ENST00000541586 CLVS2Q5SYC1 327 aa23.87■■□□□ 1.41
CCM2-218ENST00000541586 TMEM42Q69YG0 159 aa23.87■■□□□ 1.41
CCM2-218ENST00000541586 SSX8Q7RTT4 187 aa23.87■■□□□ 1.41
CCM2-218ENST00000541586 FAM169BQ8N8A8 192 aa23.87■■□□□ 1.41
CCM2-218ENST00000541586 OR5L1Q8NGL2 311 aa23.87■■□□□ 1.41
CCM2-218ENST00000541586 A0A0G2JMP0 313 aa23.86■■□□□ 1.41
CCM2-218ENST00000541586 A0A0X1KG70 313 aa23.86■■□□□ 1.41
CCM2-218ENST00000541586 J3QW42 95 aa23.86■■□□□ 1.41
CCM2-218ENST00000541586 GMDSO60547 372 aa23.86■■□□□ 1.41
CCM2-218ENST00000541586 ARSBP15848 533 aa23.86■■□□□ 1.41
CCM2-218ENST00000541586 ART1P52961 327 aa23.86■■□□□ 1.41
CCM2-218ENST00000541586 ZNF181Q2M3W8 571 aa23.86■■□□□ 1.41
CCM2-218ENST00000541586 SEZ6L2Q6UXD5 910 aa23.86■■□□□ 1.41
CCM2-218ENST00000541586 GDPD1Q8N9F7 314 aa23.86■■□□□ 1.41
CCM2-218ENST00000541586 ACBD4Q8NC06 268 aa23.86■■□□□ 1.41
CCM2-218ENST00000541586 OR4M2Q8NGB6 313 aa23.86■■□□□ 1.41
CCM2-218ENST00000541586 PLPPR2Q96GM1 343 aa23.86■■□□□ 1.41
CCM2-218ENST00000541586 OPA3Q9H6K4 179 aa23.86■■□□□ 1.41
CCM2-218ENST00000541586 C14orf119Q9NWQ9 140 aa23.86■■□□□ 1.41
CCM2-218ENST00000541586 RHBDL2Q9NX52 303 aa23.86■■□□□ 1.41
CCM2-218ENST00000541586 PKDREJQ9NTG1 2253 aa23.86■■□□□ 1.41
CCM2-218ENST00000541586 IGHV1-18A0A0C4DH31 117 aa23.85■■□□□ 1.41
CCM2-218ENST00000541586 ZNF816-ZNF321PA0A0X1KG74 233 aa23.85■■□□□ 1.41
CCM2-218ENST00000541586 SMPD2O60906 423 aa23.85■■□□□ 1.41
CCM2-218ENST00000541586 CECR9P0C854 216 aa23.85■■□□□ 1.41
CCM2-218ENST00000541586 PITPNBP48739 271 aa23.85■■□□□ 1.41
CCM2-218ENST00000541586 RIN1Q13671 783 aa23.85■■□□□ 1.41
CCM2-218ENST00000541586 ZBTB37Q5TC79 503 aa23.85■■□□□ 1.41
CCM2-218ENST00000541586 HIST2H2BCQ6DN03 193 aa23.85■■□□□ 1.41
CCM2-218ENST00000541586 OR56B2PQ8NGI1 322 aa23.85■■□□□ 1.41
CCM2-218ENST00000541586 TMEM272A0A1B0GTI8 110 aa23.84■■□□□ 1.41
CCM2-218ENST00000541586 EFNB2P52799 333 aa23.84■■□□□ 1.41
CCM2-218ENST00000541586 OR8H2Q8N162 312 aa23.84■■□□□ 1.41
CCM2-218ENST00000541586 UBASH3BQ8TF42 649 aa23.84■■□□□ 1.41
CCM2-218ENST00000541586 RAB40AQ8WXH6 277 aa23.84■■□□□ 1.41
CCM2-218ENST00000541586 PIK3IP1Q96FE7 263 aa23.84■■□□□ 1.41
CCM2-218ENST00000541586 NRASP01111 189 aa23.84■■□□□ 1.41
CCM2-218ENST00000541586 FAM157BP0CG42 384 aa23.84■■□□□ 1.41
CCM2-218ENST00000541586 KISS1Q15726 138 aa23.84■■□□□ 1.41
CCM2-218ENST00000541586 BAK1Q16611 211 aa23.84■■□□□ 1.41
CCM2-218ENST00000541586 STEAP3Q658P3 488 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms